Pogoniulus pusillus (red-fronted tinkerbird): 135176276
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Entry
135176276 CDS
T10504
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppus03036
]
135176276 (JMJD1C)
Chromosome and associated proteins [BR:
ppus03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
135176276 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
FYVE
zf-C5HC2
C1_2
Motif
Other DBs
NCBI-GeneID:
135176276
NCBI-ProteinID:
XP_064001266
LinkDB
All DBs
Position
6:complement(35082047..35260772)
Genome browser
AA seq
2535 aa
AA seq
DB search
MAVAVETRPELVGKRFLCVGGGGGGEEPPESGRWRAGVIRAVSQRDSHSPDLAVYVEFDD
LEWEKREWVKVYEDFATFLVEYQLVWVKRKDPSQTQGSKIKQIQWPALTFKPLVGKSVYN
SITAVEFLVDKQLDFITEDSAFQPYQDDVDSLNPVLRDNPQLHEEVKAWVKEQKVQEIFM
QGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMVVMNDQVLEPQNVDPSMVQMTFL
DDVVHSLLKGENIGITSRRRSRSNQNSNTVHGHYTRAQANSPRPAMNSQTAAPKQNSHQQ
QKNTRLNKRKGSDSSMPDEEKMKEERYDYIGRGETPKNKTKNFVSKRRKPEEDEKKLNMK
RLRTDNISDYSESSDSEISNKRLTDSSSEQNSENELKSKNTSKINGEEGKSQTTEGVEQT
LTDRQSPWDEIQEDKNHEETERLKSSILDQQEKSSLHAAEQPTPYEQSAKDPHVQECSAQ
KHHSAEVKNEQFVPRPPTPKCVVDITNENNSEKESQDNAAASTLGLQTVQKIESHSSDLK
QQFANANFVEARKQEADQSWVSSVANKTDLIQPGLVKTLSVNEHLNPEKEKLQYGSFMSS
LNVASLAEESKLHKQSPVPDSGKSKPSTSVDHPKTKSPDVKPKFTQSSDTVKSKVSSQNS
HATGLTRSANKTDHDLPRSSFHPVPARVSALEATKSPLIIDKNEHFTVYRDPTLIGQETG
TNHISPYLHQHNYPLHSSSHRTCLNPNAHHPALTGSSHLLAGSSAQAPLSAINTHPLSSA
SHHSVHHPHLLPAVLPGVPAASLLGGHPRLETAHASSLSHLALAHQQQQQMLQHQSPHLL
GQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNTEASLRRNTPSPWL
HQPTPVTSADSLGLLSHIPVRPSSADPLRPLKLTTHSSPPLSKSIVEHHKEELERKTFIE
PLRSVSTAQVKTELEQGRTQTAKESHMHRHFVDPMLNQLPRPPQETGERLSKYKEEHRRI
LQESIEVAPFTAKIKALEGERENYSRVTSLSSSPKSHSVKYDKDAERSVSELYKMKHSVP
QSLPQSNYFTTLSNSVVNEPPRSYPSKEASSTYVDKQANCPSTAASAQSLPSYISSLSKP
PPLIKHQPESEGSVGKISEQLSQSVQSHSVNSFRSDSRSPTQLSISSSNTLRSMPALHRA
PVFHPPVHQNLEKKESSYSSLSPPTLTPVQPVNAGGGKIQELQKPPTLVPEPKEAQAVYK
GSSEQNVSEMWKSSNAPSNEKADWHAERMSGKSQSATASVIVRPPSTKYESASVMQSAPK
DRLSERSSAVTNQADCLKTAETRETGRVILPNMNSDSARTQYEKKFPAVLQGSVPHAATP
TTTMICSTKTDVTTSAATTTSVSSWGSSEVTYSLSSTVLACTPLESTASRAAGQVVAQAQ
ECKVSTPALVTPAAGKAGSAAQPSTGLSTSTDFVHLKKHKAALAAAQFKSSNSSEAECNS
VKNQTFSTSLPLDSAVGCNTANKANPVGSGQTSQASQPNYHTKLKKAWLTRHSEEDKNTN
KKENSGNSVSEIIKPCTVNLIASTSNDLQNNIDSKILADKFVKEDKHPRRKAKRTYESGS
ESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKKKGDAEEEVKPNGVLSRSAKEKSKLKL
QSSSNSTGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRSKKGEEP
THSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEALSLWTHENYEDDELDLETSKYI
LDIIGDKFCQLVTSEKTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGF
VVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHNIRE
KFEIKSHCQCTSKQSTQSGKLPAMNGVSQVLQNVLNHSNKISLCMPESQQQNTPQKSETN
GNTSPRSDVSTDSKLTPPESQSPLHWLADLAEQKAREEKKENKECPSGKHSKEEKDQDSL
ESQNCKSSPPASQNNEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGAASGKSGRSM
PNILDDIIASVVENKIPPNRAPKINAKSEIKDEPKDDKNCVQDECSNRYSDIQYSWICDK
HVLWLKDHKNSNNWKLFKECWKQGRPVLVSGMHKKMNFSLWKAESISVDFGNQQADILNC
KDSIISNTNVKEFWDGFEDVSKRQKIKNGETALLKLKDWPSGEDFKAMMPARYEDLLKSL
PLPEYCSPEGKLNLASHLPGFFVRPDLGPRLCSAYGVAATKDHDIGTTNLHIEVSDVVNI
LVYVGIAKGNGVLSKSGVLKKFEEEDLDDLLRKRLKDSSELPGALWHIYAGKDADKIREF
LQKIAKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTVIQFLGDAIILPAGAL
HQVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLSKEEINYDDKLQVKNILYHAVKEMVR
ALKIHESEMEDMDEN
NT seq
7608 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtggagacgcggccggagctggtggggaagcggtttctgtgcgtcggc
ggcggcggcggcggcgaggagccgccggagagcgggcgctggcgggccggggtcatccgc
gctgtctcccagcgggactcccacagccccgacttggcggtgtatgtggaatttgatgac
cttgaatgggaaaagcgagaatgggttaaagtttatgaagattttgcaaccttcttggtg
gagtaccagctggtctgggtgaaaagaaaagacccaagccagactcagggatcaaagatc
aaacaaattcaatggcctgcattgacattcaagcccttggttggaaaaagtgtatacaat
tcaattactgcagtagaattccttgtggacaaacagctggattttataactgaagatagt
gcctttcagccctatcaggacgacgtagacagtctaaacccagttctcagggataacccg
cagttacatgaggaggtaaaagcctgggtaaaggaacaaaaggttcaggagatttttatg
caaggtccgtactccttaaatggttacagggtgagagtgtacagacaggattctgccacc
cagtggttcactggtatcatcacccatcatgatctcttcacccgcactatggttgttatg
aatgaccaggtgttagaacctcagaatgttgatccttctatggttcagatgacctttcta
gatgatgttgttcactctttgttgaaaggtgaaaatattggtatcacttcacgccgacgg
tctcgttccaaccagaacagcaacacagtccacggtcattatacacgtgcacaagcaaat
agtcccagaccagcaatgaattcccaaactgcagcaccaaaacagaattctcaccagcaa
caaaagaatactcgcctaaataagaggaaaggctctgatagcagcatgcctgatgaagag
aagatgaaagaagaaagatatgattatataggtcgaggagaaacccccaaaaacaaaact
aaaaactttgttagcaaaagaagaaaacctgaagaggatgaaaaaaaactaaatatgaag
aggctgcggacagacaatatctcagattactctgagagcagtgactcagaaatttcaaat
aaaagattaacagattcatcctcagagcagaattcagaaaatgagttaaaaagcaagaac
acttcaaagataaatggagaagaaggaaaatcccaaactactgagggagtagaacagaca
ctaacagatagacagtctccgtgggatgaaatacaggaggataaaaatcacgaggagaca
gaaagactgaagtcatccatcttagatcagcaggaaaaatcttctctccatgcagcagag
cagccaacaccttacgaacagagtgccaaggatccacatgttcaggagtgcagtgcacaa
aaacatcattctgcagaagtaaagaatgagcagtttgtacccagacctcctactccgaaa
tgtgttgttgacattactaatgaaaacaactctgaaaaagagagccaggataatgctgct
gcaagtacccttggtttgcaaacggttcagaaaatagaatctcacagtagtgatttaaaa
cagcagtttgctaatgcaaattttgttgaagcaagaaaacaggaagctgatcaaagctgg
gttagcagcgttgctaacaaaacggatttgatacaacctgggcttgtaaaaacattgtca
gtaaatgaacacttaaatcctgagaaagaaaagttgcagtatggctcctttatgtcttcg
ttaaatgtagcttctctagcagaagagagtaaactgcataagcaaagtccagtccctgat
tctgggaagtcaaaacctagtacttcagttgatcatcctaaaacaaagtcacctgatgtt
aagcctaaattcacccaatcttctgatactgtgaagtctaaggttagttcccaaaacagc
catgctactggattaacaaggtcagccaataaaactgatcatgatttgcctaggtctagt
tttcatccagttccagctagagttagtgcgctagaagctactaaaagtcctcttatcatt
gacaagaatgaacatttcacagtgtacagggaccccactctgattggacaagaaacagga
actaatcacatttcaccttatttgcatcagcataattatcctctgcattcctcatcccac
cgaacctgtttaaatccaaacgctcatcatcctgcattaactggttcatcccatctgcta
gctgggtcttcagctcaggcgcccttgtccgctattaacactcacccccttagtagcgca
tctcaccattctgttcatcaccctcatctacttcccgcagtgttacctggagtgcctgct
gcctccttgctgggtggccacccgcgactagagactgctcatgctagcagcttaagccat
ttggcattagcacaccagcaacagcaacagatgttacaacaccagtctccacatcttctt
ggacaagctcatccttctgcttcctataatcagctagggctttatccaattatttggcag
tatccaaatggaacacatgcttactcaggacttggtctgccctcctccaaatgggtccac
ccagaaactcctgttaacactgaggcttccttgagaaggaatactcccagcccatggttg
caccagcctaccccagtgacctcagctgacagccttggtttattgagtcacattcctgtg
agaccatccagtgcagatccccttcgacctctcaaactgaccacgcattccagtccacca
ttgtccaaaagcatcgtagagcatcataaagaagaactggagaggaaaacgtttattgag
cctttacgttctgtttcaactgcccaagtaaagactgagctagagcaaggcagaacacag
acagcgaaggagagccatatgcacagacattttgtagatccgatgttgaaccagctgcca
aggccaccacaggagactggggagcgactgagcaagtacaaagaagaacacagacggata
ctccaagaaagtattgaagttgctccttttacagctaaaataaaggcactggagggagag
agagagaactattccagggtaacatccttatcttcaagtcccaaaagccattcagtaaaa
tatgacaaagatgctgagcgctctgtgtcagaactgtataaaatgaagcattcagttcca
caaagtttgccacagagtaactatttcactactttgtctaacagtgtagtaaatgaaccg
ccgaggtcatacccctcaaaggaagcttcaagtacgtatgttgataagcaagccaactgt
ccttcaacagcagctagtgcccagtctctcccctcttacatttcttctctttcaaagcct
ccacctttaattaagcaccaaccagagagtgaaggctctgtgggcaagatatctgagcag
ctttcgcagtcagtgcagtctcattctgtaaattccttcagaagtgatagcaggagccct
actcagttgtcaatctcatcttcaaatacactccggagtatgcctgccttgcatagagcc
cctgtgtttcacccccctgtgcaccagaacctggagaagaaggaaagcagttacagcagc
ctttcacctccaactctaacccctgttcaacctgttaatgctggtggtggcaaaatacag
gagctgcagaaaccaccaacattggtacctgagcctaaggaagctcaggctgtttacaag
ggctcctctgaacagaatgtatcagaaatgtggaagtccagtaacgccccaagtaatgaa
aaagcagattggcacgctgagagaatgagcggaaagtcacagtccgctacagcatctgtt
attgtgcgtcctcctagcacgaaatacgagagcgcatcagtgatgcagtctgctcccaag
gatcgacttagtgagagatcttcagctgtgacaaatcaagcagattgcctgaaaacagcg
gaaactagggagactggaagagtcatcctgccaaatatgaactcagacagtgctcgcaca
caatatgagaagaaatttccagctgtcttgcaaggcagcgttcctcatgctgccacccct
accacgactatgatctgcagtaccaaaaccgatgtcactacgtcggcagcaacaactacc
agtgtgtctagctggggcagttcagaagtgacttactccttgtcgagcacagtgttggcc
tgcacaccgttagagagcactgcctcgagagccgcgggtcaggtggtggcacaggcccag
gagtgcaaggtcagcactccagctctggttacacccgctgctggcaaggcaggcagtgct
gctcagcctagcacggggctttccacgtccactgactttgtccatttgaaaaagcacaag
gcagcattggctgcagctcagtttaaaagtagtaacagtagtgaggccgagtgcaactct
gtgaaaaatcagacattttcaacctctctccccctagacagtgctgtcggctgtaataca
gcaaacaaagcaaaccctgtaggcagtgggcaaacttcccaggcaagtcagccaaactac
cacactaaactgaaaaaggcttggctgacaagacattcagaggaagataaaaacactaat
aaaaaagagaattcaggaaacagtgtttcagaaattattaaaccatgtactgtcaattta
atagcttctacatcaaacgatttgcaaaataacatagatagtaaaatcttggcagataag
tttgtgaaagaagataagcacccacggagaaaagcgaaacgaacttacgagtctggctct
gaaagtggagactctgatgaaagtgagagcaagtcagagcaaaggactaagcggcagcct
aagccaacttacaaaaagaaacaaaatgatttgcagaaaaaaaagggtgatgcagaggaa
gaagtaaaacccaatggtgttcttagcaggagtgcaaaagaaaaaagcaagctgaagcta
cagagcagcagtaacagcactggtatacctcgctcagtgttaaaagactggcgcaaagtc
aagaagctgaagcaaacgggagagtcctttttgcaggatgattcttgctctgaaatagga
ccaaatttgcaaaaatgcagagaatgtaggttaataagaagtaagaaaggagaagaacca
actcactcaccagtattttgtagattttactacttccgacggttatcttttagtaagaat
ggagtggttaggatagatggtttctcctctcctgatcagtatgatgatgaagcactgagt
ttatggacacatgaaaactatgaagatgatgaactggacctagaaacatctaaatacatt
ctagatatcataggtgataaattttgtcagctagtaacatccgagaaaacagccatgtcc
tgggtgaagaaagatgccaaaattgcatggaagagagcagtgaggggagttcgtgagatg
tgtgatgcatgcgaagccacattatttaacattcattgggtctgccaaaaatgtggattt
gtggtctgcctagattgttacaaggcaaaggaaagaaaaagctccagagataaggagttg
tatgcctggatgaagtgtgtgaaggggcagcctcatgatcacaaacacctgatgccaaca
cagattattccaggctctgttttgacagaccttttagatgctatgcacaacattagagaa
aaatttgaaattaagtcacattgtcagtgtaccagcaagcagagcacacaatctggcaag
ctccctgcaatgaatggtgtatctcaggttttgcagaatgtcctcaaccacagtaataaa
atttctctgtgcatgcctgagtctcaacagcagaatactcctcagaagtctgagacaaat
ggtaatacaagtccaaggagtgatgtaagcacagacagcaagttaacaccacctgaatct
cagtccccactgcactggttagctgatcttgcagagcagaaagccagagaggaaaagaaa
gagaacaaagaatgtccttctggaaaacattcaaaggaagagaaagaccaggatagtttg
gagtcccaaaactgtaaaagctcccctcctgcctcccagaacaatgagcagggctcaacc
ttacgggatttattaactacaacagcaggcaaactgcgtctaggttctacagatgctggt
attgcatttgctccagtttactctacaggagcagcaagtggcaagagtggaaggtctatg
ccaaacattctcgatgacataattgcttctgtagtagaaaacaagattccaccaaacaga
gcaccaaagataaatgcgaagtctgaaattaaagacgagccaaaggatgataaaaactgt
gttcaggatgagtgcagtaaccggtacagcgatattcagtattcctggatctgtgataag
catgttctgtggctcaaagaccataaaaacagcaacaactggaagctgttcaaagagtgc
tggaagcaaggaaggcctgttttggtgtctggtatgcacaagaaaatgaacttcagcctg
tggaaagcagagtccattagtgtagactttggaaaccagcaagctgatatcttgaattgc
aaagacagtattatttcaaacaccaatgtcaaggagttctgggatggttttgaagatgtt
tcaaaacggcagaaaattaaaaatggggaaacagctctgctaaaactgaaggattggcct
tctggggaagatttcaaggctatgatgccagcaagatatgaggacttgctgaaaagttta
cctttgcctgaatattgtagtccagaaggaaaactgaacttggcttctcatctgcccgga
ttttttgttcgtccagatttgggacccagactatgcagtgcttatggtgtggctgctact
aaagaccatgatataggaaccacaaatctccatattgaagtttctgatgtcgtgaacatc
cttgtttatgttggtatagcaaaaggaaacggagtgctttccaaatcaggagttctgaag
aagtttgaagaggaagatttggatgatcttttaagaaagcggttgaaggactcaagtgaa
ttacctggtgctttatggcacatctatgctggcaaagatgctgacaagataagggagttt
ctgcaaaagatagcaaaagagcaaggcttagaggttctaccagaacacgatccaatccgc
gatcagagttggtacgtgaacaaaaagcttcgccaaagacttctggaggagtacggagtg
aagacctgcacggttattcagtttcttggtgatgccattattctaccagcaggagccctt
catcaggtgcaaaattttcacagttgcgttcaagtaactgaagactttgtgtctccagaa
catcttgtgcagtcatttcacttaacgcaggagctgaggctgtcaaaggaagaaatcaat
tatgatgataaactgcaggtcaaaaatatcttatatcatgcagttaaagaaatggtgaga
gctctgaagattcatgaaagtgaaatggaagatatggatgagaactaa
DBGET
integrated database retrieval system
