Pogoniulus pusillus (red-fronted tinkerbird): 135176422
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Entry
135176422 CDS
T10504
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppus03009
]
135176422
03036 Chromosome and associated proteins [BR:
ppus03036
]
135176422
Enzymes [BR:
ppus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135176422
Ribosome biogenesis [BR:
ppus03009
]
Eukaryotic type
Pre-60S particles
Helicases
135176422
Chromosome and associated proteins [BR:
ppus03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
135176422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
135176422
NCBI-ProteinID:
XP_064001645
LinkDB
All DBs
Position
6:37074747..37092450
Genome browser
AA seq
841 aa
AA seq
DB search
MEGGSPVEAGGAGGGPDVRCPGSRGSWRKGPAGQRRRKRRARSGPARSGRMGGVWGRAAR
LGFCATRTAAAGPLSDRRWLGWLSGAAAGPLLLLALPRGPVRPPAALGAAPHFLRAGAER
SAWGRRYETGGGSSTSSVAVYIPGEQSLAMPAAGPAASPAEPQTPSGEESLRRGRRRKAK
EGSRAKVKRLSKIEGEQTQPEENGLGDGDIEPPVAKKTKKVKEKANGLAGETNVCEHTVN
FSSAVSNGVTSQSASGDTDAGEQDSVAEELTEEEKEGAFSNFPLTQDTINLLKARGVKYL
FPVQVTTFQPIYDGKDVIAQARTGTGKTFSFAVPLIEKLQSVSQDGRRGRAPKVLVLVPT
RELATQVARDFKNLTRKLSVACFYGGTPYKEQLDILKSGIDILVGTPGRIKDHVQNSKLD
LSSVKHVVLDEVDHMLDMGFAEQVEEILGFAYKKDSENNPQTLLFSATCPRWVYDVAKKY
MKDEYEQIDLIGKKTQRTATTVEHLAIQCRSSQRAGVLGDIIQVYSGSRGRTIVFCETKR
EANELAMNASLKQDAQSLHGDIPQKQREITLKGFRNGVFEVLIATNVAARGLDIPEVDLV
VQCSPPKDVDSYIHRSGRTGRAGRTGVCICLFQRREEDLLKQVEHKAGITFKRVGVPTAT
DVIKASSDDAKKLLEAIPPAAVDYFRKSAQELIDEKGAVAALAAALAHISGASYVQQRSL
LNSTAGFVTMVLKCSIEMHTMGYAWRGLKEQLGEEVDEKISSMRFLKGKMGVCFDIPVGE
LSNIQEQWSDTRRWQLSVAKELPELEELPQEAGRGFSRFGYGRQGGSGGGFKRSNWFKNG
N
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgggagcccggtggaggcaggaggagcaggcggcggacccgacgtgcggtgc
cccggcagccggggaagctggaggaagggaccggcggggcagcgccgccggaagaggcgg
gctcggtcggggccggcgcgcagcggccgcatgggtggcgtgtggggtcgggcagcgcgg
ctcggcttctgcgcgacccgaacagcagcagcgggcccgctcagcgaccggcggtggctg
ggctggctgtcaggtgccgcggcgggcccgctgctgctgctggcgctgccccgcggccct
gtccgcccgccggccgcgctcggcgccgcgcctcacttcctgcgcgccggggcggagcgc
agcgcctggggacgccgctacgagaccggcggcggcagcagcactagcagcgtcgccgtg
tacatccccggagagcagtcgctcgccatgcccgccgccgggcccgccgccagccccgcc
gagccgcagacaccgtcgggagaggagtctcttcgccgcggccgccggagaaaggccaag
gaggggagccgggcgaaggtgaagcggctcagcaagatcgagggggagcaaacccaacct
gaagagaacgggctgggggacggtgacattgagcctcccgtggccaagaagacaaaaaaa
gtcaaggagaaggcaaacggtttggctggagagaccaacgtctgcgagcacacggtgaat
ttttcctctgctgtaagcaatggtgtgacatcccagagcgcctccggggacactgacgct
ggagagcaagacagcgtagcggaggagctgacagaagaagaaaaagaaggtgccttctcc
aatttccctctcacccaagacaccatcaaccttctcaaagctcgaggtgtaaagtacctg
ttccctgtgcaagtgacgacttttcagcccatctatgatggcaaagatgtaattgctcaa
gctcgaacaggaactgggaaaaccttttcttttgctgttccactgattgaaaaacttcag
agtgtctcacaagatggaagaagaggccgtgcaccaaaagtgctggttcttgttccaacc
agagaactggccactcaggtagccagagacttcaagaatctcaccaggaaactgtcagtg
gcttgtttttatggagggactccatataaagaacagcttgatatccttaaaagtggcatt
gatattctagtgggaactcctggacgaatcaaagaccatgttcagaatagcaaactggat
ctttccagtgtgaagcacgttgttttggatgaagttgaccacatgttagacatgggcttt
gctgaacaagtggaagaaatcttaggatttgcttataaaaaagattctgagaacaacccc
cagacactactgttttctgcaacttgtccacgatgggtatatgatgtagcaaaaaagtac
atgaaagatgaatatgaacagattgacttgattggaaagaagactcagaggactgccacg
actgtggaacacttggctatacagtgtcgctcatcacagagggcaggagttcttggggat
atcattcaagtctacagtggcagccgtgggagaaccatcgtcttctgtgagaccaaaagg
gaagcaaatgaactggctatgaatgcttcactcaaacaggatgcccagtcattgcatggt
gacattccacagaaacagagagaaattacattaaaaggctttagaaatggtgtgtttgaa
gttctgattgcaacaaatgtagctgcccgtggtttggatattcctgaggttgaccttgtt
gtacagtgttcaccaccaaaagatgttgattcctacatccatcgttctggacggacaggt
cgagctggacggactggagtctgtatttgtttatttcagagaagagaagaagatcttttg
aagcaggttgagcacaaagcggggattacgtttaagcgtgtgggtgttcctactgctaca
gatgtaattaaagcttcaagtgatgatgccaaaaagttgttggaggccattcctcctgct
gcagttgactacttcagaaaatctgctcaagagctcatagatgaaaaaggagcagttgct
gccctggctgcagctctagcccatatttctggagcatcttatgtgcagcagcgctcctta
ctcaactcaactgccggctttgtgaccatggtgttgaagtgttcaatagaaatgcatacc
atgggctatgcctggcgaggactcaaagaacagcttggggaggaagtagatgaaaaaatt
tcttcaatgcgtttcctcaaggggaagatgggagtgtgctttgatatccctgttggtgag
ctgagtaacatacaggaacagtggagtgacaccaggcgctggcaactatcagtggcaaag
gaattgcctgagctggaagagttacctcaggaggccggacgagggttctccaggttcgga
tatggaaggcaaggtggcagtggtggcggtttcaagagaagcaactggtttaagaatgga
aactga
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