Pogoniulus pusillus (red-fronted tinkerbird): 135176648
Help
Entry
135176648 CDS
T10504
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04140
Autophagy - animal
ppus04148
Efferocytosis
ppus05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135176648 (VPS18)
04148 Efferocytosis
135176648 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135176648 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppus04131
]
135176648 (VPS18)
Membrane trafficking [BR:
ppus04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135176648 (VPS18)
Hops complex
135176648 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
zf-RING_16
zf-RING_5
zf-RING_11
Lact-deh-memb
zf-ANAPC11
zf-RING_UBOX
zf-RING_2
zf_RING_Vps8
Nup54_57_C
LETM1_C
DUF5600
zf-rbx1
STX17_N
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
135176648
NCBI-ProteinID:
XP_064001871
LinkDB
All DBs
Position
1:27313329..27327053
Genome browser
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLYRSASVQQSRASVGIPHSGYVNARLEKETPIFNKQRIDFAPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTAQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGLEGKFFIMATTRKRLFQFVGKVPEGTE
QQGFSSIFAMHADHLPSFREFPANLGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSDERVWVYPSDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFL
EKFGLLTRMIKDPMVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLLKKLSNL
KPSEKTQTTLLTTWLTELYLNWLGVLEGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
EAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHHACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDILPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAVTSQPSKSHHRPKDADTISLGKGQQSREQLKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatcctggacgagtacgaggattccctgtaccgctccgcctccgtgcagcag
agccgcgccagcgtgggcatcccacactccggatatgtaaatgcacggctggagaaggaa
acaccaatatttaacaagcaaaggattgattttgctcctcctgagaaaattaacagcttg
gtggtctcctctaaccagctctgtatgagccttgggaaagacactcttctcaggattgat
cttgggaagccagatgaacctaatcaggtggagctgggacgcaaagatgaagccaaagtc
tacaagatgtttttggaccacacaggctctcacctcctgattgctctgaacaccagcgaa
tgcctttacctgaacagaagtgttcagaaagtgcgagcactctcccgctggaaaggccac
ctgatagaaagtgtgggctggaacaaattcctcggctcagagaccaacactgggcctatt
ctggtggggacagcccaggggcagatctatgaggctgaaatctctgtcagcgagggaagc
ctcttcagcactaatcccgaccagtacttccgacaggtctacactctggaggaggaatcg
ggaccggccccggtctgctgcttggagattgaacgagggctagaagggaaattttttatt
atggccaccactcgaaagagactattccagtttgttggcaaagtacctgaagggactgag
cagcaaggcttcagctccatctttgctatgcatgctgaccacctgcccagcttccgggag
tttccggccaacttgggcttcagtgagatagccttttacaccccgaaactgcgctccaat
ccccgctcctttgcctggatgatggggaatggtgttttgtatggtaccttggattacagc
cgacctgattcgattctgagcgatgaacgagtctgggtttacccttcagatattgacata
actgtgaacaagccaatatccattgtgcttactcagttccacttcctcttgctgctgcct
gaccgggtgaaggctgtgtgcactctgaatgggcaggttgttttccaagacctgttcctg
gagaagtttggcttgctgacacgcatgatcaaagatcccatggtccagcagatatggatc
cacactgagaaagtagtgttccgctaccacgtccagcgggagtctagagatgtgtggaag
atgtatatgaacatgaacaaatttgatttagccaaagagtattgtaaagaccgtccagag
tgcctagatattgtgctggcaaaggaggcagagcactgcttccagaacaagaggtatcta
gacagtgccaaatgttacgcgctgacccagaactactttgaagaaattgctcttaagttc
attgaagccaagcaagaagaggccctgatggagtttctgcttaagaagctaagtaaccta
aagccttctgagaagacacagaccacgttgctgaccacgtggttaacggagctgtacctg
aactggctaggtgtactggaaggagatccctcgcagcgaaacctctacctggatacacgg
gagaagttccgcaccttcctgagcagccccaagaacaaagactgtctgtttaataaccgg
gcctctatctatgagctgttggcaagccacggggataccgaacacatggtctactttgca
gtcatcatgcaggactacgagcgtgtagtagctcatcactgccagcacgatgagtatgac
gaagctctaaatgtgctgtccaggcacagagatgagaagctgttctacaagttctctcca
gtccttatccagcatattcctaagaaggtagttgatgcttggatttctatgggttctaga
ctggatgccaggaacctcattccagcccttgttaactatagccagagtgccagcacacag
cagatcaatgaggccattaggtatatggagttctgtgtctatcagttggaggagacccag
gaagccattcacaactacctgttgtctctctacgctttgtgtcggccggactcgttgctg
tcatacctggagcaggcaggaaccaacccaaaccggatccactatgacctgaagtatgcc
ttgcggctgtgcgcggagcacggccaccaccacgcctgcgtccacatttacaaagtgatg
gaactgtatgaggaggctgtggatctcgccttgcaggtggatgttgatcttgcaaagtcc
tgtgcagatctccctgaagatgacgaggagctgcggaagaagctgtggttgaagattgct
cgccatgttgttcaggaagagaaggatgtgaagaaggcaatggcctgcctctccagctgt
gccctgctgaagatcgaagacatcctccccttctttccagacttcgtcactattgaccat
ttcaaggaggcaatctgtaactccctggaggactacaacaaacacattgaggagctgaaa
agggagatggaggaagccacgcagagtgccaagagaatccgagaggacatccaggagatg
agaaataagtatggctctgtggagcctcaggagaaatgtgctgcttgcgattttccgctt
ctaaaccgccctttttaccttttcctctgtgggcacatgtttcactatgactgcctcctc
caagcagttttcccaaacctccctgcctataagcaggcaaaacttgaagatcttcagaag
aagctggcagttaccagtcagccttccaagagccaccaccgtcccaaggacgcggatacc
attagcttggggaaggggcagcagagccgggaacagctcaaagctgacattgatgacatt
gtggcagccgagtgtgtgtactgtggtgagctgatgatccggtccattgacaaacctttt
attgaccctcagaaatacgaagaggagatgcagagctggctgtaa
DBGET
integrated database retrieval system
