Pogoniulus pusillus (red-fronted tinkerbird): 135176017
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Entry
135176017 CDS
T10504
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppus03036
]
135176017 (MMS19)
03400 DNA repair and recombination proteins [BR:
ppus03400
]
135176017 (MMS19)
Chromosome and associated proteins [BR:
ppus03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135176017 (MMS19)
DNA repair and recombination proteins [BR:
ppus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
135176017 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
135176017
NCBI-ProteinID:
XP_064000649
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All DBs
Position
6:complement(15232328..15248644)
Genome browser
AA seq
1022 aa
AA seq
DB search
MAAAGARVAALAAAVQDFVSGQQDGRAAEVAAGMKDGNWTVLQLVEALGSCLENTDPRMR
GRGIQLLSQVLLQCYSLLQEKEVLHLVLFYENRLQDHHLVIPSVLQGLRALSMCEVLSPG
LAVSVLKAIFQEVHVQSLLQLDRHTVYSIIINFMSSREEELKGLGADFTFGFIQMMDGEK
DPRNLLVAFQIVRDLIAKNYALGPFVEELFEVTSCYFPIDFTPPPNDPHGIQREDLILSL
RAVLASTPQFAEFLLPLLIEKMDSDLQSAKLDSLQTLTACCAIYGQKELQEFLPSLWSSL
RREVFQTASEKVEAECLAALHALSACLSRSVLSSDTEDLLDSFLSNILQDCRHHLCEPDM
KLVWPSAKLLQAAAGASLRAYYRITRVVLPLLLEQYTKHPQSSQRRTILEMLLGFLELQQ
KWGLVEEDESTLLSLRASICSVVFSALTDPSVQLQLIGIRALTVLGSLQGFLSHSDLELV
ADHLIRLTLHEDSQSSEAAMEAAASLAPIYPKVFSGHMVPRLEEELRSEREEESSHDHCS
LRQRCLQALAAVSTHTSIVKETVPVLLQHLRKLQKGSESGTIQGMVSVCQSLHRVALQCQ
KDDDGCWYFHQTVVPCLLAMAVQAAMQESAHPLLGKALIEEEVLTAMVPVISAATTHLSP
ELAAQSVSHVVPLFLDGEVSFLPQNSFPCSFQPFEDGECFDTQRRLVALLMAFVCSLPCK
VAIPQQDRLLRELLALSCSCNCPFTATTAAKCFAGLVNKHPAGQQLDEILQLAVNRMEPS
LVEGPRRMQALTLLLWVTKALVLRYHPLSSHLTDKLLGLLSDVELGPVAADGFSLLMADS
PDVLHKGCHADVRIMFRQRFFTNNVPKLVQGFHGAGPDVKANYLKGLSHVLNHLPKPVLV
TELPTLLSLLLEALSCSDCVVQLSTLSCLQPLLLEAPQIMSLHVDTLVTKFLSLTSSPTM
AVRIAALRCAHALTSLPATVLLPYKARVIRALAKPLDDKKRLVRKEAVAARGEWFLLGSP
GR
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccggggcgcgggttgcggcgcttgccgccgccgtgcaggacttcgtgtct
gggcagcaggatggccgcgccgcagaggtggcggcagggatgaaagatggaaactggact
gtactgcagcttgtggaagccctagggtcttgcttggagaacacagaccctcggatgcga
gggcgaggcatccagctgctgtcacaagtcctgctccagtgttactccctgctccaggag
aaggaagtgctgcatctggtcctgttctacgagaaccggctgcaggatcatcacctcgtg
atcccctcagtgctccagggactccgagcgctgagcatgtgtgaggtgctgtccccaggg
ctagcagtgtctgtgctcaaagccatcttccaggaggtacatgtgcagtccctgcttcag
ctggaccgccacacagtctacagcatcatcattaacttcatgagctccagggaggaagag
ctgaagggcctgggtgctgacttcacctttggcttcatccagatgatggatggagagaag
gatcctcgcaacctgctcgtggccttccagattgtgcgtgatctcattgccaagaactac
gccctgggtccctttgtggaggagctgtttgaagtgacatcctgctatttccccattgat
tttactccacctcctaacgatcctcatggcatccagagagaagacttgatcttgagtctt
cgggctgtactggcctccacaccccaatttgctgagttcctgcttcctctgcttattgag
aagatggactcagacctacaaagtgccaagcttgactccctgcagactctgactgcctgc
tgtgccatctatgggcagaaggagctgcaggaattcctccccagcctctggtcatctctg
cgcagggaggtgttccagacggcgagtgagaaggtggaggcagagtgcctggctgcgctg
catgctctctcagcctgcctctcccgctctgtgctcagctctgacaccgaggatctgctc
gactccttcctcagcaacatcctgcaagattgcaggcaccatctgtgcgagccagatatg
aagctggtgtggcccagtgccaaactcctgcaggcagcagcgggtgcctctctccgtgcc
tactaccgcatcacccgcgtcgtcctgcccctgctgctggagcagtacaccaagcacccg
cagagcagccagagaagaacaatcttggaaatgcttctgggcttcctggagttgcagcag
aagtggggactggtagaagaagatgagagcactctgctgtcacttcgagcctcaatttgc
tctgtggtgttctcggcactgacggatcccagtgtgcagctgcagctgattgggatcagg
gcactgactgtcctgggctccctgcaaggcttcctgtctcactctgacctggagctggtt
gcggatcacctcatccgtctcactctgcatgaagattcccagagcagtgaagcagcgatg
gaggcagctgcatctctggcccctatctacccaaaggttttctctggccacatggtaccc
aggcttgaagaggagctgcggtcagagcgggaggaggagagctcccatgaccattgctcc
ctgcggcagcgctgcctgcaggccctggcagctgtgtctacccacaccagcatcgtgaag
gagactgtccctgtcctgcttcagcatctccggaagttgcagaaagggagcgagtctggg
accatccaaggcatggtctccgtgtgccagagcctgcaccgcgtggccctacagtgccag
aaggacgacgacggctgctggtacttccaccagacagtggtaccatgcctgctggccatg
gctgtgcaagctgccatgcaagagagcgcccacccactgctgggcaaagcactgatagaa
gaagaggtgctgactgccatggttcctgttatcagcgctgccaccactcacctgagccct
gagctggctgcccagagtgtgtctcatgtggtgcccctctttctggatggagaggtctcc
ttcctgccccagaacagttttccctgctccttccagccctttgaggatggtgagtgcttt
gacacacagagacgcctggttgccctccttatggcctttgtctgttctttgccctgcaag
gtggcaattcctcagcaggaccggctgcttcgggagctgttggcactgagctgctcctgc
aactgccccttcacagccaccacagctgccaagtgctttgcagggctggtgaacaagcac
ccagcaggacagcagctggatgagattctgcagcttgcagtgaacagaatggagcccagc
cttgtggaggggccccgacgaatgcaagcactcacactgctgctctgggttaccaaagct
ctggtgttgcgctaccaccccctgagttcccacttgacggacaagctgctaggcctgctg
agcgacgtggagctgggtcctgtggcggccgacggcttctccctgctcatggccgactcc
ccggacgtgctgcacaagggctgccatgccgacgtgcgcatcatgttccggcagcgcttc
ttcaccaacaacgtccccaagctggtgcagggcttccacggggctggtcctgatgtgaag
gcaaattacctgaagggtctgtcccacgtgctcaaccacctccccaagcctgtgctggtg
acagagctgccgacgctgctttctctgctgcttgaggccttgtcctgctcagactgtgtg
gtgcagctctccacactgagctgtctccagccactgctgcttgaagctccccagatcatg
agtctgcacgttgacacactggtcacaaagttcctcagcctcacctccagccccaccatg
gctgtccgcattgctgccctgcgctgtgcccatgcacttaccagcctacctgcaactgtg
ctgctgccatacaaggccagagttatccgggcactggcaaaacctttggatgacaagaaa
aggctggtacggaaggaggcagtggcagcacggggggaatggttcctgctggggagccca
gggaggtga
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integrated database retrieval system
