Pogoniulus pusillus (red-fronted tinkerbird): 135176391
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Entry
135176391 CDS
T10504
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04510
Focal adhesion
ppus04517
IgSF CAM signaling
ppus04518
Integrin signaling
ppus04519
Cadherin signaling
ppus04520
Adherens junction
ppus04810
Regulation of actin cytoskeleton
ppus04820
Cytoskeleton in muscle cells
ppus05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135176391 (VCL)
04518 Integrin signaling
135176391 (VCL)
04519 Cadherin signaling
135176391 (VCL)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135176391 (VCL)
04520 Adherens junction
135176391 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
135176391 (VCL)
04810 Regulation of actin cytoskeleton
135176391 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
135176391 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppus04812
]
135176391 (VCL)
04147 Exosome [BR:
ppus04147
]
135176391 (VCL)
Cytoskeleton proteins [BR:
ppus04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
135176391 (VCL)
Exosome [BR:
ppus04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135176391 (VCL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
135176391
NCBI-ProteinID:
XP_064001609
LinkDB
All DBs
Position
6:complement(47888136..47944412)
Genome browser
AA seq
1066 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAIR
QILDEAGKAGELCAGKERREILGTCKTLGQMTDQLAELRARGQGATPMAMQKAQQVSQGL
DLLTAKVENAARKLEAMTNSRQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMAEARKVAE
LCEEPKERDDILRSLGEISALTAKLSELRRHGKGDSPEARALAKQIATSLQNLQSKTNKA
VANTRPVKAAVHLEGKIEQAQRWIDNPTVADRGVGQAAIRGLVAEGRRLANVMMGPYRQD
LLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLKTRMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPSDAPNRDEVFDERAANFENHAAKLGATAEKAAAVGTANKTTVEG
IQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANVQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEHLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEAINQPMMM
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtctttcacacgcgcaccatcgagagcatcctggagcctgtggcccagcagatc
tcccacctggtcatcatgcacgaggagggggaggtagacggcaaggccattccggacctc
accgcccccgtgtcggccgtgcaggccgctgtcagcaacttggtgcgggttggaaaagag
actgtgcagacaacagaagaccagatcctgaaaagggatatgccaccagcattcatcaaa
gtggagaatgcctgcaccaaacttgttcgggcggcacagatgctgcaagcagatccttat
tcagtaccagctcgtgactatctaattgatgggtcaagaggcatcctttctggaacatca
gacttacttctgacatttgatgaagcagaggtccgtaagattatccgagtctgcaaagga
atattggagtatctgactgtggcggaagttgtagagaccatggaggatttggtgacgtac
acaaagaatctagggccaggcatgacgaagatggccaaaatgattgatgagagacagcag
gagttaactcaccaggaacacagggttatgctggtgaactccatgaatactgtgaaggag
ctattgcctgtactcatttcagccatgaagatttttgtaactacaaagaattcgaaaagc
caaggaatagaagaggccttgaaaaatcgcaatttcacagtagagaaaatgagcgcagag
ataaatgaaataatccgtgtgttacaactcacgtcttgggatgaggatgcctgggcaagc
aaggacactgaagccatgaaaagagctttagccttaatagactcaaagatgaatcaggca
aaaggttggctgagagatccaaatgcacctccaggcgatgctggtgagcaagcaataagg
cagatccttgatgaagctggaaaggcaggagaactgtgtgctggtaaagaacgcagagag
attctgggaacatgcaaaacactaggccagatgactgatcagctagctgagctccgagct
agaggacaaggtgctacacccatggctatgcagaaagcgcagcaggtgtcacaaggtctg
gatttgctcactgcgaaagtggagaatgcagcccgcaaactggaggccatgaccaactca
aggcaggcaattgctaagaagattgatgctgcccagaattggcttgcggatcctaacggg
ggcagcgaaggagaggaacatatccgaggaattatggctgaagcaaggaaagttgcagaa
ttatgtgaggagcctaaagaaagagatgatatccttcgttccttgggggaaatctccgct
ttgacggcgaagctgtccgaactgcgacgacatgggaaaggggattctcctgaggcccgt
gcactcgctaagcaaatagccacatcacttcagaatttacagtccaaaacaaacaaggct
gtagcaaataccaggccagttaaagcagctgttcatttggagggcaaaattgagcaagct
caaaggtggatagacaatcctacagttgctgatcggggagtaggccaggcagcaattcgg
ggtctggttgcagaaggtcgtcgtttagccaatgtcatgatgggaccttatcgtcaagac
ctgcttgccaaatgtgaccgtgtagaccagctggctgctcagctggctgaccttgcagca
agaggggagggagagtctcctcaggccagggcaattgctgctcagcttcaggactcgctg
aaggatcttaaaacacggatgcaagaggcaatgacccaggaggtttctgatgttttcagt
gacaccacaactcctattaaattgttagcagtagcagccactgctccctctgatgctccc
aatagagatgaggtgtttgatgaaagagcggcaaactttgaaaaccatgctgctaaactg
ggagccacagcagaaaaagcagctgcagttgggactgcgaataaaactactgtggagggc
attcaggcaaccgtgaaatcagcaagggaactcaccccacaggtagtgtcagcggctcgt
atcctcctgagaaatcctggcaatcaagctgcttatgaacattttgagaccatgaaaaac
caatggattgataatgtagaaaaaatgacagggttggtagacgaagctattgatactaaa
tctctcttggatgcatcggaagaggcgattaagaaagatctggacaaatgtaaagttgcg
atggccaacgtccagcctcagatgcttgtagctggtgctaccagcatagcgagacgagca
aaccgcatcctgctggtagcgaaacgagaggttgaaaattcagaagatcctaaattccgt
gaggctgtgaaagcagcctctgatgagctcagtaaaactatatcacccatggtaatggat
gctaaggctgtggctggaaacatttctgatcctggtttgcaaaagagtttcttggattct
ggatacaggattctgggagctgtggccaaagtcagagaagctttccagcctcaagaacca
gacttccctcctcctcctcctgaccttgagcaccttcacttgacagatgagcttgctcct
cctaaaccgccgcttccggaaggtgaggttcccccacccagaccaccaccacctgaagaa
aaggatgaagagttcccagaacagaaagcaggagaagctatcaatcaacccatgatgatg
gctgctaggcagctgcatgatgaagcccggaagtggtctagtaagggtaatgacatcatt
gctgctgctaaacgaatggcgctgctgatggcagagatgtcacgcctggtgagaggaggc
agcggaaacaagcgtgctcttattcaatgtgcaaaggatattgccaaggcatcagacgaa
gtcactcgattagccaaagaggtggcaaagcagtgcactgacaagcgcattagaaccaac
ctcttgcaggtttgtgagcgaatcccaaccatcagtacacagctgaaaattctctccacc
gtcaaagctaccatgctcggcagaactaatatcagtgatgaagagtcggaacaggcaaca
gaaatgttggttcataatgcccagaacctcatgcagtctgtgaaggaaactgtgagggaa
gctgaagcagcatccattaagattagaacagatgctggattcactcttcggtgggtcaga
aagaccccatggtatcagtaa
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integrated database retrieval system
