Pogoniulus pusillus (red-fronted tinkerbird): 135174486
Help
Entry
135174486 CDS
T10504
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 5-like
KO
K20684
Rho guanine nucleotide exchange factor 5
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppus04131
]
135174486
Membrane trafficking [BR:
ppus04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
135174486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
SH3_1
SH3_9
PH
SOS1_NGEF_PH
wnt
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
135174486
NCBI-ProteinID:
XP_063997809
LinkDB
All DBs
Position
4:916135..941103
Genome browser
AA seq
1705 aa
AA seq
DB search
MSLMEAEETSEGGTTPPAASSTTGGAWDSTPARGEHHHGPHTSAKVSMSPSDSAKGAELS
TPECCLSAPGKAAEMLGRASNPVPKVPAGLQQEQGDAEPQEELSELEGEMFSEQGVLDCS
LKLTQVELAELESNQDSSLRTDQGGQATGNSTLQAVDLITELPQCQAEVTADGSVPEAQH
LNSPLVAAFPSPRETPKCFLVCKTVSEGHYKAEPCLGKSSGGDVLLEVDAGAEQKASKQT
AAEEQPTSEQAGEDTPEGAGESLRALQGSEGDSASPPASRLSPTFAGGSQTSTLQAEGKI
SAGETRNSSMVKAQGAGRVPKGNSSTARSLLLEDSDRRAEGSPACPAESALQGRAVANRA
EGVNMSQHEDPAQDEAASELQQDEEKKEPKEQNLPEEGKALGSKVGKSKGQSEQREQQRE
ELGLKEELQLEPPSASFKPEVPSVPRHAVGPCGLENVLVAEQTGAVFPPGEPVAVRPAPA
GVLPQAAAAEAGSGCQPPAGSPLSSDNLNPGGETSHRCQASEQAEDPEDSGLLFQWWSGE
RRKLNWADWPRLGKEGGHSDGHGKPLLQFGRDALLPGAEKQEVSVPAHPSSVSQSLGPAH
PGSEELGEAELQEFIPALPSELSSVASASGPWQPPASGAASVTPEDCPVASEKAANQAAA
VQVQEPRSGEAAAPRGAAPEEASTSHQLLTCEEGFHEGLPGPSVACTSCLALEESRIGAV
TAGPLEPPRTPGRTSTPLSPLETTQHSLPGSSAAVQGEGERSRHGSGSNNRCSQVQFXPP
GEPGSRISSVLSSLTWPSEDDSVPAVSFQEQPLSHSSLPPVSEPDANLLLPPAPQLQSPG
KLRPPALHADHLAQPPALQGHQPLAPVPCCRPHASCEVGDSELAGPLPAPRTAAPGPEPH
TVASAAGGEEGAEKGDLAPVTGEWDLGESGTQETETCDDSGVSLLARSVSAVGSEALAGC
SDSSPDTADQHRPSGSSSPEHPPWPSLEGLLASTDCGSREAAQPLPMLAFTNPIHFLQLG
PPSPPTGRKSCQEEEVSGQPRWQHQAGTFGMGTKSIQAPLAVAENTGDERRVKQKLGGGG
EGGLAAQPQEGDAKAPPLRKASSWPDKRASRAAAQEPAAHQDSPMKRRVKSKDWHRQGLK
RTSVPPDILQEMPSVPSEEEAHKAHREPPGSAETVILREKKPADTTENFKRRHSKLINSS
RLLYQEYSDVVLNKAIQSQKRVDSFAEDLESSFPSSPRLRRKVLSPQDSYLQRLSVCSTA
SLWQDIPVIRGSRMLLNMSRDEQKLQEAKFELIMSEASYLRSLNVAVDHFQRSAELQAML
TNQERQWLFSRLHDVRDVSASFLFDLEEKFEEDMFTFHVCDVALKHAPEFRRVYLPYVTN
QTYQEQTFQRLLNGNAGFQQVLERLESDPVCQRLSLKSFLILPFQRITRLKLLLQNILKR
TMPGSEEEVQATQAYDALEKLIKDCNENVQRMKSTEELIYLSQKIEFECKIFPLISQSRR
LVKCGELSALDNSPLSPKWKVTTRPIYLHLFNDCLLLSRPKEGGRFVVFDHAAFSDVRGE
KCEMKLHGSNKNVFRLFLLQNYQGKRVEFLFRTETHSEKLRWISALAPPRGELDLLECPD
APQVQCIKTYKARENDELALEKADIIMVMQYSNDGWMEGVKLSDRERGWFPSEHVELISS
KQARQKNLKEEQRVKNAKQHVFCKK
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgatggaggctgaagaaaccagtgagggaggtaccactcccccagcagccagc
agcaccactgggggagcctgggattctaccccagccagaggggagcatcaccatggccct
cacacctcagccaaagtgagcatgagcccctctgactctgcaaagggagcagagctcagc
actcctgagtgctgcctctctgccccaggcaaagcagcagagatgctgggcagagcctct
aaccctgtgccaaaagtgccagcaggcctgcagcaagagcaaggggatgcagagcctcag
gaggaactctctgaattggaaggagaaatgttttcagagcagggtgttctggattgttct
ctgaaactcacgcaggtggagctggctgagctagaaagcaaccaggactcttctctcagg
acagaccagggtgggcaagccactggcaacagcaccctgcaggctgtggacctcatcact
gagcttcctcagtgccaggctgaagtgactgctgatggctcagtccccgaggcccagcac
ctgaattcacctttggttgctgcctttccctctccgagggagacacctaagtgcttcctg
gtgtgtaaaactgtttcagaagggcattataaagctgagccctgcctgggtaagagctct
gggggggatgttctgctggaggtcgatgctggtgcagagcagaaagcgagcaagcagaca
gcggcagaggagcagcctacctcagagcaagcaggggaggacactcccgaaggtgctggg
gaaagcctgagggcacttcagggttcggaaggggactcagcgtcgcctcctgcctctcgg
ttgtctcccaccttcgcaggcggcagccagacaagtacactacaggcagaaggaaagatc
tcagctggggaaacaagaaacagcagcatggtcaaagcccagggagcaggaagggttcct
aaaggtaactcctccaccgccagaagcctcctgctggaagacagtgacaggagagcagaa
ggcagccctgcctgtccagcagagagtgccctccaaggaagggctgtggccaacagagct
gagggagtgaatatgtcacagcatgaggacccagcacaggatgaggcagcatctgaactt
cagcaggacgaggagaagaaagagcccaaagagcagaacctgccagaagaaggaaaagct
ttgggctccaaagtgggaaaaagcaagggacaaagtgagcagcgagaacagcagagggaa
gagctcgggctgaaggaagagcttcagctagagcctccatcagcatctttcaagccagag
gtaccttctgttcccaggcatgctgtgggcccttgtggtctggagaatgtcttggtggca
gagcaaacaggagcagtgtttcctcccggggaacctgtggctgtgcgtccggctcctgcc
ggtgtgctgccacaagctgctgctgcagaagcaggctctgggtgccagccacctgctggc
agccctctgtcctcagataacctgaacccaggaggtgaaacttcacacaggtgccaagcc
tctgagcaggcagaagacccagaagactctggcttgctgttccagtggtggtcaggggag
cggagaaagctgaactgggctgactggccaaggctgggcaaggagggtgggcacagtgat
gggcacggaaagcctctcctgcagtttggtagggatgcactgctccctggagcagagaag
caagaggtttctgttccagcacacccttcctctgtctcccagagcttggggccagcccat
cccgggtcagaagagttgggagaagctgagcttcaggaattcattccagctctcccctca
gagctcagctctgtggcgtcggcgtctggcccatggcaaccccctgctagtggggcagcc
tctgtgacccccgaggactgtcctgtggcctcagagaaggcagccaaccaagcagctgct
gtgcaagtgcaggagccaaggtcaggagaagctgctgctccgaggggtgcagctccagag
gaggccagcacttcccatcaactcctcacttgtgaggaaggctttcatgaaggccttcct
ggcccctctgtagcatgcacaagctgtcttgccctggaggagagcaggattggagctgtc
actgcagggccactggagccaccccgaacaccaggcaggacttccactcccctgagcccc
ctagagacgactcagcacagcctcccagggtcgagtgctgctgtccagggcgaaggagag
cgcagcaggcatgggtcaggaagcaacaacagatgcagccaggttcagttttaaccccca
ggagagcctggatccaggatctccagcgtcctgagcagcctcacttggccctctgaagac
gattccgtccctgctgtgagctttcaagaacaacctctgtcccactcgagcctacctcca
gtgtccgagcccgatgccaacctgctgcttcctcctgctccccagctgcaaagcccaggc
aagctcaggccccctgcactccatgcagatcacctcgctcagcccccagccctccagggt
caccagcccctggctcctgtgccctgctgcaggccacatgccagctgtgaggtgggtgac
agtgagctggctggccctttgcctgctcctcggactgctgcccctgggcccgagcctcac
actgtggcctctgctgctggtggagaagagggagcagagaaaggtgaccttgctccagtg
actggagagtgggatctgggtgagtcaggtacccaggagacagagacttgtgatgactca
ggggtcagtttgctggccagaagcgtttctgctgttggcagtgaagcattggctggctgc
tctgacagcagccctgacacggcagaccagcacaggccgtcgggcagctcctcacctgag
caccctccctggccctcgctggaaggcctgctagcatccacggactgcgggagcagagag
gctgctcagccccttcccatgctggccttcaccaatccaatccacttcctccagctcggc
cctccatcaccacccaccggcagaaagagctgccaagaggaggaggtctcagggcagcca
cggtggcagcaccaggcaggcacctttggcatgggcacaaagagcatccaagctccactg
gcagtggcggagaacacaggagatgagagaagggtcaagcaaaagctgggaggaggagga
gaaggtggcttggcagctcagccccaggaaggggatgccaaggcaccacctttgaggaaa
gcatcgagctggccagataagagagccagcagggcagctgcacaggagccagcagctcat
caggacagcccaatgaagcgccgagtgaaaagcaaggactggcaccggcagggcttgaag
aggacctcagtaccgccagacatcctgcaggaaatgccttctgtgccctcagaggaagaa
gctcacaaggcacacagggagccaccaggcagtgcagaaacagtgatattgagagagaag
aaacctgcagacacgacggagaacttcaaacgcagacactccaaactgatcaactcgtca
agactgctgtaccaggagtacagtgatgtggtgctgaacaaggccattcaaagccagaag
agagtggactcttttgcagaggacctagagtcgagcttcccaagctccccgaggctgcgc
aggaaagtgctgtccccccaggactcctacttgcagcgcctgtcagtctgctctactgca
tccctctggcaggacatccctgtgataaggggcagcaggatgctgctcaatatgtcccgt
gatgagcagaagctgcaggaggccaaatttgagttgatcatgtctgaagcttcctaccta
cgcagcctcaacgtggcagtagatcacttccagaggtcagcagagctgcaggcaatgctg
accaaccaggagcggcagtggctcttctcccgcctccacgacgtccgcgatgtcagcgcc
agtttcctctttgacttggaggagaagtttgaggaggacatgttcaccttccacgtgtgt
gatgtggctctgaaacatgcccccgagttccgcagggtctatctgccctacgtaaccaac
cagacctaccaggagcaaaccttccagcgcctactaaatggaaatgcagggttccagcaa
gtcctggagagactggaaagcgatccagtgtgccagcgtctctcacttaaatccttcctc
atcctccctttccagcgcatcactcgcctcaaactcctcttgcagaacatcctgaagaga
accatgcctggctctgaggaggaagtgcaggcaacacaggcctatgatgcacttgaaaag
ctcatcaaggattgcaatgaaaatgtccagcgcatgaagagcactgaagagctgatctac
ctcagccagaagattgaatttgagtgcaagatctttcccctcatctcgcagtcgcgccgc
ctggtgaagtgcggggagctgtctgcgctggacaacagccccctgagtccgaagtggaag
gtcaccacccggcccatctacctgcacctcttcaacgactgcctgctgctgtcgcggccc
aaggagggcggacggtttgttgtgtttgaccacgctgctttctcagacgtgcgtggggag
aagtgtgagatgaagctgcatggaagcaacaaaaacgttttccgtctctttctgctccag
aattaccagggaaagagagtggagttcttgttccgtacagagacacacagtgagaaactg
agatggatctctgctttggctcctccacgaggagaactggacctcctggaatgtcctgat
gcaccacaagttcagtgcataaagacctacaaggctcgagagaacgatgagctggctctg
gagaaagcagacatcatcatggtgatgcagtacagcaatgatgggtggatggaaggagtc
aaactttctgaccgggagagaggctggttcccctcagagcacgtggagctgatatccagc
aaacaggcgaggcagaagaacctgaaggaggagcaacgtgtgaagaacgccaagcagcat
gtcttctgcaagaaataa
DBGET
integrated database retrieval system
