Pogoniulus pusillus (red-fronted tinkerbird): 135176241
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Entry
135176241 CDS
T10504
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135176241 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppus04990
]
135176241 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
ppus04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
135176241 (LDB3)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
135176241
NCBI-ProteinID:
XP_064001182
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All DBs
Position
6:complement(31152016..31293224)
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AA seq
684 aa
AA seq
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MAYSVTLNGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQMNQGDLVVAIDGVNTDSM
THLEAQNKIKSASHNLSLTLQKSKRPVPVSTTAPRIESPRAVIPHQQEPAWEINGNRATF
SPLTNTATGPMGSILATNGTCSGYFNKQEISFSNSSSYLKTTTVRSSMSSQSVTPDMSPA
KSNLGSKPSPVLSGGTSAVSPSRQYNNPIGLYSAETLREMAEMHKLSLNRRASEGGLPRG
TLPIKDPHVDSASPVYQAVLKTQNKPEDEPEDWSRRSANLQSRSFRILAQMTGTEYMQDP
DEEALRRSRDKENVAEASQNSTPVEHAPVSTSAASTPVPHASAPQPATAAQITTSMMTPP
ATTSVVQESFSSSFQRNTSQSYTPMPVSGSYSENPAASKQRVVTTASIKPSVYQPAPAPA
HSYTPTNAEPASRPPWVTDDSFSQKFAPGKTTTTITKHILPVGAPGPSPASTSAYPSPVS
TSSRAPAIARGTVQRAERFPASSRTPLCGHCNSIIRGPFLVAMGRSWHPEEFNCAYCKKS
LADMCFVEEQNSVYCERCYEQFFAPTCARCHTKIMGEVMHALRQTWHTSCFVCAACKMPF
GNSLFHMEDGEPYCEKDYIALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVN
LEGQPFYSKKDKPLCKKHAHAINV
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcttacagcgtgactctgaatggacctggaccatggggtttccgactgcaaggaggc
aaggacttcaacatgcccttgaccatctccagaatcacccctggcagcaaggcagcacag
tcacagatgaaccagggagaccttgtggtagccattgatggagtcaatactgacagcatg
acccacttagaggcccagaacaagatcaaatcagccagccacaacttgagcctcactctt
cagaagtctaaacgcccagtgccagtttccaccacggcacccagaattgagtctcccagg
gctgtaattccccaccagcaggagcctgcttgggaaatcaatggcaacagagcaaccttc
agtcctctaactaacacggcgactgggcctatgggtagtattttagcaaccaatggaacg
tgttcaggctacttcaacaagcaagagatcagcttttcaaatagttcttcctacttaaag
actaccacagttagatcttccatgtcctctcagtctgtgactcctgacatgtcacctgca
aaaagtaatctaggttcaaaaccaagcccagtattgagtggtggcactagtgctgtgagc
ccctcaaggcagtataacaaccctattggcctttactcagcagagactctaagggaaatg
gctgagatgcataaattaagtctcaaccgaagggcttcggaaggtggacttcctagaggt
acccttcctattaaagatcctcatgtagacagtgcctctccagtgtaccaggctgtgctt
aaaacccagaacaagcctgaagatgagcctgaagactggagtcgccgttctgctaatctg
cagtctagatctttccggatccttgcccagatgactggaacggagtacatgcaagatcca
gatgaagaagccctgaggaggtcaagagacaaagaaaatgttgctgaagcatcacaaaac
agtacccctgttgagcatgctccagtgtctaccagtgctgcctctactcctgtaccacat
gcttcagcacctcagcctgctactgctgctcaaattacaaccagtatgatgacaccacca
gcaaccacctcagtagtgcaagagtctttctcatcctccttccaaagaaacacaagccag
tcatatacaccaatgccagtttctggaagctacagtgaaaatcctgctgcttcaaaacag
agagttgttactactgccagcataaagccttctgtctaccagccagcaccagcaccagct
cattcctacacccccaccaacgctgagcctgcgagtcgccctccctgggtaacagatgac
tccttttcccagaaatttgcacctggaaaaaccaccaccactatcacaaagcacatccta
ccagtgggtgctccaggaccatctcctgcctcaacttctgcttacccatctccagtttca
acttcttcccgggctcctgcaatagcccggggaacagttcagagggctgagcgttttcca
gccagcagccgaactcctctctgtgggcactgtaacagcataattcggggtcctttcctg
gtagctatgggtcgctcttggcacccagaagaattcaattgtgcttactgcaagaaatcc
ttggctgatatgtgctttgtggaagagcagaatagtgtgtactgtgagcgctgttacgaa
cagttctttgcaccaacctgtgccagatgccacactaagatcatgggggaagtgatgcat
gccctaagacagacttggcacacaagttgctttgtctgtgctgcttgtaagatgccgttt
gggaatagcctttttcacatggaagatggagaaccctactgtgagaaagattacattgct
ttgttcagcacaaaatgccacggctgtgattttcctgttgaagctggagataaattcatt
gaagctcttggacacacttggcatgatacctgcttcatttgtgctgtatgccatgtgaat
ttggaaggtcagccattctactccaagaaggataagccattgtgcaagaagcatgcccat
gccatcaatgtttaa
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