Pogoniulus pusillus (red-fronted tinkerbird): 135174895
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Entry
135174895 CDS
T10504
Symbol
FBXL13
Name
(RefSeq) LOW QUALITY PROTEIN: F-box and leucine-rich repeat protein 13
KO
K10279
dynein regulatory complex subunit 6
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppus04121
]
135174895 (FBXL13)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppus03037
]
135174895 (FBXL13)
Ubiquitin system [BR:
ppus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
135174895 (FBXL13)
Cilium and associated proteins [BR:
ppus03037
]
Motile cilia and associated proteins
Nexin-dynein regulatory complex
135174895 (FBXL13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_At5g56370
F-box
LRR_EndoS
LRR_At1g61320_AtMIF1
LRR_8
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
135174895
NCBI-ProteinID:
XP_063998627
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All DBs
Position
4:33199325..33273431
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AA seq
795 aa
AA seq
DB search
MASLRTASPELRAYFSRHNLLDVYEVLLCGVIVMRPEDPLTFLEEKLREIMEKGLDAVVW
YMCIDLSLHTELKRISETCLSTVFGLDGEQLVTEELCAKAWNFYSRNLMKLCFGGWIRYN
VLRKNKRKKVKQQVAVAEVHYNIQILRLIVQKWSTWVQIHKEKVALTMKRVQHIFNQGYL
NAVMKAWHAEAHRSLETKAYFESLEKKSQIGCFETNDLTVRQKPSHLPEEALLQVFQFVN
LDDLARCAQVSQTWMLLTQNSSLWSDINFSSVRNKVQDQTAVSILHKWHPYILHLNLQGC
SSLHWPSFKSIGECKNLQDLNLSECQGLSDESMRLISEGCRALLYLNLSHTDITDRTLRL
LPSSFPNLQHLSLSHCRKFTEKGLLYLSSGKGCHKLRYLDLSGCIQISVDGFRNIAKGCS
GIQDLLLNKMPALTDRCIQALVEKCQQIMSIVFLDSPHLSDTTFKALAECKLVKVSIEGN
NQITDSSFELMSKSCLYIRHIHVADCQKITDAGLKMISPLKHILVLNVADCIRISDGGVR
PFVQGSSGAKLRELNLSNCIHVTDASITEIGQRCHKLTYLNLCHCENVTDAGIEALGSIS
ALLSIDLSGTNISDMGLRSLGQYGKIKDIAISECENISDTGIQEFCKGTKYLERCDISCC
PQLTDETLRSMAFHCHRLTAVSIAGCPKMTDSCIQYLAAGCHYLRFLDVSGCIHLTDKAL
KHLWKGCKRLQTLKMLYCRNITKQAVLKYTAKLERQEHNDADPPSWLGYDRDGNMSPSPK
HMWQSLNKQILQKER
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccctcaggactgcgagccccgagctccgagcttacttcagccgccacaacctc
ctcgacgtctatgaggtgctgctttgtggggtgattgtgatgcgtccagaagatccactc
acatttttagaagaaaagctcagagaaataatggagaaggggttggatgctgttgtatgg
tatatgtgtattgacctgtctttacacacagaattgaagaggatttcagaaacttgcttg
agcactgtttttggactagatggtgaacaactggtgactgaagaattatgtgccaaagca
tggaacttttacagcagaaacttaatgaagttgtgttttggaggatggatcagatacaat
gtgctgagaaagaacaaaaggaaaaaggtaaaacagcaggtggctgtagcagaggtccat
tataacatccaaatattaagactaattgtacagaagtggagcacatgggtgcagattcac
aaggaaaaagtggcattgacaatgaagagagtgcaacatatctttaatcaaggatattta
aatgctgttatgaaggcttggcatgcagaggcccacaggtctttggaaacaaaagcctac
tttgagagtttggaaaagaaaagtcagataggctgttttgaaacaaatgaccttactgtc
agacagaaaccatcccatttaccagaggaagccttattacaggttttccaatttgtaaat
ttagatgatctggcaagatgtgctcaagttagtcaaacgtggatgctgctgactcagaac
agttcattatggagtgatatcaatttctcatcggtgagaaataaagttcaggaccaaaca
gcagtaagtattttgcacaagtggcatccatatatcttacatctgaatcttcaaggctgc
tcgtctcttcactggcccagttttaaaagtattggtgaatgtaagaatttgcaagattta
aatctctctgaatgccaggggttaagtgatgaatcaatgagactcatatcagaaggctgc
agagctcttctctatttaaatctgtcacatacagacattactgaccgaacactacggctg
ttgccaagcagcttccccaatttacagcatctgagcctatctcactgcagaaaattcaca
gagaaaggtttactgtacctgagctctggaaaaggctgccacaagctccgctatttggac
ctttcaggttgcattcagatttcagttgacggcttcagaaatattgccaaaggctgcagt
gggattcaagatttgctactcaacaaaatgccagctcttacagacagatgtattcaggct
ctggttgaaaaatgtcaacagataatgtctattgtctttcttgactctccacatctttct
gatacaacattcaaagctcttgctgaatgtaaacttgtcaaggtcagcattgaagggaat
aaccaaattactgactcaagttttgaattgatgagtaaaagctgcctgtacatcaggcac
atacatgtggctgattgccagaagattacagatgctggtctgaagatgatttctccactg
aagcatattcttgtactaaatgtggcagactgcataagaatcagtgatggaggtgtaagg
ccatttgtacaaggatcttcaggagctaagctgagagagctgaatctgtctaattgtatt
catgtcactgatgcttctatcacagaaataggacaaagatgccataaactgacctaccta
aatttgtgtcactgtgaaaatgtgactgatgctgggattgaagctttgggaagtatttca
gcattgctatccattgatctctctggcaccaacatctcagatatgggcttgagatccctt
ggccaatatgggaaaataaaggatattgctatatcagagtgtgaaaacatcagtgatact
gggattcaggagttctgcaagggcacaaaatacctggaacgctgcgacatctcttgctgc
cctcagttgacagatgaaactctgagatcaatggcatttcactgccacagattgacagct
gttagcatagcaggttgcccaaagatgactgatagctgtatccagtatttggctgcaggc
tgccattatcttcgcttcttggatgtttcaggttgcattcatcttactgacaaagcactg
aaacatctttggaaaggttgtaagagactccagactctgaagatgctgtattgcagaaat
attaccaaacaagctgtcttgaaatacacagccaagcttgagagacaagaacataatgat
gctgatcctccttcctggcttgggtatgacagggatggtaatatgtccccttcaccaaaa
cacatgtggcagagcctgaataaacaaatccttcaaaaggaaagatga
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