Pogoniulus pusillus (red-fronted tinkerbird): 135176714
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Entry
135176714 CDS
T10504
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppus03037
]
135176714 (NPHP1)
Cilium and associated proteins [BR:
ppus03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
135176714 (NPHP1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
135176714
NCBI-ProteinID:
XP_064002028
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All DBs
Position
7:13604174..13622571
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AA seq
672 aa
AA seq
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MSVRRARGPLQRVQRRSRELQAQLEALRAESAALPPEQRKGLFQRCIQLKKLVDENTNAL
HGLKKADEPAPVGNYNQRKEEEEKLLLKLSQQLQRLILVLDQDSMTTNYTVDEEHQRDGK
NEEEDESEDEESSEEDSEEADDEDKQLDDPNVKECITVGNFSAQQEGDLTFTKGEVLLIH
DKKADGWWVAENSKGLRGLVPRTYLAVHNEDGGSQEEGEEHVEVEDETADRTETKKRTDS
HWSAVRKAIVENDTVEVLTTMGAVPAGFRLSTLSQLLEGGTQFRASYFLQPELTESQLAF
KDLVWNSENNTIHPRPTRISLIVTLCSCKMIPLPGVSIQVLSRHIRLCLFDGSRVLSNIH
SVRATWQPKNPQTWTFSPRVTGILPSLLDGDCFVRSNSLSSDIGVLFEVGITYIRNSTGE
KGELSCGWAFQKLFTSNGMPVPSKMYELPLSGGTPYERGVEVDPSISRRAGSGVFHQFMT
LRKQPVLAVKLRSLSVQSKDILNLLPETLVGSMCYIHLLIFYRQLLGDALLKDRISMQST
DLICNPVLATFPQLVDQPDLMDALRSAWADRERTLMRSEKRDQEFLKSLFVLVYHDSVFP
LLQSTFLPKYKWADEECEASRWKVIADFLKKSQENDGALQYLLSSENTHKAFDISELTYD
FLGEVRTDSPGV
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgcggcgggcgcggggcccactgcagcgggtgcagcggcggagccgggagctg
caggcgcagctggaggcgctgcgagcggagagtgcggccctgccccccgagcagcggaag
ggcctttttcagagatgtatacagctgaagaagctggtggatgaaaatacaaatgctctt
catggtttgaaaaaagctgatgagcctgcacctgtagggaattacaatcagaggaaagaa
gaagaagaaaaactcttactgaaactctctcagcagctgcaaaggcttatactggtcttg
gatcaggatagcatgactacaaattacacagtggatgaggaacatcagagagatggcaaa
aatgaagaagaggatgagagtgaagatgaagaaagtagtgaggaggacagtgaagaagca
gatgatgaggataaacagttggatgacccaaatgttaaagaatgtatcacagttggaaac
ttcagcgcacagcaggaaggggatctcacatttacaaaaggtgaagtcctgcttatacat
gacaagaaggcagatggctggtgggtagctgaaaactcaaaaggtttgagaggcctcgtt
cctagaacctatcttgcggtccataatgaagatgggggaagccaagaggaaggtgaagaa
cacgtagaagtggaagatgagacagcagacagaactgaaactaaaaaaagaactgattct
cactggagtgctgtaagaaaagctattgtggagaatgacacggtagaggtactgaccacc
atgggagctgttcctgctggattccgcctatccacactttcccagctcttagaaggaggc
actcagtttcgagcaagttactttttgcagcctgaacttactgaatcacagctggctttc
aaagacttggtgtggaactctgaaaacaacactattcatcctagaccaactcgaatatcc
ctgatcgtaacactctgtagctgtaaaatgattccactcccaggagtcagtattcaggtt
ctcagtagacacattcgactctgtctctttgatggcagtcgggtgctgagtaacattcac
tcagtgagagctacatggcaacctaaaaatcctcaaacatggaccttttctccaagggta
acaggcattttacccagcttgcttgatggtgactgtttcgtcaggtccaactctctgtct
tcagatattggtgtattatttgaagtcggcatcacctatattcgcaactcaacaggtgaa
aaaggagagctaagctgtggctgggcatttcagaagctatttacttcaaatggaatgcct
gttccttccaagatgtatgagctgcctttaagtggtggtactccctatgagagaggagtt
gaggttgacccgtcaatatcaagaagagcaggcagtggtgtttttcatcagtttatgaca
ctcaggaaacagcccgtgcttgcagtgaagctgaggtcattaagtgtgcagtcaaaagac
atcctgaatttgctaccagaaacattagttggcagtatgtgctatatccacctcttaata
ttttatcgacagctgcttggtgatgctctcctgaaagacaggataagcatgcaaagcaca
gatttaatctgtaatcctgttttagcaactttccctcaactcgtggatcagccagacctg
atggatgcacttcggagtgcttgggcagatagagaaagaacattgatgagatctgaaaag
agagatcaagaatttctgaagtctctgtttgtcctggtgtaccatgactctgtcttccct
ctcctccagtccacttttctccccaagtacaagtgggctgatgaagaatgtgaagcatct
cgctggaaggtgattgccgacttcttgaaaaagagccaagaaaatgatggtgcactccaa
tatctgctgtcatcagaaaacactcacaaagcctttgatatctcagagctgacttacgat
ttcttaggagaagtgaggacagacagtcctggagtatga
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