Pogoniulus pusillus (red-fronted tinkerbird): 135176303
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Entry
135176303 CDS
T10504
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppus03009
]
135176303
03036 Chromosome and associated proteins [BR:
ppus03036
]
135176303
Enzymes [BR:
ppus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135176303
Ribosome biogenesis [BR:
ppus03009
]
Eukaryotic type
Pre-60S particles
Helicases
135176303
Chromosome and associated proteins [BR:
ppus03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
135176303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
135176303
NCBI-ProteinID:
XP_064001343
LinkDB
All DBs
Position
6:37057953..37073783
Genome browser
AA seq
713 aa
AA seq
DB search
MPEATRFSASSEAESDSECPMETESSQESSRRRRKKEKKEKKSKRHEKSRKRKAETEESE
QSDDEPVSPKLKKSKSRIKQNGDAREESPENTRLSSSSIKSSHKKRHSNSSETSSGEGDS
EQEQEMTEEQKEGAFSNFAISKGTVQLLQARGVTYLFPVQVKTFNPVYSGKDVIAQARTG
TGKTFSFAIPLIEKLQGDSQERRRGRSPKVLVLCPTRELANQVAKDFKDITRKLTVACFY
GGTPYNGQIDLMRNGIDILVGTPGRIKDHLQNGKLDLTKVKHVVLDEVDQMLDMGFAEQV
EDILRVAYKKDSEDNPQTLLFSATCPHWVYDVAKKYMKSKYEQIDLIGKRTQKAATTVEH
LAIECHWSQRAAVIGDVIQVYSGSHGRTIVFCETKKEANELALNASIKQDCQSLHGDIPQ
KQREITLKGFRNGTFKVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGR
TGICICFYQRKEEYQLRYVEQKAGIMFKRVGVPTATDIIKASSKDAIRCLDSVPQTAIEY
FKESAQFLIQEKGPVNALAAALAHISGATSIEQRSLLNSDVGFVTMILRCSEEINNMSFA
WRRLRELLGEDVDRKVNRMCFLKGKMGVCFDIPAADQKDIEARWEDSKQWRLCVATELPE
LVESPRAGGGGGGGGGGNSRSFSSSRNGRRGGSGRSRFRSRGQKRSFDRAFDR
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagccacccggtttagcgccagcagcgaggccgagtcggattccgagtgcccc
atggagacagaatcatctcaggagagcagccgccggcggcgtaagaaggagaaaaaggag
aagaaatctaaacgccacgagaaatctcggaagagaaaggctgagacggaggaaagtgag
cagtcagacgatgagcctgtttccccaaagctcaagaaatcaaagagcagaattaaacaa
aacggtgatgcaagagaagaaagcccagagaacacgagattgtcttcctcaagcattaaa
tcctcccacaaaaagcgacacagtaattctagtgaaacctcaagtggtgagggagacagt
gagcaagagcaggagatgactgaagaacagaaagagggtgcattctccaattttgcaatt
tccaaagggactgttcagcttcttcaagctcgaggagtgacctacctgttccccgtgcaa
gtgaagaccttcaacccagtatattctggcaaagatgtaattgctcaggcacgaactgga
acagggaagacgttctcttttgcaattcctttaattgaaaagcttcagggagactcacag
gaaagaagaagaggccgttcaccaaaggtactagttctttgtccaacaagagagctggca
aaccaggttgccaaagattttaaggacatcacaagaaaactaacagtagcttgtttttat
ggaggaactccatataatggacaaattgatctcatgagaaatggcattgacattttggtt
ggaacacctggtcgaatcaaagaccatcttcagaatggcaagctggaccttaccaaggtg
aaacatgttgttcttgatgaagttgaccagatgctggacatgggatttgctgagcaagtg
gaagatattttacgtgttgcatacaagaaggattcagaagacaatccccagacgctactg
ttttctgcaacttgcccacattgggtgtatgatgtggctaagaaatacatgaagtctaaa
tatgaacagattgaccttattgggaaaagaactcaaaaggctgctacaacagtagaacat
ttggcaatagaatgtcactggtctcagagagctgctgttattggagatgtcattcaggtc
tacagtggcagccatgggagaaccattgtcttttgtgagaccaaaaaggaggcaaatgaa
ctggctctgaatgcttcaatcaaacaggattgccagtcattgcatggtgacattcctcag
aaacaaagggaaattaccctgaaaggttttagaaacggtacttttaaagttctggttgca
accaatgttgctgcccgtggtttagatattcctgaagttgacctggttgtgcaaagttca
ccaccaaaggatgtggagtcctatatccaccgctctggacgcacaggtcgagctggacgg
actgggatctgtatctgcttttatcagcgaaaagaagaatatcagttaagatacgtggaa
caaaaagcgggcattatgttcaagcgtgttggtgttcctactgcaacagatataataaag
gcttccagcaaagatgccatcaggtgtctggattctgttcctcagactgctattgagtat
ttcaaagaatctgctcagttcttaatacaagaaaagggaccagttaatgctctggcagca
gccctagcccatatttcaggcgctacttccattgaacagcgttccctgctgaactcggat
gtgggatttgttaccatgatattgcgctgctcagaagaaataaacaatatgagctttgct
tggcgaagattgcgagaactgctgggtgaagatgttgatcggaaggtgaacagaatgtgt
ttcctcaagggaaaaatgggtgtgtgctttgatattcctgcagcagaccaaaaggacata
gaggcaagatgggaagactccaaacagtggcgtttgtgcgtggcgactgaattacctgag
ttagtggaatcgccacgagcaggaggaggaggtggtggtggtggtggtggaaacagccga
agcttctcaagctccaggaatgggcggcgtggtggctctggtagaagcaggttcagaagc
agaggccagaaacgaagttttgacagagcattcgatcgttaa
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