Pogoniulus pusillus (red-fronted tinkerbird): 135175904
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Entry
135175904 CDS
T10504
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppus03016
]
135175904 (TRUB1)
Enzymes [BR:
ppus01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
135175904 (TRUB1)
Transfer RNA biogenesis [BR:
ppus03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
135175904 (TRUB1)
Prokaryotic type
135175904 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
135175904
NCBI-ProteinID:
XP_064000392
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Position
6:complement(7507588..7545182)
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AA seq
286 aa
AA seq
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MAAREAGGVVLGKSADKLFSLSGLFAVYKPKGPTSAGVLNLLKERLLAEAGVQTDGTRRN
QVLKIGHGGTLDSAAAGVLVVGIGKGTKMLSTMLTGSKKYTAIGLLGKATDTLDATGKVT
EEKPYDQITKGDLENVLRKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVK
VYSLSLQQFQPPLFTLDVECSGGFYVRSLVSDIGKELSTCALMQELTRTKQGPFTLEEHA
LYEDKWTIDEIARSLEHCTSLLSGEPAHKKLKTEHPGETAVSCEDK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccgggaagcgggaggggtggtgttgggcaagtccgccgataagctcttctct
ctgagcgggctcttcgccgtgtacaagcctaaggggcccacctcggccggcgtgctcaac
ctcctgaaggagaggctgctggcagaagctggtgtgcaaacagatgggaccagaagaaat
caggttttgaaaattggacatggtggaactttggacagtgcagcggcaggagttctggtg
gttggtattggaaaaggaacaaaaatgctgagtactatgttgacaggttccaagaagtac
actgccattggactgctgggcaaagctactgatacattagatgctacaggaaaagttact
gaagaaaaaccttatgaccagataacaaaaggagatcttgagaacgtgctgcggaagttc
acaggggacataatgcaggttcctccgctctattcagctttgaagaaggatggagaaagg
ctatcaactctgatgaagagaggagaagcagtcgaagccaagcctgctcggccagtcaaa
gtgtacagtctctctctccagcagttccagccaccactgttcacactggatgttgaatgt
agtggtggcttttatgtcaggagcctggtcagtgacattggcaaagaactctctacctgt
gccttgatgcaagagctgacccgaaccaaacaagggccatttaccctagaggagcatgcc
ctttatgaagacaaatggacaattgatgaaattgcacgatccttagagcattgcacatct
cttctctcaggagagccagctcataaaaaattaaagacagagcatcctggcgaaactgct
gtgagctgtgaagataagtga
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