Pogoniulus pusillus (red-fronted tinkerbird): 135175997
Help
Entry
135175997 CDS
T10504
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03410
Base excision repair
ppus03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
135175997 (POLL)
03450 Non-homologous end-joining
135175997 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppus03400
]
135175997 (POLL)
Enzymes [BR:
ppus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
135175997 (POLL)
DNA repair and recombination proteins [BR:
ppus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
135175997 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
135175997 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
BRCT_2
HHH_5
LIG3_BRCT
NTP_transf_2
HHH
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
135175997
NCBI-ProteinID:
XP_064000604
LinkDB
All DBs
Position
6:complement(14552190..14564226)
Genome browser
AA seq
593 aa
AA seq
DB search
MLQPAVAAELHIKPMEPQGIVKAFPKRKKVRDDSGRIIPPKIPKERGTEVPEEWLKPVTA
YVLQAGIGQARAKIFHEQILQNGGAVHNQLSSEVTHIIVAEDMDCDRAFRLLKLTRLPSG
LQLVKASWLSACIRDQKLLSTAGYGVFISRRYLEEGELQEEQQRQALGSEEIQSPADEGA
AKPNTEAQVEDTLQQDLGTLGQQQLAEKDSDDEDSEGEDANVTQGDLEALISGHYPVKSS
EETSDSSAIVAQPVSKWVCAQSSNSKKVNHNQCITEKLEVLAKAYSVQGDKWRALGYSKA
INALKSYHKPITSYQEACKIPGVGKRMAEKILEILESGHLRKLDHISESVPVLELFSNIW
GAGVKTAQMWYQQGFRTLDDIRSKATLSSQQAVGLKHYTDFQERMPREEAAQIEQTVRQA
ALALKPGLVCVACGSYRRGKPTCGDVDVLVTHPDGQSHRGVFSKLLDSLHRSGFLTDDLV
SQEDNGDQKKYLGVCRLPGPAQRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKT
KGMSLSEHALSSAVVRGPGGTKVASGHILPTPTERDVFIQLGLPYREPSERDW
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagccagcagttgcagctgaacttcacataaagccaatggagccacaagggatt
gtcaaagcttttcccaaaaggaagaaggtgagggatgactcagggcgaatcatccctcca
aagatcccaaaagagagaggaacagaagtacctgaggagtggctgaagccagtcactgcc
tatgtgttgcaagctggcattggccaagccagggccaagatcttccatgagcagattctc
cagaatgggggtgctgtacacaaccagctgtcctcagaggtcacacacatcattgtggct
gaagatatggactgtgatcgggcctttcggctccttaaattaaccaggctaccttcgggg
ttgcagctagtgaaggcctcgtggctgagtgcttgcatcagagatcagaagctgctgagt
actgctggctatggtgtctttatctctcgcaggtacctggaggagggagaactacaggaa
gagcaacagcggcaggccttgggcagtgaagagatccagtccccagcagatgagggagca
gcaaaaccaaatactgaagcacaggttgaggataccttgcagcaagacctgggcaccctt
ggacagcagcagctggctgagaaagactctgatgatgaagacagtgaaggagaagatgct
aatgtcacccagggagatctggaagcattgatttctggccactaccctgtgaaatcatca
gaggagaccagcgacagctctgccatagtggcccagcctgtcagcaagtgggtttgtgcc
cagtcctccaacagcaagaaggtgaatcacaaccaatgcatcacagagaagctggaagtg
ttggcaaaggcctactctgtccagggggacaaatggagagctctgggttactccaaagcc
atcaatgcccttaagagctaccacaaaccaatcacctcctaccaggaagcctgtaaaatc
cctggggttgggaaacggatggcggagaagatcctggagatcttggagagcgggcacctg
cgcaagctggatcacatcagtgagagtgtgcctgtgctggagctcttttccaacatctgg
ggagcaggggtcaagacagctcagatgtggtaccagcagggtttccggacgctggatgat
atccgcagcaaggcgacgctcagcagccagcaggcggtggggctgaaacactacaccgat
ttccaggagcgcatgcctcgagaggaagctgcacagatagagcagaccgtcagacaagct
gccctggccctgaagcctggactcgtgtgtgtggcatgtgggtcctaccgtcgggggaag
cccacctgtggagatgtggatgtgctggtcactcacccagatgggcagtctcaccgtgga
gtgttcagcaagctgcttgacagccttcacagaagtggcttccttacggatgacctggtg
agtcaggaggacaatggtgatcagaagaagtacctgggggtgtgccgcctccctgggccg
gcccagcgtcaccgccggcttgacatcatcgtggtgccttacagcgagtttgcctgcgct
ctgctctacttcaccggctcggctcacttcaaccgctctatgcgggccctggccaagacc
aaaggcatgagcctctccgagcatgccctcagctcggccgtggtgcgaggccctggaggc
accaaggtggcatctggccacatactgcccactcccactgagagagatgtcttcattcag
ctggggctgccctaccgggagccctcagaacgagactggtga
DBGET
integrated database retrieval system
