Pogoniulus pusillus (red-fronted tinkerbird): 135173991
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Entry
135173991 CDS
T10504
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03015
mRNA surveillance pathway
ppus04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135173991 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135173991 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppus03021
]
135173991 (SYMPK)
03019 Messenger RNA biogenesis [BR:
ppus03019
]
135173991 (SYMPK)
Transcription machinery [BR:
ppus03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135173991 (SYMPK)
Messenger RNA biogenesis [BR:
ppus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
135173991 (SYMPK)
U7-dependent histone pre-mRNA processing factors
135173991 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
Motif
Other DBs
NCBI-GeneID:
135173991
NCBI-ProteinID:
XP_063997290
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
LAGAGGRKKVFRLGDVLKPLSDIQLEKLKLAAVRRILRAERAVACSGAAQARVKILASLV
TQFEMPLKGEVLAFILEDVRGRLELAFAWLYQEYSAHLGRGGTAGTPERYDQCLIGLLAG
LQEKPDQKDGIFTRVVLEAPLLTESALEVIRKYCEDESRTYLGMATLRDLIFKRPCRQFQ
YLHVLLDLSSHEKDKVRCQALLFIKRLYEKEQLRDYVEKFALNYLQLLVHPNPPSVLFGA
DKDTEVAAPWTEETIKQCLYLYLALLPLNHKLIHELASVYTEAIADIKRTVLRVIEQPIR
GMGMNSPELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLI
PVLNGLEKKEVVQALPKLIKLNPIVVKEVFNRLLGTQHGDGSSALSPLSPGELLVALHNI
DSSKCDMKSIIKATNLCLAERRLYSSEVLAVVLQQLAEQCPLPTLLMRTVIQALAMYPRL
GTFVMNILARLIMKQVWKYPKVWEGFIKCCQRTRPQSHPVLLQLPPPQLGAICHKCPELR
EPLLAHVRALPPHQQAHIPLATMAILEASARHEPDAQEVPPGEEKPSKRPNEEEGKGKTM
PAGGAQAVPGGVPPTEGVPPEADLDPPPIFISGPEDEESSGGTESPPDTALNAPKDPTGG
TDPSPPTEAPPSSSSPSSEPPPPGTQSPEVPPGAAGTDATPGPAEL
NT seq
2122 nt
NT seq
+upstream
nt +downstream
nt
gctggcaggagcgggtggcaggaagaaggttttccgcctgggggacgtcctcaagcccct
gagtgacatccaactggagaagctgaagctggcagcagtgcgccgcatcctgcgggcaga
gcgcgccgtggcctgcagcggcgctgcccaggctcgagtcaagatcttggcctccctggt
gacccagttcgagatgcccctcaagggggaggtcctggcattcatcctggaggacgtccg
tgggcgcctggagctggcatttgcttggctctaccaggagtacagtgcccacctggggcg
agggggcacagctggcacccctgagcgctacgaccagtgcctgatcgggctcctggcagg
gctgcaggagaagcctgaccagaaggatggcatcttcaccagggtggtgcttgaggctcc
tctgctcaccgagagtgctctggaggtcatccgcaagtactgcgaggatgagagcaggac
ctacctgggcatggccaccctgagggacctcatcttcaagaggccttgcaggcagttcca
gtacctgcatgtcctgctggacctcagctcccacgagaaggacaaggtgcggtgccaggc
tctgctcttcatcaagaggctctacgagaaggagcagctcagagactacgtcgagaagtt
tgccctcaactacctccagctcctggtccaccccaaccccccctcagtgctcttcggggc
tgacaaggacacagaggtggcagctccctggacagaggagaccatcaagcagtgcctcta
cctctacctggcactgctgcccctcaaccacaaactcatccacgagttggcatcagtcta
caccgaggccatcgccgacatcaagcgcacagtgctcagggtcatcgagcagccgatccg
tggcatgggcatgaactctcctgagctgctgctgctggtggagaactgccccaagggggc
agagactttggtgactcgatgcctgcacagcctgaccgacaaagtgccaccctcgccaga
gctggtgaagagggtcagggacctgtaccacaagaggctgccagatgtgaggttcctcat
ccctgtcctcaacggcctggagaagaaggaggtggtgcaggccctgcccaagctgatcaa
gctcaaccccatcgtggtcaaggaggtcttcaaccgcctgctgggcacacagcatggcga
tggctcctcggcactgtcccccctgagcccgggggagctcctggttgccctccacaacat
cgactcctccaagtgtgacatgaagtcaatcatcaaagccaccaacctgtgcctggcaga
gcgcaggctgtacagctcggaggtgctggcagtggtgctgcagcagctggcagagcagtg
cccactgcccaccctgctcatgcgcactgtgatccaggccctggccatgtacccacgcct
gggcaccttcgtcatgaacatcctggcacggctcatcatgaagcaggtgtggaagtaccc
caaggtgtgggagggcttcatcaagtgctgccaacgtaccaggccccagtcccaccctgt
gctgctgcagctgccacccccccagctcggtgccatctgccacaagtgccctgagctcag
ggagcctctgctggcacacgtgcgggcactgccaccccaccagcaagcccacatccctct
cgccaccatggccatcctggaggcctctgcccgccacgaacctgatgcccaggaggtgcc
ccctggcgaggagaagccttccaagaggccaaacgaagaggagggcaaaggcaaaacgat
gcccgcgggaggtgcccaggcggtgcccgggggggtgccccctaccgagggggtaccccc
cgaggctgacctcgaccctcccccgatcttcatcagcggccctgaggatgaggagagctc
agggggcaccgagtccccccctgacaccgctctcaatgcccccaaggaccccaccggtgg
caccgacccctccccccccaccgaggctcctcccagcagctcctccccctcctcggaacc
acctccccctggcacccagagccctgaggtgcccccgggggcagctggcaccgatgccac
ccccgggccggcagagctctga
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