Pogoniulus pusillus (red-fronted tinkerbird): 135175228
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Entry
135175228 CDS
T10504
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135175228 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppus04121
]
135175228 (MID1)
Enzymes [BR:
ppus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135175228 (MID1)
Ubiquitin system [BR:
ppus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135175228 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
zf-C3HC4_3
zf-RING_2
zf-RING_5
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
135175228
NCBI-ProteinID:
XP_063999126
LinkDB
All DBs
Position
5:complement(4439538..4760580)
Genome browser
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR
YVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNSMSSCEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQETKLMEECDQLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFTREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFVVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGISYKSAPKHEWIGKNSASWVLCRCNNTWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSLAFYDALNSLHLYTFDITFGQPVCPTFTVWNKCLTIITGLPIPDHL
DSSEQLA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggaactgacctgccctatctgtctggagctgtttgaagacccg
ctgctgctgccttgcgctcacagcctctgcttcaattgcgcacaccgcatcctggtctcc
cactgcgccaccaacgagcccgtggagtctatcaccgccttccagtgcccaacctgccgc
tatgtcatcaccctcagccagcgcggtctagacgggctcaagcgcaacgtcaccctgcag
aacatcatcgacaggtttcagaaagcctcagtcagcgggcccaactcccccagcgaaacc
cgccgggagcgggcgttcgatagcaacagcatgtcgtcctgtgagaaggtcctctgccag
ttctgcgaccaggaccctgcccaggaggcagtgaaaacctgcgtcacctgcgaagtgtcc
tactgtgaggagtgcctgaaagccactcaccccaacaagaagccattcaccgggcaccgt
ctcatcgagcccataccagactctcacatcagaggattaatgtgcttggagcacgaggat
gagaaagttaacatgtactgtgtgactgatgaccagttaatctgtgccttgtgtaagctg
gttgggagacaccgtgaccatcaggtggcagctttaagtgagcgctacgacaagctaaag
caaaatttggaaagtaacctcaccaaccttattaagaggaatactgaactggaaactctc
ttggcaaaactcattcagacctgtcaacatgtagaagtaaatgcatcccgccaagaaacc
aagctgatggaagaatgtgaccagctcattgaaataatccagcaaagacgacaaataatt
ggaaccaaaatcaaggaaggaaaggtggtgaggttgagaaaactggctcagcagattgca
aactgcaaacagtgcatcgagcgctccacatccctcatctctcaggctgaacagtcgctg
aaggagaacgaccacgctcgcttcctgcagactgctaagaatatcactgaaagggtttcc
atggcaactgcatcctcccaggttctaattcctgaaattaatctcaacgatacttttgat
actttcgcactggattttaccagggagaagaaactgttggaatgtcttgattaccttaca
gctcccaacccacctaccattcgagaagaactatgtacagcttcttatgacactattact
gtccactggacatcggatgatgagttcagtgtggtgtcttatgagctgcagtacaccatc
ttcactggacaagctaatgttgttagtttatgcaactcagccgacagctggatgattgtt
cccaatatcaaacaaaaccactacacagtgcacgggttgcagagtggcactaagtacatc
ttcgttgttaaggcaattaatcaggcaggcagcagaagcagcgagcccggcaagctcaag
acaaacagtcagccatttaagctggaccccaaatctgctcatagaaaactgaaagtgtct
catgataatttgacagtggaacgtgatgaaacatcctccaagaagagtcacacgccagag
cggttcacgagtcaagggagctatggagtagctggcaacgtgttcattgacagcgggcgg
cattactgggaagtggttataagtggaagtacatggtatgctattggcatctcttacaag
tcagcaccaaagcatgagtggatcgggaagaactctgcctcctgggtgctttgccgctgc
aacaacacctgggtggttcggcacaacagcaaggaaatccccattgagcctgctcctcac
ctgcggcgggtcggcattctgctggactatgacaacggctcccttgctttctatgacgct
ttgaactccctgcacctttacaccttcgacatcacgtttggacagccggtgtgccccacg
ttcactgtgtggaacaagtgcttgaccattataactggcttgcctatccctgaccacctg
gactcctctgagcagctcgcatga
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