Pogoniulus pusillus (red-fronted tinkerbird): 135176883
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Entry
135176883 CDS
T10504
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
KO
K11274
chromosome transmission fidelity protein 4
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppus03036
]
135176883 (WDHD1)
Chromosome and associated proteins [BR:
ppus03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
135176883 (WDHD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
Ctf4_C
HMG_WDHD1
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_EML
HMG_box
Beta-prop_Vps41
Beta-prop_TEP1_2nd
DSE1_N
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
eIF2A
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Tricorn_2nd
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Beta-prop_SCAP
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
135176883
NCBI-ProteinID:
XP_064002429
LinkDB
All DBs
Position
1:complement(1547662..1604039)
Genome browser
AA seq
1139 aa
AA seq
DB search
MPSAQKPMRYGHTEGHTDVCFDDAGSCIVTCGSDGDVRIWENLDDDDPKSIDVGEKAYSC
ALKNGRLITAISNNTVQVHTFPEGAPDGILTRFTTNANHVIFNGDGTKIAAGSSDFLIKV
VEVSDSSKQKTFRGHDAPVLSLSFDPQDIYLASSSCDGSVRVWKIADQTCTTSWPLLQKC
NDVINAKSICRLGWQPGNGKLLAIPVDQVVKLYRRETWDSQFDLSDAFITQSLNVVAWSP
SGQYLAAGSINGSIVVWNVETQGCIERMKHEKNYSVCGLAWHPKYNHIAYTDTEGNLGLL
EHIGDGKKADDKVASTVTKDYNDLFDGEDDDYLNGDIEPQSSPKPGADEDDDDVMPASAH
LRRAIVDDDDNSLDIGMIKANSSLLEKEDDDDDQPGGFPALPPTSTQQPFYDGPMPTPKQ
KPFQSGSTPAHLMHRFMVWNSVGIIRCYNDEQDNAIDVEFHDTSVHHATHLPNSLNHTMA
DLSAEAILLACESTEELASKLHCIHFGSWDANKEWTVDMPKDEDIEAICLGQGWAACATS
ALLVRVLTVGGIQKEIFSLPGPVVSMAGHGEQLMVVYHRGTGFDGDQCLGVQLMELGEKK
RQILHGEPLSLTRKSYLVWLGFSAEGTPCYVDSEGLVRMLNRGLGNTWIPVCNMREHCKA
KSDHYWVVGIHENPQQLRCIPCKGARFPPTLPRPAVAILSFKLPYCQVATEKGQMEEQYW
RSVVFHNHTDYLSRNGYELDGTAKSQALKEQQELLMKLFALSCKLEREFRCMELAELMTH
SVVNLAIKYASRSRRLNLAQRLSEMAVEKARELATAEEDEEEEEEDFPKPSRAGFPSECG
NHFLPDGFLPFSYSNSAREWSRQPVRSVQQDQEMEGAEESDACEEEEETPEVHKQRPNPF
SRSATSAEVPAPKSIVVITSSSQGRVNPFKVSSNKKDPVVPSTNVLDTMTKQTKKTSLPS
NRATNKQNPPVIKPLIPKPKSKQALAASFFQPRTPNSSEKTVEEREEKAGNESQEVKVPA
QGNTENRRPRTGFQMWLEENRANILTDNPDLDEAEVIKEGMSRFRVLSAEERMAWTEKAK
GGAGNELAEDKKRKRPTADEDEEEKKEEQESEDSNLPKKSKPLEQSTNVRLSAFAFKQS
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagcacaaaagccgatgcggtacggccacacggaaggtcacacggatgtctgc
ttcgatgacgccgggagctgcattgtaacttgtggcagtgatggagatgttaggatttgg
gaaaacctggatgatgacgatccaaagtccattgatgtgggagaaaaggcctattcatgt
gctctgaagaatgggagactgatcacagcaatatcaaacaacactgtccaggtgcataca
ttccctgaaggagctccagatgggatcctcactcgtttcaccacgaatgcaaaccatgtc
atctttaatggtgatggcaccaaaattgctgctggatcaagtgactttctgatcaaagtg
gtggaggtgtctgacagcagcaagcagaaaacattccgaggacacgacgctcctgtttta
agcctgtcttttgacccccaggatatttacttggcatcgtcgagctgcgatggatctgtc
agggtatggaaaattgcagatcagacatgcacaacaagctggccactgctgcagaaatgt
aatgatgtgataaatgctaaatcaatatgcaggcttggctggcaacctggcaatgggaag
ttgctggcaatccctgtagatcaggttgttaaactctacagaagagaaacctgggacagt
cagtttgatctgtcagatgcattcatcacacagtccttgaatgttgtggcctggtctcct
tctgggcagtatctggcagctggaagtataaatgggagtatagtggtgtggaatgtggaa
acccaggggtgcatagagaggatgaagcatgagaaaaattactcagtttgtggactggca
tggcaccctaaatacaaccacattgcttacacagacactgaaggaaatctggggctgttg
gaacatattggtgatggaaagaaagcagatgacaaggttgccagtacagtgacaaaggac
tacaatgatctctttgatggagaagatgatgactatttaaatggagatattgaaccacag
tcttccccaaagcctggagctgatgaagatgatgatgatgtcatgccagcttcagcccat
ctaagaagggcaatagttgatgatgatgacaactcactagatattgggatgataaaagct
aattccagtctcctggaaaaggaagatgatgatgatgatcagcctggtggctttccagct
ttaccaccaacatccacacagcaacctttctatgatgggccaatgccaacccccaagcaa
aagccattccagtctggctccactcctgcccatctcatgcatcgtttcatggtgtggaat
tctgttggcatcattcggtgttacaatgacgaacaggacaatgccatcgacgtggaattt
cacgatacctccgtacaccatgcaacacacctgcccaactccctgaatcacacaatggct
gacctctctgctgaagctatcttactggcctgtgagagcacagaagagcttgcaagcaag
ctgcactgcattcattttggctcgtgggatgcaaacaaggagtggacagtggatatgcca
aaggatgaagacatcgaggccatctgcctagggcaaggctgggctgcttgtgccactagt
gctttgctggttcgtgtgctcacagttggaggaattcagaaagagatcttcagccttcca
ggcccagtggtgtctatggcaggacatggagagcagttgatggttgtttatcacagagga
actggctttgatggggaccagtgccttggagtccagctgatggaactaggagaaaagaaa
agacagattttgcacggagagcctctttccctgacaaggaaatcctacttggtatggctt
ggattctctgcagaaggtaccccctgttacgtggattccgaaggactcgtccggatgctg
aaccgagggctggggaacacttggattccagtctgtaacatgagagagcactgcaaagca
aaatcagatcattactgggtggttggcatccatgagaatccccagcagctcaggtgtatt
ccttgtaaaggagctcgattccctcctacgctgccccggcctgctgtagcaatactatcc
ttcaaacttccttactgtcaagttgccacagaaaagggacagatggaggagcagtactgg
cgttctgttgtgtttcacaaccacacagattacttatcaaggaatggctatgagctggat
ggaactgctaaaagtcaggcactgaaggaacagcaggaactgctaatgaagctttttgct
ctgtcctgcaagctggagcgtgaattccgctgcatggagcttgctgagctcatgactcac
agcgttgtgaatttagcgatcaagtacgcctctcgctcccgaaggctgaacttagctcag
agactcagtgaaatggctgtagaaaaagcaagagagttggcaacagcagaggaagatgaa
gaggaggaggaggaggatttcccaaagccctcacgtgctggctttccctctgaatgtggc
aaccacttccttcctgatggattccttccatttagttacagcaactctgccagggagtgg
agtcggcagccagtcagaagtgttcagcaggaccaagaaatggaaggtgctgaggagagt
gatgcctgtgaggaggaagaagaaacaccagaagtgcataaacagaggccaaatcctttc
tccaggagtgccacctcagcagaggtccctgctcctaagtccatagttgtgattacatca
agcagccaaggacgagtgaatccctttaaggtgtcatctaacaaaaaggacccagtggtc
ccctcaacaaatgttctagacactatgaccaaacagacaaagaaaacttctttgcctagc
aatcgagctacaaacaagcagaaccctccagttataaagcctctgattcccaaacccaag
tccaagcaggctttagcagcctctttcttccagcctcgtacacctaactctagtgaaaaa
acagtagaagaaagagaagaaaaagcaggaaatgagtcccaggaggtcaaagtccctgca
caggggaacactgaaaacagaagaccacgaacaggattccagatgtggctagaagagaac
agagcaaacattttgacagataatcctgatctggatgaagcagaagtaataaaagaaggc
atgagtcggtttagagtgctgtcagctgaagaaagaatggcatggactgagaaagccaaa
ggaggagcaggaaatgagttagcagaagataaaaagcggaagcgtcccacagctgacgag
gatgaagaggaaaagaaagaggagcaagaatcagaggactcaaatctacccaaaaaatca
aagcctttagagcagtctacaaacgtcagactgtcagcttttgccttcaagcaaagctaa
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