Pogoniulus pusillus (red-fronted tinkerbird): 135177433
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Entry
135177433 CDS
T10504
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135177433 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppus03041
]
135177433 (PRPF38A)
Spliceosome [BR:
ppus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
135177433 (PRPF38A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
GIP4
Motif
Other DBs
NCBI-GeneID:
135177433
NCBI-ProteinID:
XP_064003460
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All DBs
Position
8:16873827..16877867
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AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHEERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERAPSPDHRRRGYRDLDKPRRSPAVRYRRSRSRSPR
RRSRSPKRRSPSPRRDRHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccggacggtgaaggatgcgcacagcatccacggcaccaacccccagtacctg
gtggagaagatcatccgcacccgcatctacgagtccaagtactggaaggaggagtgcttc
ggcctgacagccgagctggtggtggacaaggccatggagcttaagtatgtaggaggcgtc
tatggagggaacattaagccaacccccttcttgtgcctgacgctgaagatgctgcagatc
cagccggaaaaggacatcattgtggagttcataaagaacgaggacttcaagtacgtccgg
atgctgggtgcattgtacatgaggctgacaggcacagccatcgactgctacaagtacctt
gagccactgtacaacgactaccgaaagatcaaaagccagaacagaaatggggaatttgaa
ctgatgcacgtggatgaatttattgatgagctcctccatgaggaacgtgtgtgtgatatc
attctgcctcgactgcagaaacgatatgtcctggaggaagccgaacagctcgagccccgt
gttagtgccttggaagaggacatggatgatgtagaatctagtgaagaggaggaagaagaa
gatgagaagctggaacgagcaccctctcccgaccaccgcagaagagggtaccgtgacctt
gacaaacctcgccggtccccagctgtgcggtaccggcggagccgcagcaggtctccgagg
aggcgaagccgctctccaaagaggagaagcccatccccacgccgtgacaggcaccgaagc
aaaagccccaggcgacatcgaagcaggtcccgggagaggcgccacaggtcacgatccaaa
tctccagggcatcaccgcagccacagacacagaagtcattccaagtcacctgaaagatct
aagaagagccacaagaagagccgtcgagggaatgagtaa
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