Pogoniulus pusillus (red-fronted tinkerbird): 135175514
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Entry
135175514 CDS
T10504
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppus03000
]
135175514 (SOX1)
Transcription factors [BR:
ppus03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135175514 (SOX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135175514
NCBI-ProteinID:
XP_063999804
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All DBs
Position
5:complement(32067441..32070555)
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AA seq
371 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGQTGAGGGGGGGGGGNKANQDRVKRPMNAFMVWSRGQ
RRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRK
TKTLLKKDKYSLAGGLLSAGSAGGGPAGVGVGMGVGVSPGGVGQRLESPGGTASGGYAHM
NGWANGAYPGSVAAAAAAAAMMQEAQLAYSQHPGSGGHPHHPHPHHPHHPHNPQPMHRYD
MGALQYSPISNSQGYMSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAASSGALGALGSL
VKSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAAAAQSRLHSLPQHYQSAST
GVNGTVPLTHI
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcactcccccggtggagcccaggcccccacg
aacctctcggggcagaccggagcgggaggcggcggtggtggcggcggcgggggtaacaaa
gcgaaccaggaccgggtcaagagacccatgaacgctttcatggtgtggtcgcggggccag
cgacggaagatggcccaggagaaccccaaaatgcacaactcggagatcagcaaacgcctg
ggggccgagtggaaagtcatgtctgaggccgagaagagaccgttcatcgacgaggcgaaa
cggctgcgggcgctgcacatgaaggagcatccggattataaataccggccacggaggaag
accaagaccctgctcaagaaggacaagtactcgctggccggggggttgctgagcgccggc
tcggccggaggaggcccagccggcgttggcgtgggtatgggagtcggcgtcagtcccggc
ggcgtcgggcagcggctggagagccccggcggcacggctagtggcggctacgcgcacatg
aacggctgggccaacggcgcctacccgggctcggtggcggcggcagcagcggcggcggcg
atgatgcaggaagcgcaactcgcctacagccagcacccgggcagcgggggacacccgcac
catccgcacccccaccacccgcaccacccgcacaacccgcagccgatgcaccgctacgac
atgggcgccctgcagtacagccccatctccaactcgcagggctacatgagcgcctcgccc
tcgggctacggcgcactgccctacggctcccagccccaccagaactcggcggcagcggcg
gcggcggcggcagcggcggcagccgcctcctcgggagcactgggcgccctaggctcgctg
gtgaaatcagagcccagcgtaagcccgcccgtcacctcgcactcgcgggccccgtgcccc
ggggacctgcgggagatgatcagcatgtacttaccagccggggaaggtggggatccggcg
gccgccgccgcccagagccggctccactctctgccccagcactaccagagcgccagcacg
ggggtgaatggcaccgtccccttgacgcatatctga
DBGET
integrated database retrieval system
