KEGG   Pogoniulus pusillus (red-fronted tinkerbird): 135175523
Entry
135175523         CDS       T10504                                 
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
ppus  Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04382  Cornified envelope formation
ppus04510  Focal adhesion
ppus04512  ECM-receptor interaction
ppus04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ppus00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    135175523 (COL4A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    135175523 (COL4A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    135175523 (COL4A2)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    135175523 (COL4A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppus04147]
    135175523 (COL4A2)
   00536 Glycosaminoglycan binding proteins [BR:ppus00536]
    135175523 (COL4A2)
Exosome [BR:ppus04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   135175523 (COL4A2)
Glycosaminoglycan binding proteins [BR:ppus00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   135175523 (COL4A2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 135175523
NCBI-ProteinID: XP_063999833
LinkDB
Position
5:complement(33011729..33175817)
AA seq 1715 aa
MDISQLPGARSFVCQDLGLLLILMEVMLSAVKVDAGGKKYTGPCGGRDCSGGCQCFPEKG
SRGQPGLLGAQGFTGPPGLMGIPGVQGPKGHKGERGYPGISGPKGEVGQRGVTGFPGADG
IPGHPGQPGSRGKPGHDGCNGTVGDPGDSGTPGFSGFPGTIGVQGPKGQKGEPYILPPDI
ASQYRGEPGDPGLNGFQGSPGALGIEGPAGPRGVRGRPGPPGPPGPQGPQGNRGLGFYGE
KGEQGPPGPPGPPGLPTRELMGVPSDKHKGERGEPGQKGEAGIPGVLLFPLEKGEEGVMG
YPGQRGLPGINGFPGLSGDRGFPGFDGPPGGYGPRGSKGEQGEMGPPGPVSYFPSRIPRK
GARGDPGFPGASGLQGDPGEEGDRGAPGLPGFSDADGDKPGLPGEMGPKGEKGELGSPAY
QMGPPGFPGKHGEPGLRGPPGPIGFPGALFGLKGQEGIPGRFGMQGFPGPRGQKGPKGEE
GDCSTCLLSDEMRRGSTGPPGPPGFPGTPGQPGRKGEPGDEGPHGVPGYPGPKGRSGPDG
FPGPKGEKGESLYITTKGTKGIRGDPGQPGIRGQDGFPGRDGSDGLPGQPGLPGDGIRGF
PGDPGYPGELGPKGFPGEAGLPGEGFPGQKGYRGPPGDRGQDGSPGPPGLPGLPGEPGQL
DCGQVIEDFSRGDASEPIWSGAGCVRPPKGSQGRPGLPGATGAKGARGFPGDPGPVGYPG
LNGSRGDPGREGFPGPPGFTGPRGDRGPNGLPGLQGHPGLTGKSGAPGAAGPKGLPGDVL
GAPAGSRGDIGLPGFPGLKGMPGDQGVPGIRGADGTPGLPGAKGDPGPQGLPGLMGLPGA
PGTRGFPGLPGNPGPDGRPGPQGPLGPPGIRGDDGEQGFPGPVGLKGLAGDKGETGYPGL
QGTRGVTGPPGISGMDGFPGDKGLKGSPGIDGFKGMTGLKGRPGIKGFKGEFGLLGAQGD
KGSQGARGFKGDRGDQGPPGEPPKIKPSMMMEVKGEKGDVGERGTKGFFGLKGSKGMPGV
PGKTGTPGSPGHPSYVAGAKGDIGAKGLTGLKGYPGPAGSPGIRGFPGSTGGRGEKGVPG
IAGHFGTPGSHGEIGDRGDTINLPGMPGLKGEVGVPGLTGTRGNIGPKGEGGDPGFPGIE
GIRGTQGVPGSVGQEGLPGLVGPPGQQGSSGTPGSKGEKGTRGWPGLPGQPGLPGSRGIG
GLHGLPGTKGLPGSPGPDGYGSAGMPGAVGDKGEAGEPSRVEGSRGPPGQKGDRGVPGIP
GPLGIPGQDGFPGLPGVSNISGYPGDKGSPGLDGVPGYPGLQGQPGIPAPPGSKGESGLI
GVIGETGPKGSRGDPGLPGRPGVPGYPGPKGRKGEQGVIGFMGAVGFPGDLGPIGPKGDR
GVTGFQGPPGSPGPTPLPPRLVAEQGSPGPRGNIGPQGSPGDTGPQGPPGDPGFRGSPGE
AGLQGTGGIPAPPGSRGEQGPSGFQGPVGFEGQPGRPGSPGLPGMPGRSVNMGYLLVKHS
QSDQEPMCPVGMNKLWNGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICY
YASRNDKSYWLSTTAPLPMMPVAEDDIKPYISRCAVCEAPAVAIAVHSQEASIPHCPEGW
RSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWL
TTIDQPFQSKPSADTLKAGLIRSHISRCQVCMKNL
NT seq 5148 nt   +upstreamnt  +downstreamnt
atggacatctcgcagcttcccggtgcacgtagttttgtttgtcaggatctggggcttctg
ctgatcctgatggaggttatgctgtcagccgtcaaagtggatgctggtggaaagaaatac
acaggaccatgtggaggcagagactgcagtggaggctgtcagtgttttcctgaaaaagga
agccgtggccagccgggactccttggagcacagggattcactggaccaccaggattgatg
gggatcccaggagtgcaaggtcccaaaggtcacaaaggtgaaagaggatatccaggaata
agtggacccaaaggagaagtgggacaaagaggagttactggattccccggggcagatggc
attcctggtcatccagggcagccaggatcaagggggaaaccaggtcatgatggctgtaac
gggacagtaggtgaccctggtgactcaggaactcctgggttctctggtttccctggcacc
attggagtccaagggccaaaaggccagaagggggagccctatatattgccaccggacatc
gcaagtcaatacaggggagaacctggggatccaggactcaatggctttcagggatctcca
ggtgctctgggaattgaaggacctgctggtccacgaggagtgcgaggaagaccaggacca
ccagggcccccaggaccacaaggaccacaaggcaacaggggccttggtttctatggagaa
aaaggtgaacagggccccccaggtcctccaggtccaccagggcttcctacaagagaactg
atgggtgtcccctctgacaaacacaagggtgaaagaggagagcctggacaaaagggggaa
gctggaattccaggtgtacttctctttcctcttgaaaaaggtgaagaaggggtaatgggc
tacccgggacaaaggggactgcctggcatcaatggttttccaggactcagtggagacaga
ggttttccaggatttgatggcccaccaggtggctatggtcctagaggaagcaagggggag
caaggcgaaatgggtcctccaggaccagtctcctattttccttcacgcatcccaaggaaa
ggtgcaagaggcgatccaggctttccaggtgcttctggactacagggagacccaggagaa
gaaggagatcgtggtgcccctggtcttcctggattctctgatgcggatggggataagcca
ggcttacctggagaaatgggaccaaaaggcgagaaaggtgaattaggatcccctgcttat
cagatgggcccacctgggttcccgggtaagcatggggaaccaggactccgtggtccgcct
ggccccattggattccctggtgctctctttggattaaaaggacaagagggaatcccaggt
cgatttggcatgcaaggtttccctgggccaagaggacaaaaaggacctaaaggtgaagaa
ggggattgcagtacatgccttctgagtgatgaaatgagaaggggctctactggaccccct
ggccctcctggctttccaggaacccctggccagcctgggagaaagggagaacctggtgat
gaaggaccacatggtgttccaggttaccctggaccaaaaggacgttcaggtccggatgga
tttcctgggccgaaaggagaaaagggagagtctctttacataactactaaaggcaccaaa
ggaatccgaggggatcctggacagcctggcatcagaggtcaagatggtttcccaggcaga
gatggatcagatggtttaccaggacagcctggccttccgggtgatggtatcagaggtttc
cctggcgatcctggttatccaggtgaattaggcccaaagggttttccaggagaagcaggc
ctgccaggtgaaggatttcctggtcaaaaagggtaccggggtcctcctggtgaccgtgga
caagatggaagcccaggacctccaggtctgcctggtctgccaggggagcctggccaacta
gactgtgggcaggtcatcgaagacttttctagaggagatgcaagcgagccaatatggtca
ggtgcaggctgtgtgaggccaccgaagggatctcaaggcaggccaggacttccaggagcc
acaggtgcaaaaggagcaagaggattcccaggtgatccaggtccagtaggatatcctggg
ctaaatggtagtcgaggtgatccgggacgggaaggatttccaggtcctccaggctttaca
ggacccaggggagacagaggcccgaacggtctgcctggactgcagggacacccaggcctt
acaggaaaatctggtgctccaggagcagcaggaccaaagggccttcctggtgatgtttta
ggagcaccagcaggttcccgaggggacattgggcttcctggcttcccggggttaaaaggc
atgccaggagatcaaggagtaccaggaattagaggagcggatggtaccccaggtttgcca
ggagccaaaggagatccagggccacaaggtctccctggtttgatgggattgccaggtgca
ccaggaacacgaggattcccagggctaccaggaaaccctgggcctgatggcaggcctggc
cctcaaggacctcttggtccacctggtattagaggagacgatggagagcaaggttttcct
ggccctgtgggcctgaaaggtctggctggtgacaaaggtgaaacaggctacccagggtta
caaggtacacgtggtgtgactggtccccctggcataagtggaatggatggctttccagga
gataaaggcttaaaaggttcacctggcattgatggcttcaaaggcatgacaggcctaaag
ggaagaccaggcatcaagggattcaaaggagaatttggcctgcttggggctcagggtgat
aaaggctcacagggtgcacgtggctttaaaggtgaccgtggggatcaagggcccccagga
gaacccccaaagatcaagcccagtatgatgatggaagttaaaggtgaaaaaggagatgtt
ggagaaaggggaaccaagggattctttggcttaaaaggtagcaaaggaatgccaggtgtc
cctggaaagacaggaacaccagggtcccctgggcatcccagctacgtggccggtgcaaaa
ggggacattggtgcaaaagggctgacaggtctaaaaggatatcctggtccagctggctct
cctggcatcagaggcttccctggcagcacaggagggaggggagaaaagggtgttccagga
attgcaggccattttggtacacctggctcacacggtgaaataggtgatcgaggagatact
ataaacttaccaggaatgccaggccttaaaggagaagttggtgtgccaggcttaacaggc
acaagaggaaacataggaccaaaaggtgaaggtggtgatcctggtttccctggcattgaa
ggcatcaggggcacgcagggtgtccctggctctgtgggacaggaaggtttgccggggctt
gttggacccccagggcaacaaggaagctctgggacacctggatctaaaggcgaaaaggga
actcgtggctggcctggcttaccaggacaaccaggcttgcctggctcaaggggaattggt
ggactgcatggtttaccaggcactaagggcttgccaggatcaccaggtccagatggctat
ggctctgcagggatgccaggtgcagtgggtgacaaaggggaagcaggagagccaagcaga
gtggaaggcagccgaggaccgccgggtcagaaaggagacagaggtgtcccaggaatcccg
ggacccttgggtattcctgggcaggatgggtttccaggccttcctggggtttcaaatata
tcaggatatcctggtgataaaggctccccaggtctagatggagtgccaggctacccggga
ctacaggggcaacctggaataccagctccaccaggaagcaaaggagaaagtggtctaata
ggtgtgattggagaaacgggtccaaaaggaagtagaggtgatcctggattaccagggaga
cctggtgttcctgggtatcctggaccaaaaggtcgtaagggcgagcaaggtgtcatcggc
ttcatgggcgcagtaggatttccaggtgatctggggcccattggacccaagggagacagg
ggagtaactggctttcagggccctccaggctctcctggtccgacccctcttcctccaagg
ttggttgctgagcaaggttcaccaggcccccgtggaaatataggacctcagggaagccca
ggagatacaggacctcagggtccaccaggcgatccaggtttcagaggctcacctggggaa
gcaggactccagggcacaggcggtattccagctcctcctggctccagaggtgaacaagga
ccatcaggttttcagggtccagtgggatttgaaggtcagccaggccgccctggtagcccc
gggttgcctggcatgccaggtcgcagcgttaacatgggctacctgctggtgaagcacagc
caatccgatcaagagccaatgtgcccagtcggcatgaacaaactctggaacggatacagc
ctgctgtactttgaaggacaggagaaagcacacaaccaggatttagggctggctggttca
tgcttggctcgcttcagtactatgccattcctctactgtaaccctggcgatatctgttac
tatgcgagtcgaaatgataaatcctactggctctcaactacagcacctcttccaatgatg
cctgtggcagaagatgacattaagccatacatcagtcgctgtgcagtttgtgaggcccca
gctgtggcaatcgccgtccatagccaagaagcttctattcctcactgccctgaaggctgg
cgcagtttatggattggatattccttccttatgcacactgctgcaggtgatgaaggtgga
ggacagtcactggtttctcctgggagctgcctggaggatttcagagcgactcctttcatc
gaatgcaacggtgcacgtggaacctgtcactacttcgcaaacaaatacagcttctggctc
actacaattgaccagcccttccaaagcaagccctcagcagacacgctcaaggcaggactc
atccgaagccacatcagcagatgtcaagtctgtatgaaaaatttatag

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