Pogoniulus pusillus (red-fronted tinkerbird): 135174865
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Entry
135174865 CDS
T10504
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04510
Focal adhesion
ppus04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135174865 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135174865 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
OVT1
Motif
Other DBs
NCBI-GeneID:
135174865
NCBI-ProteinID:
XP_063998553
LinkDB
All DBs
Position
4:31839951..31887828
Genome browser
AA seq
1785 aa
AA seq
DB search
MGRLPLCLCYCLALWSAAAQEPEYSYGCAEGSCYPATGDLLIGRAARLSASSTCGLRQPE
PYCIVSHLQEDKKCFICDSKDPFHDTLNPDSHLIENVVTTFDPNRLKLWWQSENGLENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGETWQVYRYFAYDCESSFPGISTGPM
KKVDDIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRVKFIKLHT
LGDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVDGFPEEVEGMVHGHCMCRH
NTKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNGHSSQCHFDMAVYMTTGNTSGGVC
DDCQHNTIGRNCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGGICDRYTDFSTGLI
AGQCRCKLFVEGERCDLCKEGFYGLSADDPAGCQSCACNPLGTHPGGNPCDSETGNCYCK
RLVTGRQCSQCLPEHWGLSNDMDGCRPCDCDQGGALNNNCSSESGQCTCRPHMFGRQCNQ
VEPGYYFISLDHYIYEAEEASLGPGVNIIERQYTPDRTPSWTGIGFVRVPEGAYLEFYID
NIPYSMEYDILVRYEPQLPDQWEKAVISVSRPGKIPTGSRCGNTVPDDDNQVVSLSPGSR
YVVLPRPVCFEKGLNYTIRLELPQYSSVDTEMESPYTLIDSLVLMPYCKSLDIFTVGGSG
EDVVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHETALSCQCDPQGSLS
SVCDPSGGQCQCRPNVVGRQCDRCAPGTFGFGPSGCRPCECHVQGSYNTFCDAETGQCHC
FPGVYGRQCDHCLPNFWGFPNCQPCHCNGHADDCNPYTGECLSCRDHTAGHNCERCQAGY
YGDPVLGSGDHCRPCPCPDGPESGRQFASGCYQDPITLQVVCVCSTGYIGSRCDECASGF
FGSPDEVGGACQPCQCNNNIDTTDPEACNKRTGTCVKCLYHTEGENCQFCQQGYYGSALQ
QDCRKCVCNVLGTVQEDCEGPESCQCEAATGQCQCLPNVVGQTCDRCAPNTWRLASGTGC
EQCDCDPARSLGPACNEFTGQCHCMPGFGGRTCRECQELFWGDPAVECQACDCNPRGIQT
PQCDRATGQCICNEGVEGPRCDKCSRGYSGVFPDCVPCHQCFALWDVIISELANRTQQFL
DRANALKITGVTGPYQKTLNALEEKLSEIKTIITQNPAAEPLKNIGNLFEEAEKLTADVT
VKIADIEENLSALAAKSNSTDTDLSALETDAKSLDHVVKELAEQLEFIKISDVRGALDSI
TKYFQMSLEAEERINASTVHPNSTVELSAQTRQEVEDLINEKEAQFKAKQEEQSRLLDEL
AGKLQSLDLSEVAEKTCGTPVGASCAESKCGGLNCRTDDGKKKCGGPGCDGLVTVAHNAW
QKAMDFDRDILGALAEVEQLSKMVSEAKQRADEAKQNAQAVLLKTNATKEQVDRSNEDLR
NLIKQIRDFLMQDSADLDSIEAVSNEVLNMEMPTTPQQLQALTEDIRDRVESLSDVEVIL
QQSAGDIARAEMLLEEAKKASKGATDVKVTADMVKVALEEAEKAQNAAEKAIKQADEDIK
GTQDLLTSIESENAASEETLNNATLRLFELQRSVEDIEQKAATNSENVYSIEEKLVTANQ
NAEEVKKVLNTELNDKYKTVEDLIAKKTEESAEARRKAGVLQDEAKALLAQANSKLQLLK
DLENTYENNQKVLEDKAKQLVELEETVRSLLQTISQKAAVYSTCL
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcctccccctgtgcctctgctactgcttagcgctatggtccgcggccgcgcag
gagcccgagtatagttacggctgcgccgaggggagctgctaccccgctactggcgacctg
cttatcggccgtgccgcccgcctttccgcctcctccacctgcggcctccgccagcccgag
ccatactgcatcgtcagtcacctccaggaggacaaaaaatgtttcatatgtgactccaag
gatcccttccacgatactcttaatcctgacagtcatctcattgaaaatgttgtcaccaca
tttgatccaaatcgcctgaagctctggtggcagtcagaaaatggtttggaaaatgtcacc
atccagttggacctggaggctgagtttcacttcactcatctcattatgaccttcaagaca
ttccgtccagctgcaatgttgatagaaagatcatctgattttggagaaacgtggcaagta
tataggtattttgcttatgactgcgagagctcatttcctgggatttcaactggacccatg
aagaaagtggatgatataatttgtgattcacggtactcggacattgaaccttcaacggaa
ggagaggtaatatatcgtgttttagatcctgcttttcgaattgaagatccatacagtcca
aggattcagaacctattaaagatcacaaatctgagagtcaagttcatcaagctgcacaca
ctgggagataatctcttggattctaggatggagatcagagagaagtactactatgccatc
tatgacatggtggttcgtgggaactgtttctgctatggacatgccagcgagtgtgcgcca
gtggatggctttcctgaagaagtggaagggatggtccatgggcactgtatgtgcagacat
aataccaaagggttaaactgtgaacagtgcttggatttctaccatgacttaccctggcga
cctgccgaaggccgcaacagtaatgcatgcaaaaagtgcaattgcaatggccattccagc
cagtgccacttcgacatggctgtgtacatgacgacaggcaacaccagtggaggagtctgt
gacgactgccagcacaacaccataggacgcaactgcgagcaatgcaagccattctacttc
cagcacccagagagagacctgcgcgaccctgacgtctgcgagccttgcaactgtgaccca
gccggctcccagaatggtggcatctgcgatcgctacactgatttctccactggcctgatt
gctggacaatgccgttgtaaactgtttgtggaaggggagcgttgtgacctctgtaaagaa
ggtttctatggcctgagtgccgatgacccagcgggttgtcagtcttgtgcctgtaaccct
ctgggtacccaccccggagggaatccctgcgattcagagacaggaaactgctattgtaaa
cgcttggtgacaggcagacagtgcagtcagtgcctgcctgagcactggggcttgagcaat
gacatggatggatgtcggccatgcgactgcgaccagggaggagcactaaacaacaactgc
tcaagtgaatctggccaatgcacatgccggccccacatgtttggacgtcagtgcaaccag
gtggagcctggctattacttcatttcacttgatcattacatctatgaggcggaggaagcc
agcttgggtcccggagtaaacatcatagagcgccagtacacgccagaccgcaccccctca
tggacaggcataggatttgtaagggtccctgagggggcatacctggaattctatattgac
aacatcccctactccatggaatacgatattctggtccgctatgagccacagttgccagac
cagtgggaaaaagctgtgatcagcgtctcgcgtccaggcaagattcccacgggtagccgg
tgtggcaatacagttcctgatgatgataatcaggttgtctcgctgtcacctggctccagg
tatgttgttcttcctcggcctgtctgctttgagaaggggctgaattacaccatccgcctg
gagctgccccagtactcctctgtggatacggagatggagagcccctacacgctcattgac
tctcttgttctcatgccctactgcaaatcgctggacatattcacagtgggaggctcaggt
gaagacgtggtcacgaacagtgcttgggaaactttccaacgataccggtgtctggaaaac
agcaggagtgttgtgaaaacccccatgactgatgtctgcaggaacatcatattcagcatt
tctgcactactacatgagactgcattatcgtgccagtgtgaccctcagggctccctgagt
tcagtgtgtgaccccagcggaggacagtgccagtgtcgtcccaatgttgtcggaagacag
tgcgacagatgcgcccctggcacctttgggtttgggccaagcggatgccgaccgtgcgag
tgccacgttcaaggctcttacaataccttctgtgatgcagaaacaggccagtgccactgc
ttccctggggtgtatgggcgacagtgcgaccactgcttgcccaacttctggggcttcccc
aactgccagccctgccactgcaatggccatgctgatgattgcaacccctacactggggag
tgcctgagctgccgggaccacacagcagggcacaactgtgagaggtgccaggctggctac
tacggagaccctgtgctgggatcaggcgaccactgccgcccctgcccttgccctgatggc
cctgagagtggacgccagtttgccagtggctgttaccaggacccaatcacactgcaagtc
gtgtgtgtctgtagcacaggatacataggcagtcgatgtgatgaatgtgcgtctggcttc
tttgggagccctgatgaggttggtggcgcctgccagccatgccagtgcaacaacaacatc
gacaccactgacccggaggcctgcaacaagaggacaggaacgtgcgtgaagtgtctctat
cacaccgagggcgaaaactgccaattctgccaacagggctactatgggagtgccctgcag
caagactgcagaaagtgtgtctgcaatgttctgggcactgttcaagaggactgtgagggt
ccagagagctgccagtgtgaagcagccacagggcagtgccagtgcctccccaacgtggta
gggcaaacctgcgaccgctgtgcccccaacacatggaggcttgccagtggcaccggctgt
gagcaatgcgactgtgaccctgcacgttcccttgggcctgcttgcaacgagttcacaggg
cagtgccactgcatgccaggcttcggaggccggacctgccgggagtgccaggagctattc
tggggtgacccagctgtggagtgccaagcatgcgattgcaaccctcgtggcatccagacc
ccacagtgtgaccgtgccactgggcaatgcatctgcaatgaaggggttgaagggccacgc
tgtgacaagtgctcaaggggctactcgggcgtcttccctgactgtgtgccatgccaccaa
tgctttgccctctgggacgtgatcatcagtgagctggctaatagaactcagcagtttctt
gatagggctaatgccctcaaaatcactggagtcaccggtccataccagaagacactcaac
gccctagaggagaagcttagcgaaattaaaaccatcatcactcaaaatccagctgccgag
cccctgaagaacattggcaatctcttcgaggaagcagaaaaactgacagccgatgttaca
gttaagatagctgacatagaagaaaatctgtcagccttagcagcaaagagcaatagcaca
gacactgacctgagtgcactggagacagatgccaaaagcctagaccatgtcgtgaaagaa
cttgcagaacagctagagttcatcaagatctctgatgttcggggagccttggatagtatc
accaagtattttcagatgtccctggaggcagaggagaggatcaatgcctccactgttcac
cccaacagtaccgtggagctgtcagcacaaacacggcaggaagtggaagacttaatcaac
gagaaggaggcccagttcaaggctaaacaagaggagcagtctcgccttctggatgaactt
gcaggcaagctgcagagcttggatctctccgaagtggctgagaagacatgtggcactccc
gtgggagcctcttgtgctgagtccaagtgtggcggtttaaactgtcgaacagatgatgga
aagaagaagtgtggaggacctggctgtgatgggctggtgaccgtagcccacaatgcctgg
cagaaagccatggattttgacagagatatcctcggtgcactagcagaagttgagcagctt
tccaaaatggtttctgaggcaaaacagagagcggatgaagcaaaacaaaacgcacaagca
gttttgctcaaaaccaatgctacaaaggaacaagtggacagaagcaacgaagatctgcga
aatcttattaaacagattagagacttcctcatgcaagacagtgctgaccttgatagcatt
gaggcagtgtccaatgaagtgttgaacatggagatgccaaccactccccagcagctgcaa
gccctcacagaagatattcgtgaccgtgtagaaagcctttctgatgttgaggttattctg
cagcagagtgctggagacattgccagagcagaaatgctgctggaggaagccaaaaaagca
agcaaaggtgcaacagatgttaaagtcactgcagacatggtgaaagtagcactggaagaa
gctgaaaaagctcaaaatgcagctgaaaaagccatcaaacaagctgatgaagacataaaa
ggaactcaagacttgctgacctcgatcgaatcggaaaatgcagcatctgaagaaacgctg
aacaatgctaccttacgtctgtttgagcttcagaggagtgttgaagacattgagcagaag
gctgctacgaattcagagaatgtgtacagcatagaagaaaaacttgttactgcaaaccaa
aatgctgaagaagttaaaaaggttctcaatactgagctgaacgacaagtacaaaacagtg
gaagatctcattgccaagaagacagaagagtcggctgaggccaggaggaaagcaggtgtg
ttgcaagatgaagctaaagccttgttggctcaagcgaacagcaaactccagctcctcaaa
gacttggaaaacacatatgaaaacaatcaaaaagttttggaagacaaggccaagcagttg
gtggagctggaagagacagttcgctccctcttacagacaatcagtcagaaggctgctgtt
tatagcacttgcttataa
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integrated database retrieval system
