Pogoniulus pusillus (red-fronted tinkerbird): 135174946
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Entry
135174946 CDS
T10504
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03013
Nucleocytoplasmic transport
ppus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135174946 (UPF2)
03015 mRNA surveillance pathway
135174946 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppus03019
]
135174946 (UPF2)
Messenger RNA biogenesis [BR:
ppus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
135174946 (UPF2)
mRNA cycle factors
P-body specific factors
135174946 (UPF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
135174946
NCBI-ProteinID:
XP_063998718
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All DBs
Position
4:40326867..40395017
Genome browser
AA seq
1293 aa
AA seq
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MPAERKKSANMEEKESPLNNKEKEFSERRPVSTSTREKPKEDVKIGMKRETLKIPEDKKK
KLEEDKRKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKLEEEEKKKQEEEKKKQEEAAAQ
LKEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKT
ITEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVSCAVHLCSLFHQRYADFAPSL
LQAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRE
SHTHVSVVISFCRHCGDDIAGLVPRKVKTVAEKFNLSFPPSEIISPEKQQPFQNLLKEYF
TSLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLL
DENMPDLPQEKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPA
ILFKDNEKCYQNKDSGKDESRDSKDAKDNKEAPGSEDLELELENLDINDDPLELDCGDEA
EDLTKKLLDEQGKREGADSIGAENSDGKHAERKQEDEEASTGSHLKLIVDAFLQQLPNCV
NRDLIDKAAMDFCMNMNTKANRRKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAED
LCSMLKGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHH
IEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPP
AEKTVKKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDVEVKDYVICCMINIWNV
KYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELY
NYRMVESAVIFRTLYSFTSFGVNPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSK
RKLDCFLVYFQRYVWWKKSLDVWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEEAIRQ
VQDLEREFLIKLGIVNDKESKDSITEGENMEEDEEEEEGGAETEEQSGNESEVNEPEEEE
GSDNEEEEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDK
MMLENLQQRSGESVKVHQLDVAIPLHLKSQLKKGPPLGGGEGESESGDTMPFVMLTRKGN
KQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRP
APANTNRERRPRYQHPKGAPNADLIFKTGGRRR
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgcaaaaagtcagcaaatatggaagaaaaagaatctccattaaataat
aaagaaaaagaattcagtgaaaggcgaccagtgagcactagcactagggagaagccaaaa
gaagatgtcaagattggcatgaagagagagactttaaagattcctgaagataaaaagaaa
aaattggaagaggataaaagaaaaaaggaagacaaggagcggaagaaaaaagaggaagat
aaagtaaaggcagaagaggagcaaaaaaagaaagaagaagaagaaaaaaagaaacttgaa
gaggaggagaaaaagaaacaagaggaagagaaaaagaaacaagaagaagcagctgctcag
ctcaaagaaaaagaggaagcacatcaactccatcaggaagcttgggaacgccatcaggca
agaaaagagcttcgcagcaaaaaccagaatgctccagacaatcgccctgaagagaacttc
ttcagcagactggattccagtctgaagaagaacacagcttttgtgaagaagctaaaaacc
atcactgagcaacaaagggactccttgtctcatgactttaatagcctgaatttaagcaaa
tacattgcagaagcagtagcttccattgtagaagccaaactgaaaatatcagatgtgagc
tgtgctgtgcatttgtgttccctatttcaccagcgctatgctgattttgctccttcgtta
cttcaggcttggaaaaaacactttgaagcaaggaaagaagagaaaactccaaacattacc
aagttaagaaccgatttgcgtttcattgcagaattgacaatagttggaattttcactgac
aaggaaggtctgtctttaatatatgagcagcttaaaaatattattaatgctgatcgagaa
tcccacactcatgtttctgtggttatcagcttttgtcggcactgtggagatgacattgct
ggtttggtaccaaggaaagtaaaaactgttgcagagaagtttaacttgagctttcctcct
agtgagataattagcccagagaaacaacaacccttccagaacttgttgaaggaatacttt
acgtctttgaccaaacacctgaaaagggaccacagggagctacaaaatattgaaagacaa
aacaggcgcattcttcactccaaaggagagctcagtgaagatcgacacaagcaatatgag
gaatttgcaatgtcttatcagaagctgttggcaaattctcagtctctagctgatcttttg
gatgaaaatatgcctgaccttcctcaagagaagccaacacctgaggaacatggacctggt
attgatattttcacaccaggaaagcctggagaatatgacctggagggaggtatctgggaa
gacgaagatgcaagaaacttctatgagaatctcattgacttaaaggcttttgtgccagca
attttgtttaaagacaatgaaaaatgttaccagaacaaggattctggcaaagatgaatca
agagattctaaagatgccaaagataataaggaagcacctgggagtgaggatttagaattg
gagctggagaacctggatattaatgatgaccctctggagttagactgtggagatgaggca
gaagatcttacaaaaaagcttctcgatgagcaagggaaaagagagggagcagatagcatc
ggagctgaaaatagtgacggaaaacatgctgaaagaaaacaagaggatgaagaagccagt
actggatctcatttgaaacttatagtggatgcttttcttcagcagcttcctaattgtgtc
aacagagacctcatagacaaggcagcaatggatttttgcatgaatatgaatacaaaagcc
aacagaaggaaactagtacgagcattatttatagttcctagacaaaggttagatttgctg
ccattttatgcaagactggttgccacattgcatccttgtatgtctgatgtagcagaggat
ctttgttccatgctgaaaggggatttcagatttcatgtaagaaaaaaggaccagatcaac
attgaaacaaagaataaaactgtgagatttattggtgagcttaccaagtttaagatgttc
tccaaaaatgacacactccactgtttaaagatgcttctgtcagacttttctcatcaccat
attgaaatggcatgtactctgctggaaacctgtggaagattcctctttagatcaccagaa
tctcacttgagaaccagtgtccttttggaacaaatgatgagaaaaaagcaagcaatgcat
cttgatgcacgatatgttacaatggtagaaaatgcctattactactgtaatccccctcca
gctgaaaaaactgtgaagaaaaaacgtcctcctttgcaggaatatattcgtaagcttctt
tacaaggatctctccaaggtgaccacagagaaggtcttgagacagatgcgcaagttgcct
tggcaggacgtggaagtaaaagattatgttatatgctgtatgatcaacatctggaatgtg
aaatacaatagtattcactgtgtagccaacctcttagcagggttggtcctttaccaggaa
gatgttggaattcatgttgtggatggagtgctagaggatattcgactgggaatggaggtt
aaccagccaaagtttaatcaacgtcggatcagcagtgccaagtttttgggagagctttac
aattaccgaatggtggaatcagctgtaatatttcgaactctgtattctttcacatcgttt
ggtgtgaaccctgatggcagtcctagtccactggaccctccagagcatcttttcagaatc
aggctagtttgtactatccttgatacctgtgggcagtactttgacagaggatccagcaaa
cggaagcttgattgcttccttgtgtattttcagaggtatgtttggtggaaaaaaagtctg
gatgtttggacaaaagatcacccatttcctatagacatagactatatgatcagtgataca
ctggaactgctgagaccaaagataaagctctgcaattctctggaagaagctatcagacag
gtgcaagatttggaacgagaattcttaataaaattaggaattgtgaatgataaagaatcc
aaagattccattacagaaggagagaatatggaagaggatgaagaagaggaggaaggtgga
gcagagacagaggaacaatctgggaatgaaagtgaagtaaatgagccagaagaagaggag
ggctctgacaatgaggaggaagaaggtgaagaagaggaggaggaaaacacagattacctt
acagactccaataaggaaaacgaaacagatgaggagaatacggaggtaatgattaaagga
ggaggacttaagcatgtgccttgtgcagaagatgaggactttattcaggcattggataaa
atgatgctggaaaatcttcagcaacggagtggtgaatctgtgaaagtacatcagttggat
gttgctattccattgcatctcaaaagtcagctgaaaaaggggcctccgcttggaggtggg
gagggagagtcagagtctggagacacaatgccatttgtcatgttaacacgtaaaggcaac
aaacagcagtttaagatcctaaatgtaccaatgtcttctcaacttgctgcaaaccactgg
aaccaacagcaagctgaacaggaggagagaatgaggatgaaaaagctcactttggatatc
aatgaacggcaagaacaagaggactaccaggaaatgttgcagtccctggcacagcgtcca
gctccagcaaatactaaccgtgaacgacggcctcgttaccagcatccgaagggagcacct
aatgcagatctaatctttaaaactggtgggaggagacgttga
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integrated database retrieval system
