Pogoniulus pusillus (red-fronted tinkerbird): 135173720
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Entry
135173720 CDS
T10504
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus02010
ABC transporters
ppus04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135173720 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135173720 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppus02000
]
135173720 (ABCA1)
Transporters [BR:
ppus02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
135173720 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
135173720
NCBI-ProteinID:
XP_063996938
LinkDB
All DBs
Position
Z:87764900..87870622
Genome browser
AA seq
2262 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGVVGNFNASIVSRLFSDAKRLLLYSQQDT
SIKDVQKVLGKLRKLENSSVSDLKLRNFLVENETFSDFLHRNLSMPSAAVGELLDADINL
RQVLVSGYRMRLRDFCHNSTLSEFLTIQNRTVAADSETFICTLPKEKLDAAEQAFRANLN
PLKPLQGQLSFNSSLQDLSETVETLRDSLGRLVQELLSMKSWSDMRQEVMFLTNVNASDS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNNTEDDVTNFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPATRKVMSEVNRTFQELGVFRDLGGMW
EEISPKIWMFMESSQEMDLIRTLLKGKALWDLHLPASNWTVEDVARFLSKHPEDLETANG
SVYTWVDAFNETDRAIQTISRFMECVNLDKLEPVATEVRLINKSLELLDERRFWAGIVFS
EIAPNSLELPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDV
VEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFVSSLIPLLMSAGLLVLILKVGNLLPYSDPSVVF
VFLSIFAVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDYISFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWNNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEDPHERQHPHPDQKGPSEVCKEEEPVHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSAIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMVTDV
GLPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNHLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLAISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDALDPNDSDIDPAESRETDLLSGMDGKGSYQL
KGWKLTQQQFMALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYDEQYTFISNDAPEDAGTQKLLDALLNKPGFGTRCMQGHSIPNTPCTVGQTEWTTT
SVPDSVLHIFLKGNWSMENPSPSCECSNEKIKKMLPVCPPGAGGLPPPQREQDTADILQN
LTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLMLPPSHEVTDAIKRVK
KILELAQGSSGDRFLTSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVMNNAILRANLQ
QDKNPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPVLA
LLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPMSWDLVGRNLFAMAVE
GAVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTK
IYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILS
NIQEVHQNMGYCPQFDAVNDLLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGE
KYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFF
GHAFPGSVLKEKHRNMLQYQLPSSPSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHPKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagttgggcttgctgctatggaagaacttcacgtacagaagacga
cagactttccagctgctgatagaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctacgaacagcatgaatgtcactttccaaacaaagct
atgccttcagcaggaaccttgccatggatacaggggatcatctgcaatgccaacaaccct
tgttttcgctacccaactcctggggaatctcctggtgttgttggaaacttcaatgcctct
attgtttcccgcctgttctcggatgccaagaggttactcttgtacagccaacaggacaca
agcataaaggatgttcagaaggtcctgggaaaactgcgcaagctggaaaactcctctgtc
tcagatctgaaacttcggaatttcctggttgaaaacgagaccttctcagacttcctccat
cgtaatttgtccatgccgtcagctgcagtgggggagctactggatgcagacatcaacctc
cggcaggtccttgtgtctgggtaccgaatgagactgcgagatttctgccacaactcgacg
ctgtccgagttccttacgatccagaatcggacagtggccgcggactctgaaaccttcatt
tgcactttgccaaaggaaaaactcgatgcagccgaacaagccttccgtgctaacctgaac
ccactgaagccccttcagggacaactttctttcaattcctccttacaagatctgtcagaa
actgtggaaactttgagagacagccttgggagacttgttcaagagttgctgagcatgaag
agctggagtgatatgaggcaagaggtgatgttcctgaccaacgtgaatgcctcagactcc
tccacacagatctaccaggctgtgtcacgcattgtgtgtggccatcctgaaggcggaggt
ctcaaaattaagtccctcaactggtatgaggataacaattacaaagcactgtttggaggc
aacaacactgaagacgatgtgactaacttctatgataactccacaacaccctactgcaat
gagctgatgaagaacctggagtccagcccgctttccaggattatctggagggctttgaaa
cctttactgattgggaagatcttgtacaccccagatacaccagccacaaggaaggtcatg
agtgaggtgaacaggacattccaggagctgggtgtgtttcgtgacctcggggggatgtgg
gaggagatcagcccgaagatttggatgtttatggaaagtagtcaggaaatggatctcatt
cggacgctgctgaagggcaaagctctctgggacctgcacttgccagcttccaactggaca
gtggaggatgttgcccgtttcctatcaaaacatccagaggaccttgagacagcaaatggc
tcagtgtatacctgggtagatgccttcaatgaaacagaccgggctatccagaccatctcc
cgcttcatggagtgtgtcaacttggacaaactggagcctgtggccacagaagtccgtctt
ataaacaagtccttggagcttctggatgaaagaaggttctgggctggcatagtcttctct
gaaatagcccctaacagcttagaactccctcaacatgtgaaatacaagatacgcatggac
attgataatgtggaaaggaccaacaagatcaaggatgggtactgggatcctggtccccgt
gctgacccatttgaggacatgcgctatgtctggggaggctttgcctacctgcaggatgta
gtggagcaggccatcatcagggtgcagacaggcacggagaagaaaacaggagtttatgta
cagcagatgccctacccttgttatgtggatgacatatttcttcgtgtcatgagccgctct
atgcctctcttcatgactctagcctggatctattcagtggctgtgataattaagggcatt
gtgtatgagaaggaagcccgtctaaaggagacgatgaggattatgggacttgacaatggc
atcctttggctaagctggtttgttagcagcctcatccctctcttgatgagtgcaggcctg
ctggtgctgatcctcaaggtgggaaatctgctgccttacagcgaccctagtgtggtgttt
gttttcctctcgatttttgctgttgtgaccatcctgcagtgcttcctcatcagcactgtg
ttctccagggccaacctggcagctgcctgtggaggcattgtctatttcacactgtacctg
ccttatgtgctgtgtgtcgcctggcaggactatatcagcttctcactcaagatctttgcg
agcctactgtctccagtagcctttggctttggttgtgagtactttgcactgtttgaggag
cagggagttggtgttcaatggaacaacttctttgagagcccgttggaagaagatggtttt
agcatcaccacatctgctgtcatgatgttgtttgacactttcctgtatggggtcatgacc
tggtacatcgagtctgtgtttccaggccagtatgggattcccaggccctggtattttcct
tttacaaagtcttactggtttggtgaggacccacatgaaaggcagcaccctcatcctgac
cagaaagggccttcagaagtctgcaaggaggaagagcctgtgcatctgagccttggtgtt
tctatccagaatctggtcaaagtttaccgtgatggcaagaaagttgctgtagatggtctc
acgctcaacttctatgaaggacaaatcacctcctttctgggacataatggagcagggaaa
accactaccatgtccatcttgactggcttgtttcctccaacctcgggtacagccttcatc
ctgggcaaagatatccgctctgagctcagtgccatcagacagaacctgggagtctgtcca
caacataatgtgttgtttgacttgctaactgtggaggagcacatctggttctacgctcgc
cttaaagggctgccagaaaagaaggtgaaagaggagatggagcagatggtaacagatgtt
ggtttgcctcacaaactgaaggctaggacaagcaaactctctggtggcatgcagaggaag
ctctccgttgctttagcctttgttggtggctctaaggttgtcattctagatgagcctaca
gctggggtggatccttattctcgcagagggatatgggagttgctgctgaagtatcggcaa
ggccgcactatcattctctccactcaccatatggatgaggcagacattctgggtgaccgg
attgccataatttctcatggcaagctctgctgtgttggctcttctctctttttgaagaac
catctgggaacaggctattatttgaccctggtaaagaaggatgtggactcttccctgagc
tcctgccgaaacagcagcagcacagtgtcctacctgaaaaaggatgacagtgtctctcag
agcagttctgatgctggccttggcagtgaccatgaaagtgacacactgacaatagatgtt
tctgcaatttcaaatctcattacaaaacatgttcctgaggccaggctggtggaggacatt
ggccatgaattaacctatgtcttgccatacaaagctgctaaagagggagcttttgtggag
ctgttccatgaaatcgacgaccgtctttctgatcttgccatttccagctatggcatctct
gaaaccacactggaggagatcttcctgaaagtggctgatgatagtggtgtggatgcagaa
acctcagatggaacactgccagccagaagaaacagacgtgtgtttggagacaggcagagc
tgccttcgtccatttacagaagatgatgcattagatcctaatgattcagatatagaccca
gcagaatccagggagacagaccttctcagtggcatggatgggaaaggctcctaccagctg
aagggctggaagctcacccagcagcagttcatggcattgttgtggaagaggctgctgatt
gccaagagaagccggaagggtttctttgctcagattgtgctgccagctgtctttgtgtgt
attgcactcatgttcagcctaattgttcctccctttggaaagtatcccagcctggaatta
cagccctggatgtatgatgaacagtacacctttattagcaatgatgctccagaagatgca
ggtactcagaagcttttggatgcccttctcaataagcctggttttgggacacgctgtatg
cagggtcactccatcccaaacactccttgcaccgtgggtcagacagaatggaccacgact
tcagtcccagactcagtcctgcacatcttcttgaaaggcaactggagcatggagaaccct
tccccttcttgtgagtgcagcaatgagaagatcaagaagatgctacctgtgtgtcctcct
ggtgcaggcgggctgccacctccacagcgtgagcaagacactgctgacatcctccagaac
ctaacaggccgcaatatatcggactacctggtgaagacctacgcacagatcattgggaag
agcttaaagaataagatctgggtgaatgagttcaggtatggtggcttttccttgggagcc
agcagttcccttatgcttcctcccagccatgaagtcactgatgccattaaacgtgtcaag
aaaatcttggagctagcacagggaagttctggagatcggtttcttaccagcttgtcgagt
ttcatgaaaggcctggatacaaagaacaacgtgaaggtgtggttcaacaacaaaggctgg
catgccattgcctccttcctgaacgtgatgaacaatgccatccttcgggccaacttgcag
caggacaaaaacccaagtgcttacggtatcactgccttcaatcacccactcaacctcacc
aagcaacagctctccgaagtggccttgatgaccacttctgtggatgtcctagtctccatc
tgtgtgatctttgccatgtcctttgtccctgccagctttgtggtcttccttatccaggaa
cgtgtcagcaaggctaagcacttgcagttcattagtggtgtgaagcctgtgatctactgg
ctggccaactttgtctgggatatgtgcaactacattgttccagccacactagtcatcatc
atcttcatctgcttccagcagaagtcttatgtatcctcctccaacttgcctgtgctggct
ctccttctgtttctttatgggtggtccatcacccctctcatgtatccagcctcctttgtg
tttaaaatccctagcacagcatatgttgtgctgaccagtgtgaacctcttcattggcatc
aatggtagtgtggccaccttcgtcctggagctcttcaccaacaacaagctgaataacatc
aatgatatcctgaaatcggttttcctcatcttcccccacttctgcctggggcgaggactg
attgacatggtgaaaaaccaggctatggctgatgctctagagagatttggagaaaatcgt
tttgtgtctcctatgtcatgggacctggtaggaagaaacctctttgccatggcagtagag
ggcgctgtcttcttccttatcacagtgctcatccagtacagattcttcatcaaacccagg
cccgtgtatgccaagctgcctcccgtgaatgatgaagatgaggacgtaacaagagagaga
cagaggataattagcggaggaggacaaagtgacatactggaaatcaaggagctaaccaag
atttacagaatgaagagaaagccagcagtggataggatctgtgttggaattccccctgga
gagtgctttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatgcta
actggtgatacagatgtgacaggaggagaagctttcctcaaaggaaacagcattttgtcc
aacatccaagaagtccatcagaacatgggctattgcccacagtttgatgctgttaatgat
ctgctgacaggacgagagcatttagagttcttcgcactcctgagaggtgttccagagaaa
gaagtctgcaaggttggcgaatgggcaattcgcaaactgggtctcgtgaaatacggagaa
aaatatgctgggaattacagtggtgggaacaggcgcaagctctccacagccattgccctc
attggagggccacctgtggtgttcctggatgagccaacaacggggatggatcccaaagcg
cgtcgtttcttgtggaactgtgctctgagtgtaataaaagaggggagatcagtggtgctc
acgtctcacagcatggaagaatgcgaagccctgtgcactcgaatggcgataatggtcaac
gggcggttcaggtgtctgggcagcgtccagcatctaaagaacagatttggagatggttac
accatagtggtgagaattgcaggggcaaacccagatctgaagcctgttgaggagttcttt
gggcatgctttccctggaagtgtcctgaaggaaaagcatcggaatatgctgcagtaccag
cttccttcttcgccatcctccctagccagaatattcagtattctctcccagaacaaaaag
agactccacatagaagactactccgtttctcagaccacacttgaccaagtttttgtaaat
tttgctaaggaccaaagtgacgatgaccaccctaaggacctgtcattgcacaaaaaccag
actgtggtagacattgcgatacttaattctttcctgcaagatgagaaggtaaaagaaagt
tgtgtgtga
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integrated database retrieval system
