Pogoniulus pusillus (red-fronted tinkerbird): 135175812
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Entry
135175812 CDS
T10504
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03013
Nucleocytoplasmic transport
ppus05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135175812 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
135175812 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppus03019
]
135175812 (NUP98)
03036 Chromosome and associated proteins [BR:
ppus03036
]
135175812 (NUP98)
Messenger RNA biogenesis [BR:
ppus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135175812 (NUP98)
Chromosome and associated proteins [BR:
ppus03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135175812 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
135175812
NCBI-ProteinID:
XP_064000198
LinkDB
All DBs
Position
6:417448..460993
Genome browser
AA seq
1814 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTSSTFGQSAGFGTTSGGAFGTSAFGSNSNTGGLFGTTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSSSLFGTTSTGGGLFSSQSNAFTQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGAAAGIFGSSTATSSTATG
LFGGSTTNTGFSYGPNKTAFGTSTTGFGTGTTGGLFGQASQTSSLFNKPFGQPTTTQNTG
FSFGSTTLGQPNTSTMGLFGVTQPSQSGGLFGAPANTNAGTAFGTGTGLFGQPNTGFGVG
GSTLFGNKPTGFGTTTTSAPSFGTTTGGGLFGFGTNTAGNSLFGNKTATGTLGTGLGTGF
GTALGAGQTSLFGSTQPKLGGTLGSGAFGAPGFSTSAAPLGFGAPQPAVALADPGASAAQ
QALLQQHLNSLTYSPFGDSPLFRNPMADPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQSAGSAKSQLFDGLDDDEPALSNGAFMPKKSIKKLVLKNLNSSKLFSPGTRD
TEELASPAEYPENGDRFFLSVPPEENHRGEGEREEEEEPQEVTRFYTNPIAKPIPQSPDS
SAHRHPPSSTNNVDDTIVALNMRAALRNGLEGSSEDASCQEDSLQDEREEEPEAPQHLHP
AGIVLTRAGYYTIPSLEELSAYINDNNECLVTDFTIGRRGYGSIYFEGEVNLTNLNLDEI
VHIRRKEVIVYPDDEKKPPVGEGLNRRAEVTLDGVWPTDKSSRCLIKSPQRLGELNYEGR
LEAVSRRQGARFKEYRPETGSWVFQVAHFSKYGLQDSDEEEEDQTAKVDTKKLKTTPVPP
PGLLPPQQMALNGKPTPPAQSPEVEQLGRVVELDSDMADITQEPAQELGGEDSLAEEQEA
VPASTHIASTLGVNPYVLQIMKASLLADEDDLDLILDHGHLGKPPQQLDTSQELCSPRLP
ISRAHGQKRASVGGLLQSKFASLFHPPAAAPQALKALQAPGSPPPPGPWSAAPPLSPLAA
SVSLPAAPPELALRAVGVRRQQGLVPLEVSIAYGKGRLLMDMGLFMGRSFRVGWAPCWTL
AHCGQRLGSAPAQRPLPERRLPAPAAALSESPFKVHLEKLSLAQQEGAGAQQLYLTPLEI
KLKHSTVHMDQPCPLLAPNPGVAAVHDYASWVRKAAEDSAGAEGAVVRAWCLAWTLCEAL
WGRLPGLAGSPDPPPGHSPEPPRGHSLAEPRGHSLALQRRGAFSRWLSAAAAARVQQEVS
LAPRGHHLDAVFSYLTASRVGEACRLAQQAGDHRLALLLSQLAGSQPVRDLLTMQLVDWH
RLQADAFIQEERLRIFALLAGKPVWQLSERISINICSQLDWKRCLALHLWYLLPPTASIS
AALGMYEAAFQNSPASEKYACCPLPPYLEDSGCVLEEEDHGGRPLRDVSFHLLKLYSDRH
YDLDQLLDPRSVTSDPLDYRLSWHLWEVLRALNFTHLGQQSQGVLNVGYAAQLESEGLWE
WSIFILLHQPDPRLREKAVRELLSRHCQLQESPEGWAKETFLTQRLCVPPAWIHEAKAVR
ARVEGDKHKEAFFLFKAGHWNQCHRLVVRHLASDAIINENYKYLKGFLEDLAPPERSSLI
QEWELAGLVYLDYILVIEMVDRIQQLDCSPYELERLHTKVTSLCSRVEQLQCHSAKDRLA
QSEMAKRIANLLRVVLSLQQLPEAPPEPLAELQKVPLRLLAPHLGRLPMPEDYALEELRS
LTQAYLRELTLWTH
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcctttgggaccccctttgggggcagcacaggctttgggacctcctcc
acctttggccaaagtgctggctttggtaccacgagtgggggagcctttggcacctcagcc
tttggctccaacagcaacactggaggcctctttgggaccacccagacaaagccaggaggc
ttgtttggctccaccaccttcaaccagcctgccacctcctccaccagcactggctttggc
tttggcacctccactggcacctccagcagcctctttggcaccaccagcacggggggaggc
ctcttctcctcccagagcaatgccttcacccagaacaagcctgctggctttggcaacttt
ggaaccagcaccagcagtggaggcctgtttggaaccaccaacaccacttccaaccccttt
ggcagcacttctggctctctctttgggccaaccagcttcacagcagctccaactggcacc
accatcaagttcaaccctcccactggcactgacaccatggtcaagtctggggtgagcacc
aacatcaacaccaagcaccagtgcatcacagccatgaaggagtacgagagcaagtccctg
gaggagctgcgtttggaggactaccaagccaacaggaaaggtccttccaacccagtagga
gcaggagcagctgctgggatctttgggtcctccacagccacgtccagcacagccacaggg
ctctttggtggctccaccaccaacacaggcttctcctacggccccaacaagacagccttt
ggaaccagtaccactggctttggcacgggcaccacaggagggctctttggccaggcctcc
cagaccagcagcctcttcaacaagccctttggccaaccaaccaccacgcagaacacaggc
ttcagcttcggcagcaccacgctggggcagcccaacaccagcaccatgggtctctttggg
gtgactcagccctcccagagcggaggcctcttcggcgcccctgcgaacaccaacgctggc
actgcctttggcactggcacaggcctctttgggcagcccaacacaggctttggtgttggt
ggctcgaccctgtttgggaataaacctactggctttggcaccaccaccaccagtgccccc
tcctttggcaccaccacagggggaggcctctttggttttggtaccaacactgctgggaac
agtttgtttggaaacaaaactgcaactgggaccctggggacaggcctggggacaggcttt
ggaacagctctgggagcagggcagacctccctcttcggcagcacccagcccaagctgggc
ggcaccctgggcagcggcgccttcggcgcgccaggcttcagcacctcggcggctccgctg
ggcttcggcgccccccagcctgctgtggccctggcagaccccggggcctctgctgcccag
caggccctcctgcagcagcacctcaacagcctgacctactcccccttcggggactctccg
ctcttcaggaaccccatggcagaccccaagaagaaggaggagaggctgaaaccaaccaac
ccagcagctcagaaggctctgaccaccccaacccactacaagctgactcctcggcctgcc
accagggtgcggcccaaggctctgcagtctgcaggctcggccaagtcccagctctttgat
ggcctggatgatgatgaacctgccctctccaacggggccttcatgcccaagaagagcatc
aagaaattggtgttgaagaacctcaacagcagcaaactcttctctcctggcactcgagac
accgaggagctggcatctcccgcagagtaccccgagaacggggacaggttcttcctgtcg
gtgccccccgaggagaaccaccgcggggagggggagcgtgaggaggaggaggagccccag
gaggtgactcggttctacaccaaccccattgccaagcccatcccccagagcccagacagc
tctgcccacaggcacccccccagcagcaccaacaacgtggatgacaccatcgtggccctc
aacatgagggcagccctgaggaacggcctggagggcagcagcgaggatgcctcctgccag
gaggattccctccaggatgagagggaagaggagccagaggccccccagcacctgcaccct
gccgggattgtgctgaccagagctggttactacaccatcccctccctggaggagctctct
gcctacatcaacgacaacaacgagtgcctggtcacagacttcaccatcggccgcagaggc
tatggctccatctacttcgagggggaggtgaacctgaccaacctcaacctggacgagatc
gtccacatccgccgcaaggaggtcatcgtctaccctgacgacgagaagaagcctcccgtg
ggggaaggcctcaacaggcgagccgaggtgactctggacggggtgtggcccacggacaag
agctccaggtgcctgatcaagagcccgcagcgcctcggggagctcaactacgagggcagg
ctggaggcagtgtcccgcaggcagggagctcgcttcaaggagtaccgccccgagaccggc
tcctgggtcttccaggttgctcacttctccaagtacggcctgcaggactcagatgaggaa
gaggaagatcaaactgccaaggtggacaccaagaagctcaaaaccactcctgtgccccct
ccagggctgctcccaccccagcagatggccctcaatggcaaaccaactcctccagctcag
agccccgaggtggagcagctgggcagggtggtggagctggacagtgacatggcagacatc
acccaggagcctgcccaggagctgggaggagaagacagcctggcagaggagcaggaggct
gtgccagcctctacccacatcgcctccaccctgggggtcaacccttacgtcctgcagatc
atgaaggcttctctgctggctgatgaggatgacctggatctgatcctggatcatggccac
ctcgggaagccacctcagcagctggacacctcccaggagctctgctctcccaggctcccc
atctccagggcccatggccagaagagagcctcagtcggtggcctgctccagtccaaattc
gccagcctcttccacccccccgccgctgctcctcaagcgctgaaggctctgcaggctccg
ggcagccctcccccgccggggccgtggtctgcagcccctcccctgtcgccgttagccgcc
agcgtctcgctgcccgcggccccccccgagctggcgctgcgggcggtgggggtgcggcgg
cagcaggggctggtgccgctggaggtctccatcgcctacggcaagggcaggctgctgatg
gacatggggctcttcatggggcgctccttccgcgtgggctgggcaccctgctggaccctg
gcacactgcgggcagcgcctgggcagcgcccccgcgcagcgccccctgccggagcgccgc
ctgcctgcgcccgccgcggcgctctcggagtctcctttcaaggttcacttggagaagctg
agcttggcccagcaggagggggctggagcccagcagctctacctcacccccctggagatc
aaactgaagcacagcactgtccacatggaccagccctgccccctcctggcacccaaccct
ggcgtggctgctgtccacgactatgccagctgggtcaggaaggcagctgaggactctgct
ggggcagaaggagctgtggtcagagcctggtgcctggcgtggaccctgtgcgaggcgctg
tggggcaggctgccagggctggctggcagcccggacccccccccggggcacagcccggag
ccgccgcgggggcacagcctggcagagccgcgggggcacagcctggcactgcagcgccgc
ggagccttctcccgctggctctctgccgccgccgccgcccgcgtccagcaggaggtgtcc
ctggcaccccgcggccaccacctcgacgccgtcttcagctacctgactgccagcagggtg
ggggaggcctgcaggctggcacagcaggcaggtgaccacaggctggcactgctgctctcc
cagctggcagggagtcagcctgtgcgggacctgctgaccatgcagctggtggactggcac
aggctgcaggctgatgccttcatccaggaggagaggctcaggatcttcgccctcctggct
gggaagcctgtgtggcagctgtcggagaggatcagcatcaacatctgctcacagctggac
tggaagcgctgcctcgccctgcacctctggtacctgctgccccccacagcctccatctct
gctgccctgggcatgtatgaggcagcattccagaacagcccagccagtgagaaatatgcc
tgctgccctctgccaccctacctggaggactctggctgcgtcctggaagaggaggatcat
ggaggaaggcctctgagggatgtctccttccacctcttgaagctctacagtgacaggcac
tacgacctcgaccagctgctggacccccggagtgtgacctcagaccccctggactaccgc
ctgagctggcacctctgggaggtgctgagggccctcaacttcacccacctgggccagcag
agccagggagtgctgaacgtgggctatgctgcccagctggagagcgaaggcctctgggag
tggagcatcttcatcctcctccaccagccagacccccggctgcgggagaaggcggtgcgg
gagctgctgagtcgccactgccagctgcaggagagccctgagggctgggccaaggagacc
ttcctcacccagaggctctgtgtgcccccagcctggatccacgaggccaaggcagtccga
gccagggtggagggggacaagcacaaggaggctttcttcttgttcaaggctggccactgg
aaccagtgccacaggctggtggtcaggcacctggcctcagatgccatcatcaatgagaac
tacaagtacctgaagggcttcctggaggacctggccccaccagagagaagttctctgatc
caggagtgggagctggcaggcctggtctaccttgactacatcctggtgattgagatggtg
gacaggatccagcagctggactgttccccctacgagctggagaggctgcacaccaaggtg
acctcactctgcagcagggtggagcagctgcagtgccacagcgccaaggaccgcctggca
cagtcagagatggccaagcgcattgccaacctgctgcgggtggtgctcagcctgcagcag
ctgcccgaagcccccccggagcccctggcagagctgcagaaggtgcccctgaggctgctg
gcaccgcacctgggccgcctgcccatgcccgaggactatgccctggaggagctgcgcagc
ctcacccaggcctacctgcgggagctgactctgtggactcactga
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