Pogoniulus pusillus (red-fronted tinkerbird): 135174979
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Entry
135174979 CDS
T10504
Name
(RefSeq) collagen alpha-1(VII) chain-like
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
fn3
VWA_2
Kunitz_BPTI
Pur_ac_phosph_N
FN3_Tor_3rd
NDNF
Motif
Other DBs
NCBI-GeneID:
135174979
NCBI-ProteinID:
XP_063998819
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Position
4:46349338..46488798
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AA seq
2115 aa
AA seq
DB search
MLYAQILALAVAVVQYRAVAIHEACRMAEVADVLFLVGQSQGSGQERSQLLKEFLSSVVR
SFENAAVGAGGIRLALAVYEEKPRMSIDLTDYVTTEEMLVAIQDLSFKGSILKTGSALAF
AAHAMSRLDMLREDAAKVVVLITDGKSKDSVEDEAQVLQDKGVTVFAVGVKDADKNELNK
IASEPTAEHLLYVDDFHLLHKVASKLSRRLCFSASEPPRPSKQTLQAEKIIRPWDLYVSE
QSHSSLRVTWMPASGRVTGYHVHLHPLLPSGLPASEDQRQVVVDGNKSTVLVTDLKPNTK
YVFKVRAIYGDTLGESAAVKGKTTPLPPVTNFRVIEEGIFSLKVAWTPPLGKLEGYKIYI
PRANRPGTTYEQILPGEVSSHVLNDLQEDREYSISIYAVYPQGPSQPVAAVGRTLKLLPV
KSILLQNQTTDTLQARWSPVQGATGYRLTWTSAAGEGSIQDVNLSNTYSYYMIQGLQPGT
EYTVTINPVFGDVEGPVVSRKAATVASSTVQMLKVSEISINRALVSWDSVAGATGYRVAW
GPTPEFLGRDRPRQVALNKSATAYQLRSLAPDTDYVISLSVLFGWAQGPGVTASARTLPL
GYVPNFKVVSFTSTSLSLTWSPMAAATRFKVTWSPVRAGKGKQLAKTQYLGSRVLAYQIE
PLLPNTLYQVSIQAVFSKTEGPEVTLTHHTAGPHRELPATPVTSAELGMMRSPSISPSSV
QTTLLPPATTTALPPSPETSLLTTAASTLPSTTLPGPICGKLKADVGFLVDESSSIGQSN
FNKVKDFLFWVVSYFPKIGPEGTQVAVAQYSEDPRAAFYFNQYRDRSSALRAIKGLSYAG
GNTKTGHGITYMLQELFQSSRGMRPDFPHLLVLLTDRQPQDAVLPPARAAYALGIRVIVV
GVSGADPAELNSILLQQSLQNAFYVSTFDDFPQILQELIEAICSDLQPSDRQMPAKGTFM
GSTLHKGYDPQSFPTKGEKGEQGYPGPAGPKGDRGEPGYVLGGVEVIPGQTGQPGTPGQK
GQPGEPGVGGPPGLPGPQGPPGTSIKGEPGDSGIRGPRGRNGLKGDKGGMGEQGKPGLPG
PAGLDGIPGVPGARGEKGLPGPPGQKGDQVLGPPGEKGLRGDTGPTGALGPRGDKGMQGD
KGEKGSPGFGIPGQPGLKGDPGDRGNVGLSGKPGLKGDRGLKGEKGEPGPPGEPGKTGLR
GKDGEDGVPGAPGERGIRGPPGLPGRPGEQGIKGDTGQPGKDGDRGMDGMKGERGPPGPK
GEPGPPGKGVEMKDLERLFEANGIKLALLKDLCNALQDGLDGLMDQLGGSRTSMISKAKQ
EAQHATEHSDSLVSVTTHDGLASTRVAEAAQSLELEAQFRVTVPGELLKGSPSGGSGPEP
QTPGHPPEPVEESPEERKEERDSWRPNTSLSSALSVLPTHPEDDLQGNQSMELLESLEET
VEGQPQQDTVQENLNSDDGSALPMHVRARRSSEHEKHMVYLPGALGARKSLSGSTGGMGA
PGIRGDKGEKGQPGEIGEPGEKGTKGDRGGKGQKGEPGIGLRGPVGQAGSPGLKGEPGAP
GPPGAEGIQGIHGSAGTPGSQGDRGPPGVPGVPGQKGERGKRGRNGFAGPRGPSGAPGKE
GLPGTPGPKGNKGEIGVGTAGPRGPHGLPGPRGDEGIEGLRGPAGMVGPKGFPGVKGERG
DRGLLGPKGERGEPMTGFGPQGYKGSKGDPGEQGLPGFDGDKGEKGEDGPVGEKGAKGES
GSKGGMGLFGTRGPVGQKGDPGEPGWPGSAGAAGLNGRDGSKGAKGDRGLQGQKGKQGGK
GDPGTSGDTGQKGAKGFRGLPGLVGTSGAKGSKGETGSPGQPGIPGSDGPEGPKGEQGAS
GTDGAWGMPGEKGAKGAKGVPGLGGFKGQMGWPGKTGAAGPDGPPGPQGEPGPQGPRGKR
GRAQICLRGPPGMDGQKGELGENGPAGQKGEKGDPGLSEEEVKEVVRSEMRGSCGLEAAE
INRQLQGYFQPGEHTRRGGESQEEMLHNAHSMATLMTSVKPLMEPPPPIAAAPRAQPRMG
LPQHRRQEAYSQLPGPCLQPMDEGSCHHYTLLWYYHPKANTCRPFIFGGCQGNSNRFKTK
WKCEQRCKPSAVRRR
NT seq
6348 nt
NT seq
+upstream
nt +downstream
nt
atgctgtatgctcagatccttgccctggcagtagctgtggtgcagtacagagctgtggcc
attcatgaagcatgtaggatggcagaggtggctgatgttttattcctcgtgggacaatcc
cagggctcaggacaagagaggtctcagctgctgaaggagttcctcagcagcgtggttcgt
tcctttgagaacgcagcggtgggcgcaggaggcatccggctggccctggctgtctacgag
gagaaaccaaggatgagcattgacctcacagattatgtgaccactgaagaaatgttggtg
gcaattcaggatctctccttcaaaggcagcatcttaaagacagggtcagccctggcgttt
gcagcccatgccatgtctcgtctggacatgctgagagaggatgcagcaaaggtagttgtt
ttgatcacagatgggaaatccaaggactcagttgaagatgaagcccaggtcctgcaggat
aagggagtgacagtgtttgctgtaggagttaaggatgctgacaagaatgaactgaacaaa
atagcttcagagcccactgcagagcatctgctttacgtcgatgatttccacctgctccac
aaggtagcctccaagctctctcgaaggctctgcttctctgcctccgagccgccacggccc
agcaagcagactctgcaagctgagaagatcatcaggccctgggatttgtatgtcagtgag
caaagccacagctcactgagagtcacctggatgccagcctcagggagggtgacaggctac
catgtccacctccatcctttgctgccttcagggctgccagcttcagaggaccagcggcag
gtggtggtggatggtaacaaaagcaccgtgctggtgactgatctgaaacccaacaccaag
tatgtcttcaaagtgagggccatctatggagatacccttggggaatcagcagctgtcaag
gggaaaacaacacctctgcctccagtcactaatttccgtgtgatagaagaaggaattttt
agcttgaaggtggcttggacacctccactgggcaagctggagggctacaagatctacatc
cccagagccaacagaccaggaacgacctacgagcagattctgccaggtgaagtctcttcc
catgtgctgaatgacttgcaagaggacagagaatacagcatcagcatctatgcagtgtac
cctcaggggccaagccagcctgtggctgctgtggggagaacattgaagctcctgcctgtg
aaaagcatcctgctgcagaaccaaaccactgacacactccaggcaaggtggagccctgtc
cagggagcaacaggctacagactcacttggacatcagcagctggagagggaagcatccag
gatgtgaatctcagcaacacctacagctactacatgatccaggggctgcagcctggcact
gagtacactgtcaccatcaaccctgtctttggggatgtggaggggccagtggtgagcagg
aaagcagcaacagtggcatcaagcactgtccagatgctgaaagtgagtgagatatccatc
aacagagctctggtttcctgggactcagttgctggggccacgggctaccgagtggcttgg
ggtcctacaccagagttcctcggcagggaccgtcctcggcaggtggccctcaacaagtca
gccacagcctaccagctgcgcagcctggcccccgacaccgactatgtgatttccctctcc
gtgctcttcggctgggcgcagggaccgggggtcaccgcctcggcccggacgcttcccctt
ggctacgtccccaatttcaaggtggtgtccttcaccagcacaagcttgtctctgacatgg
agtcccatggcagctgccaccagattcaaagtcacctggagcccagtgagagcaggcaaa
ggcaagcagcttgccaagactcagtacctgggcagcagagtgttggcttaccagatcgag
cccttgctgcccaacaccctgtaccaagtcagcattcaggctgtcttcagcaagaccgag
gggcccgaggtgactctgactcaccacacagcaggacctcacagagagttaccagcaact
ccagtgacttctgcagaactgggcatgatgagatccccatccatatctcctagcagtgtg
caaaccactcttcttccaccagccaccaccacagcactaccaccaagcccagagacctca
ctattgaccactgcagcatctacgttgccatcgacaacccttcctgggccaatctgtggc
aagctcaaagcagatgttggcttcctggtggatgagtcctcaagtattggccagagcaat
ttcaacaaagtgaaggatttcctcttctgggttgtttcctactttccaaagattgggcct
gaagggacacaggttgctgttgctcagtacagtgaggatcccagggcagctttctacttc
aaccagtaccgtgaccgcagcagtgccctgagagccatcaaggggctgagctacgctgga
ggcaacacgaaaacaggtcatggcataacctacatgctgcaggagttattccagtcctcc
agagggatgagaccagatttccctcacctgctggtgcttctgaccgacaggcagccccag
gatgctgtgttgccaccagccagagcagcctatgctttagggatccgtgtcattgtcgtg
ggtgtctcaggagctgaccctgctgaactcaacagcatcttgctgcagcagagcctccag
aatgctttctacgtcagcacattcgatgacttccctcagatcctccaggagctgattgaa
gctatttgctctgaccttcagccttcagacagacagatgccagctaaggggaccttcatg
ggctcaacacttcacaagggctatgacccacagagcttccctacaaagggagagaaagga
gagcagggctacccaggaccagctgggccaaaaggagacagaggtgaaccaggctatgtc
ctgggaggagtggaagtgattcctggccaaactggtcagcctggcacccctgggcagaaa
gggcagccaggagaacctggagtaggaggaccaccaggtttaccagggccacagggacca
ccaggaacctccatcaagggtgagccaggggattcaggcatcaggggacctcgtgggagg
aatggcctcaagggtgacaaaggagggatgggagagcaggggaaacctggcttgccaggc
ccagcagggctagatggtattcctggagtgcctggagcaagaggagaaaagggactccca
ggacctccagggcagaagggagaccaagttttgggacctccaggagagaaaggtcttagg
ggagatactgggccaactggtgccctgggaccacgaggagacaaaggaatgcaaggggac
aaaggagagaagggaagcccagggtttggaattcctggccagcctgggctgaaaggagat
cctggagacaggggaaacgtaggtttgtctggaaaaccaggtctgaagggagacagaggt
ctgaagggagagaagggtgagccaggaccacctggggaaccaggcaagactggactaaga
ggtaaagatggggaagatggagtccctggagcaccaggggagagaggaatcaggggtccc
cctgggctcccaggccggcctggagagcaagggataaaaggcgatacaggacaaccagga
aaggatggagatcgtgggatggatggcatgaaaggtgaaagaggtcctccaggcccaaag
ggagaacctggtccaccaggcaaaggagtggaaatgaaggacctggagaggctttttgaa
gcaaatggtatcaagctggcactgctgaaggacctctgcaatgcactccaggatgggctg
gatgggctgatggatcagcttggtggctccaggactagcatgatctccaaagcaaagcaa
gaagctcagcatgccactgagcacagtgactccctggtgtctgtcaccactcacgatggc
ctggccagcactcgggtggcagaagcagcacagagcctggagctggaggctcagtttcga
gtgacagtgcctggagaactcctcaagggttcaccttctggtggctctggacctgagccc
cagaccccaggacaccctcctgagcctgtggaggaatcacctgaggaaagaaaggaggag
agagactcctggaggccaaacacttctctcagcagtgccttgtctgtgctcccaacacac
ccagaagatgatctgcaaggaaaccagtccatggagctcctcgagtccttggaggagaca
gtggaagggcagccacagcaggacactgttcaggaaaacctgaattcagatgatggctct
gcactcccaatgcatgttagagcaaggagatcatctgagcatgagaaacacatggtttat
ctccctggtgccctaggagcaaggaaatccctgtctggatccacaggaggaatgggagct
ccaggaattcgtggagacaaaggagaaaagggccagcctggggagataggagaacctgga
gagaagggcaccaaaggggacagaggtggaaagggtcaaaagggagaaccaggaattggg
ttaagaggtcctgtgggtcaagctggatcacctggacttaaaggtgagccaggggcccca
ggacctccaggagctgagggcatccaaggcattcatggcagtgctggcacccctgggtca
cagggggacagaggacctccaggtgtgcctggggtgccaggacagaagggggagcgtggc
aagagaggtaggaatggatttgctgggcccaggggaccatcaggagccccaggaaaagag
gggcttcctgggacacctggacccaaaggcaacaagggagaaattggtgttggaacagct
ggcccaagaggtcctcatggactgcctggtcctcggggtgatgagggcatcgagggactc
cggggccctgctggcatggtgggtccaaaaggcttcccaggtgtgaaaggagaaagaggt
gatcgaggacttctgggacccaagggagaaagaggcgagccaatgactggttttggaccc
cagggttataaaggcagtaaaggagatcctggtgaacagggcctgccaggttttgatgga
gacaaaggtgagaagggagaggatggacctgtaggagaaaagggagccaaaggtgaaagt
ggttccaagggagggatggggctctttggaacaagaggacctgtgggacagaagggggac
ccaggagaaccaggctggccaggctctgctggtgcagcaggtctcaatgggagagatgga
agcaagggagccaaaggtgacagaggtcttcaaggacagaaggggaagcagggaggaaaa
ggtgaccctgggaccagtggtgatactgggcagaaaggagcaaagggcttccgagggctt
ccagggctcgttggcacatctggagccaaagggagcaagggagaaactggcagtcctgga
caaccagggatcccaggatcagatggaccagagggaccgaagggcgagcagggagcctca
gggaccgacggtgcctgggggatgcctggggagaaaggagcaaagggggccaagggagtt
cctggcttgggaggcttcaaaggacaaatggggtggcctgggaagactggagctgctgga
ccagatggacctccagggccacaaggtgaaccagggccacagggtccacgaggcaaaaga
gggagagctcagatctgtctcagaggtcccccgggtatggatgggcaaaaaggagaactg
ggtgaaaatggtccagctggccagaaaggagaaaaaggagatcctggtctttctgaggaa
gaggtgaaggaggtggtcaggagtgaaatgagaggcagctgtggtctggaggcagcagaa
atcaacaggcagctgcaagggtattttcaacctggagaacacaccagaaggggtggtgaa
agccaggaagaaatgctccacaatgctcacagcatggccacgttgatgacttcggtgaag
cccctcatggagccacctccacctattgcagcagctccccgggcgcagccgaggatgggt
ctgcctcagcacaggaggcaagaagcctacagtcaattaccaggtccctgcctgcagccc
atggatgagggctcctgccaccactacaccctgctctggtactatcatccaaaggccaac
acctgcagacccttcatctttggggggtgccaagggaacagcaaccgcttcaaaaccaag
tggaagtgtgagcagaggtgcaagccctcagcagtcagaagaagatga
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integrated database retrieval system
