Pogoniulus pusillus (red-fronted tinkerbird): 135177420
Help
Entry
135177420 CDS
T10504
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppus03016
]
135177420 (TRMT13)
Enzymes [BR:
ppus01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
135177420 (TRMT13)
Transfer RNA biogenesis [BR:
ppus03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
135177420 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
COG4_m
Motif
Other DBs
NCBI-GeneID:
135177420
NCBI-ProteinID:
XP_064003431
LinkDB
All DBs
Position
8:16273256..16281217
Genome browser
AA seq
473 aa
AA seq
DB search
MAAPQPEVGRGSPLPGRCAYFVQRKNRFCKMIPAPGRRFCGEHGQQEKENDRKRIPCPLD
PKHTVYEDQLQKHLKKCNSREKPKPVYFVQDINAGLKDVADIVEEQVPISFLSKEELENL
IAKLQKASNGLELGLKEQVLSHQALQEALNDPKNGESAVKHLKQQASILGNMEKLHLLGP
GRCFVEFGAGRGKLSYWVDVALQNVENVQFLLVERATTRFKVDGKHKRKDSVFERLQVDI
QHLCLKKVPILEKKKLPVVGIGKHLCGAATDLALRCLVESYTACCHGANEEPAPKRSRSD
KAEVASNNSSDKKCSKDDCKPIAGIVIALCCHHKCDWTHYVGREFFKSVGLGPVEFHYFQ
RMSSWATCGMRETTTKASTSEESEDQTNDPEEHDQTFSKTESGSDTLQGILTVEERKQIG
YLCKLLIDHGRVEYLQQRGYKAALQYYTESAVSLENVLLTAVPGSSLKPEPAT
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgcagccggaggtgggccgcggctccccgctgccagggcgatgtgcctac
tttgtgcagaggaagaaccgcttctgcaagatgatcccggctccggggaggcgcttctgt
ggagagcacgggcagcaggagaaagaaaacgacagaaaaagaattccatgccctcttgat
cccaaacacactgtgtatgaagaccaactgcaaaagcatttaaaaaagtgtaattcaaga
gagaagccaaaaccagtctactttgttcaagatatcaatgcaggtttaaaagatgtagca
gatatagtagaagaacaagtacctatctcttttctgtccaaggaggagctggaaaactta
attgccaagttgcaaaaagcaagtaatggcttggaactcggcctgaaggaacaagtactg
tcccaccaggctttacaagaagccttaaatgacccgaagaacggagaatccgctgtcaaa
catttgaaacaacaggcttctattttaggtaacatggaaaaattacatttactgggtcca
ggaagatgctttgttgaatttggagctgggcgagggaagttgtcttactgggtggatgtt
gccttacagaatgttgaaaacgttcagtttttgcttgtggaaagggcaacaacaagattc
aaggtagatggaaaacataaaaggaaagattctgtgtttgaaaggcttcaagttgacatt
cagcatttatgtttaaaaaaggtgcctattctggagaagaaaaagctaccagtggtagga
attgggaagcatttgtgtggtgctgcaacagatcttgctttgagatgcttggttgaaagt
tacacagcttgctgccatggagcaaatgaagagcccgcacccaaacgctctaggagtgat
aaggcagaggtggcttctaacaattcttctgataagaaatgcagtaaagacgactgtaag
cctatagccggaatagttattgcactgtgttgccatcacaagtgtgactggacacattat
gtaggcagagagttctttaaatcagtaggacttgggccagtagaatttcattattttcag
agaatgagtagctgggccacttgtggcatgcgagaaaccacaaccaaagcctctacaagt
gaagaaagtgaagatcaaactaatgacccagaagagcatgaccaaacattcagcaagaca
gagagtggttctgatactttacaagggatcctcactgtagaggaacgaaagcaaataggc
tacctctgcaaactgctgattgaccatgggcgggttgaatatttacaacaacgaggatac
aaggctgcactacagtattatacagagtctgctgtgtctctagagaacgtcctcttgaca
gctgtcccaggttcatctttgaaaccagagccagctacatga
DBGET
integrated database retrieval system
