Pogoniulus pusillus (red-fronted tinkerbird): 135175481
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Entry
135175481 CDS
T10504
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04510
Focal adhesion
ppus04517
IgSF CAM signaling
ppus04518
Integrin signaling
ppus04519
Cadherin signaling
ppus04520
Adherens junction
ppus04530
Tight junction
ppus04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135175481 (ACTN1)
04518 Integrin signaling
135175481 (ACTN1)
04519 Cadherin signaling
135175481 (ACTN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135175481 (ACTN1)
04520 Adherens junction
135175481 (ACTN1)
04530 Tight junction
135175481 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
135175481 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppus04131
]
135175481 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppus04812
]
135175481 (ACTN1)
04147 Exosome [BR:
ppus04147
]
135175481 (ACTN1)
Membrane trafficking [BR:
ppus04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
135175481 (ACTN1)
Cytoskeleton proteins [BR:
ppus04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
135175481 (ACTN1)
Exosome [BR:
ppus04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135175481 (ACTN1)
Exosomal proteins of colorectal cancer cells
135175481 (ACTN1)
Exosomal proteins of bladder cancer cells
135175481 (ACTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
Uds1
FAZ1_C
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
135175481
NCBI-ProteinID:
XP_063999714
LinkDB
All DBs
Position
1:21699717..21822911
Genome browser
AA seq
958 aa
AA seq
DB search
MRGRRAGAGRCVPPPPWCARPRRRSGSGRQRRLLGLSGRGAGHRGQPPARRTDAGQGRAA
ATAAAAMDHYDPQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIEN
IEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEE
IVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWK
DGLGFCALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPD
EKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTI
PWLENRAPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFM
PSEGKMVSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKE
AMLQQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNA
RCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQD
TFIVHTIEEIQGLSTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTT
ITPHEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIG
RISIEMHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIR
VGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKAC
LISLGYDIGNDAQGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFK
ILAGDKNYITVDELRRELPPDQAEYCIARMAPYTGRDAVPGALDYMSFSTALYGESDL
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcaggcgggcaggggcggggcgctgcgtcccgcccccgccgtggtgcgcgcgg
ccgaggcggagaagtgggagcgggcgccagcgccgcctgctcgggctgagcggccgcggg
gccgggcacagagggcagccaccagcacgccggacggacgcaggacagggacgggcagcc
gccaccgcagcagcagccatggatcactacgacccgcagcagactaacgactacatgcag
ccggaggaggactgggaccgggacctgctcctcgacccggcctgggagaagcagcagaga
aagacatttacagcatggtgtaactctcaccttcgcaaggctgggacacagattgagaac
atagaggaagatttcagggatggtcttaagctcatgttacttctggaagtcatttcaggt
gaacgtttggctaaacctgaaagaggcaaaatgcgagtgcacaagatatccaacgtcaac
aaggccttggatttcattgccagcaaaggagtcaagctagtgtccattggagcagaagaa
atcgtggatggcaatgttaaaatgactcttggaatgatctggaccatcatccttcgtttt
gccattcaggatatctctgttgaagagacatctgctaaagaagggcttttgttatggtgt
cagaggaagacagccccttacaaaaatgtaaacatccagaacttccatataagctggaag
gatggcctcggtttctgcgctttaattcacagacaccgtccagagcttattgactacggg
aagctacgaaaggatgatcctctcactaatctgaacacagcttttgatgtggctgagaaa
tacctggatattcccaagatgctggatgcagaagacattgttggaactgcccgtcccgac
gagaaagccatcatgacctatgtttctagcttctaccacgccttctcaggagcccagaag
gcagagacagcagcaaatcgtatctgcaaggtgctggcagtcaaccaagaaaatgaacag
ctcatggaagactatgaaaaactggccagtgatctgctggagtggatccgccgcaccatc
ccctggctggagaaccgggccccagagaacaccatgcaagccatgcagcagaaactggag
gacttccgggactaccgccgcctgcacaagccccccaaggttcaggagaagtgccaactt
gagatcaacttcaacactttgcagaccaagctgcggctcagcaacaggccagccttcatg
ccttcagaagggaaaatggtttcggatataaacaatgcctggggtggcctagaacaggct
gagaagggctatgaggagtggttgttgaacgagattcgaaggctagagaggctggatcac
ctggcagagaagttccggcagaaggcgtccatccacgagtcctggacagatggtaaggaa
gcaatgctgcagcagaaggattacgaaaccgctaccctctcggagataaaggctctgctg
aagaaacacgaggcctttgagagcgacctggctgcacaccaggaccgcgtggagcagatc
gctgctattgcacaagagctgaatgagctggactactacgactctcccagcgtcaatgcc
aggtgccagaagatctgtgaccagtgggacaatctgggtgctctaacccagaaacgtaga
gaggccttggagaggacagagaagctactggaaacaattgaccagttgtacctggaatat
gccaagcgagctgcccctttcaataactggatggaaggggccatggaggacctgcaggat
acattcattgttcacaccattgaggagatccagggattgagcacagcccacgagcagttc
aaagccactttgccagacgctgacaaggagcgacaggccatcctgggaatccacaatgaa
gtctcaaagattgtccagacgtaccatgtcaacatggcaggaaccaatccttacactacc
atcaccccacacgagatcaatggcaaatgggaacatgtgcggcagctggtgcccaggagg
gatcaagccctgatggaggagcacgctcgccagcagcaaaacgagcggctgcggaaacag
tttggtgcacaggccaatgtcattggaccctggatccagaccaagatggaggagatcggg
cgcatttccatagagatgcacggcaccctggaggaccagctcaaccacctcaggcagtat
gagaagagcatcgtcaactacaaaccaaagatcgaccagctggaaggagaccaccagcag
atccaggaggctcttatctttgacaacaagcacaccaactacaccatggagcatatccga
gtgggctgggagcaattactaacaacaattgctagaaccatcaacgaagtggagaaccag
attctgacccgtgatgccaaaggaatcagccaggaacaaatgaatgagttccgggcttct
ttcaaccatttcgacagggaccactccggcacacttggccctgaggagttcaaagcctgt
ctcatcagcttgggttacgatattggaaacgatgcacagggagaggcagagtttgcccgc
atcatgagcatcgtcgaccctaaccgtatgggagtggtgacgttccaggccttcattgac
ttcatgtcccgggaaacggcagacacagatactgctgaccaggtcatggcttccttcaag
atcctggctggagataagaactacatcactgtggacgagttacggcgagagctgcctccc
gaccaggcggagtactgcattgctcgcatggctccctacaccggccgcgacgctgtgcct
ggtgccctggactacatgtccttctccacggcgctctacggtgaaagtgacctttaa
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