Pogoniulus pusillus (red-fronted tinkerbird): 135177796
Help
Entry
135177796 CDS
T10504
Symbol
ABCA4
Name
(RefSeq) LOW QUALITY PROTEIN: retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135177796 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppus02000
]
135177796 (ABCA4)
Transporters [BR:
ppus02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
135177796 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
135177796
NCBI-ProteinID:
XP_064004324
LinkDB
All DBs
Position
8:13466138..13576855
Genome browser
AA seq
2276 aa
AA seq
DB search
MSFFRQVRLLLWKNWILRRRQKLRFLVELVWPLSLFLALVWLRKVNPLYRQHECHFPNKA
MPSAGVLPWLHGIFCNVNNPCFQSPTHGEGPGVVSNYNNSILARVYKDAQELLLGAPEIR
DLGRIWEELIVMTQFMETMRTNPERIEGRGIRILDILKDGETLTSFLLEDVGLPDVVVFQ
LINAQVRPEQFAYGVPDLTLKDIACSQTLLDRFIIFSSRRGLPSVHKVMCTLSQESLQRV
EDALYANVDFFKLFQLLPTVLDRNSPGADLRTWGRVLANVSQAVQKLVGKPSVQELLTVL
QPFVQEGRPESLDHLVSSLSGLFCGYPEGGGSRVLSFNWYEDNNYKAFLGIDSTRKKSTY
LYDNTTTPFCNALIQSLESNPFTKIAWSAAKPLLMGKILFAPDSPAVQQILKNANSTFEE
LERLRVLTKAWEELGPQLWYFFQNGLQMNMIRDSLKHPTVRNFLNSQLRAEGFTAEHIIN
FLHNGSPGSREEGMADFDWRNIFRAADQALRLLSQYLECLNLDKFEGYLDETQLTHQALH
LVEENKFWAGVVFPDIEPTASSLPPHVKYKIRMDIDAVEKTNKIKDRYWDPGPRADPVDD
LRYIWGGFAYLQDMIEHGIIKTQTNTEVPLGVYLQQMPYPCFVDDVFMITLNRSFPIFMV
LAWVYSVSMIVKSIVLEKEMHLKEAMKNRGVANGVIWCAWLLDSFVMMAVSTFLLTALLM
CGEVLQYSSPLLLFLFLLTFTTATIMQCFLFSTFFSKANLAAACSGVIYFTLYLPHIVCF
VWQERMTVKLKILLSLISQVAFGFGTEYLSRYEEQGLGLQWGNIRTSPLEGDEYSFLFSI
KMMLFDAFLYGILSWYLDNVFPGDYGLPQPWYFPVQKSYWLGXQGCSSRELKAIDKDEIN
SKERKQPEHCDGLANTCFEPEPTGLIPGVCVQNLVKIFANRPKPAVDGMNITFYEGQITA
FLGQNGAGKTTTMSILTGLFPPTSGTILIDGLDIQTHMDSVQHRLGMCPQHNILFNQLTV
AEHILFYSQLKGRSRDEADQELETMLEDTGLTHKRNEEAHNLSGGMQRKLSVAIAFVGEA
KVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIFSTHHMDEADILGDRVAIISQGKLFC
SGSPVFLKNCFGSGFYLTLVRKMKNTGTGRATSLCSCGSQCSCSCSSCAQRDKEEAPSLE
LDGDLNELEEVIHHHIPEAKLIKSIGQELIYLLPNKHFKQRSYASLFRELEETLDDLGLS
SFGVSDTPLEEVFLKVTAEADPGIQKAGHAQENGSTLCETAAENQPAEQNTLRTTDTSRM
PVGLPGDENEGKGSRQYKGLELVHQQIKALLIKRFHHASRSYKDFLAQIVLPASFVLLSL
IITVVIPPFGEYPALTLHPWIYGQQFTFFSNERPGNERMVSLTDALLNKPGFGNRCMKNQ
PLLGYPCNNVTTAWSTPAVHPDLSSFLLSHKWSPEKPSPLCKCSSQKKLTMLPECPAGAG
GLPPPQRVQQSTEILQDLTHRNISDFLVKTYPSLIKGSLKSKYWVNEQRYGGISIGGRLP
VLHVSGDQVVNFLSDLGRMMNVTGGQNSLTAAKEMSNFLKYMETEDNIKVWFNNKGWHAI
VSFLNVANNAILRANLRTGQAPEEYGITAVNHPLNLTKEQLSEVTVLTTSVDAVVAICVI
FAMSFIPASFVLYLIQERVTKAKHLQLVSGVSPAIYWLTNFLWDIVNYALSVGMVVAIFI
GFNKKAYTSPTNLPVLVALLLLYGWAVIPMMYPAASFFSVPSTAYVVLSCINLFVGINST
AITFILELFENNPSLLKFNKTLKNVLIAFPHFCLGRGLIDLAMNQAVTEVYARFGEEHVS
NPFQWDFVGKNLVAMAVQGVAYFILNLFMQHRLFSMRWFAGPAMPPIIDEDEDVAEERKR
IMSGGNKTDILELQDLTKIYAGRHKPAVDRLCLGIRPGECFGLLGVNGAGKTTTFKMLTG
DTDVTSGDAVVAGNSILTHISNVHQNMGYCPQFDAIDDLLTGREHLHLYARLKGVPAEEI
KRVAEWGIQKLGLPMYADHLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQSRR
LLWDSIVSVLRDRRAVVLTSHSMEECEALCTRLAIMVKGTFKCLGTIQQLKYKFGDGYIV
TLKIKAPKSGLPPDPTPAEQFIRVNFPGSLQRERHYNMLQYQICSSSLAKIFRLIISNKE
NLHIEEYSVSQTTLDQVFVNFAKQQMEDEDIPLHPRAAGASQETKVSPASCQQVVA
NT seq
6831 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcttcaggcaagtcagacttctgctttggaagaactggatcctccggagaaga
caaaagcttcgcttcctggtggagcttgtatggcctctgtcgttgtttcttgccctcgtc
tggctgaggaaagttaatccactgtaccgccaacatgaatgtcactttcccaacaaagca
atgccatctgcaggggtgctgccatggttgcatggcatcttctgcaatgtgaacaaccct
tgtttccagagcccaacccatggagaaggtccaggtgttgtgtccaactacaacaattct
atccttgcaagggtatataaagatgcccaggagctcttactgggagcccctgaaatccgt
gatcttggcaggatctgggaagaactgatcgttatgactcagtttatggaaacaatgaga
actaaccctgaaagaattgaaggaagaggaatacgaattctagacattttgaaagatggg
gagacccttacttccttcttgctggaagatgttggcctcccagatgttgtagttttccag
cttattaatgcacaagtgcgtcctgaacagtttgcctatggtgttcctgacttgactctg
aaggatattgcttgcagtcagacgctcctggaccgcttcattatcttcagcagcagacga
ggtctcccttctgtgcacaaggtcatgtgtaccttatcccaggaaagtctacagagagta
gaagatgccttgtatgcaaatgttgatttctttaagctatttcagctgcttcccacagtg
ttggacagaaactcaccgggtgctgacttgagaacctggggcagggttctggctaatgtc
tctcaagcagtgcaaaaactcgtcgggaagccaagcgtgcaggagctcttgacagttctg
cagccatttgtgcaagagggaaggccagaatccttggaccatttggtgagctccctgtct
ggtcttttctgtggctacccagaaggaggtggatctagagtgctctctttcaactggtat
gaagataataactacaaagctttcctgggaattgattcaacaagaaagaaatccacttat
ctttatgataacacaaccacacccttttgtaatgcattgatccagagcttggagtcaaac
cctttcaccaaaattgcctggagtgctgcgaagcccctgctgatgggaaaaattctcttt
gctcccgattcacctgctgtacagcaaatccttaaaaatgctaactctacttttgaggaa
cttgaacgcctcagagtgttgaccaaagcttgggaagaattaggacctcagctgtggtac
ttctttcaaaatggcctgcaaatgaatatgatccgtgactctctgaagcatcctacagtg
aggaacttcttgaacagccagctacgtgctgaaggcttcactgctgaacacattatcaac
tttctccacaatgggtctccaggaagccgggaggagggaatggcagactttgattggcgg
aatatcttcagagctgcagaccaagcactgcgtctactcagtcagtacctggagtgtttg
aacttggataaatttgaaggttatcttgatgaaactcaactgacccatcaagcccttcat
ctggtggaggaaaacaaattttgggctggtgtggtttttccagacatagagcctacagcc
agcagccttccaccacatgtgaaatacaagatccggatggacatagatgcagtggagaaa
acaaacaaaatcaaagacaggtactgggatcctggtccaagagctgatcctgtggatgat
ttgcgttacatctggggaggctttgcatatcttcaagacatgattgagcatgggattata
aagactcagaccaacactgaagttccattgggagtttatctgcagcaaatgccatatcca
tgttttgtggatgatgtcttcatgatcactttaaaccgctcctttcccatcttcatggtc
ctagcctgggtatattcagtctccatgattgtgaagagcatagtgctggagaaggaaatg
catctgaaagaggccatgaagaacaggggtgtagccaatggggtgatctggtgtgcttgg
ctcctagacagttttgtcatgatggctgtgagcaccttcctcctgacagcactgctcatg
tgtggagaagtcctacagtacagcagtccactgctgctctttctgttcttactgacgttc
accacggccaccataatgcaatgtttcttgttcagcaccttcttttccaaagcaaatctg
gcagctgcctgcagtggagtcatctacttcacgttgtacctgccccacattgtctgcttt
gtctggcaagagcgcatgactgtcaagctgaagatcctactgagtctgatttctcaagta
gcttttggctttggtaccgagtatttgtcacgctatgaagaacaaggtcttggcctacag
tggggtaacatcagaactagtccattggaaggagatgaatatagttttcttttttccatt
aaaatgatgctttttgatgcttttctctatggaatactttcttggtatcttgacaacgtt
ttcccaggggactatgggctgccacagccttggtacttccctgtgcagaaatcctactgg
cttggctgacagggctgtagttcccgagagctaaaagcaattgacaaagatgaaattaat
agtaaggagagaaagcaacctgaacattgtgatggtttggcaaacacctgctttgagcct
gagccaacaggactgattccaggagtatgtgttcagaacctagtgaagatttttgcaaac
agacccaagccagcagtagatgggatgaatattactttttatgagggccagatcacagcc
ttccttggtcagaatggagcaggaaagacaactaccatgtcaatactgacaggccttttt
ccacccacttctggaacgatactgattgatggcctggatattcagactcatatggattct
gttcaacacagactggggatgtgccctcagcacaacatcttattcaaccagcttactgta
gcagagcacatcttgttttactctcaactgaaagggagatccagagatgaagctgaccaa
gagctggaaacaatgctagaagacacaggcctcacacataaaagaaatgaagaggctcac
aatttgtcaggtggaatgcaaaggaagctctctgttgccattgcttttgtgggtgaagcc
aaagtagtagtgttggatgagcccacttctggagttgatccatactccaggcgatcgatc
tgggatcttctgctaaagtatcgctcaggcagaaccatcatcttttcaactcatcacatg
gacgaggcagacatccttggagacagagtagccatcatatcccaagggaaactcttctgc
tcaggctctcctgtatttctgaagaactgttttgggtctggcttctatctcactcttgtt
cgcaagatgaagaacaccggaactggaagggccacatcactttgtagctgtggatcccag
tgctcctgctcctgctccagctgtgcgcagagggacaaggaagaagctccaagcctggaa
ctggacggagacctgaatgagttagaagaagtaattcatcatcatattccagaagcaaaa
ttaatcaaaagcattggccaggaactcatttaccttttgcccaataaacacttcaaacaa
cgatcttatgcgagtctcttcagagaactggaggaaacattggacgacctggggctcagc
agttttggagtttcagacacaccacttgaagaggttttcctaaaagtaacagcagaagct
gaccctgggattcaaaaagcaggacacgctcaagaaaatggttctactctttgcgaaact
gctgctgagaaccagccagctgaacaaaacacactgagaactactgacacctctcgaatg
ccagtaggtctaccaggagatgaaaatgaaggcaaaggatcccgacagtataaaggtttg
gagcttgtccatcagcagatcaaagcactgctcattaaacggttccaccatgcttctcgt
agctacaaggacttcctagcccagattgttctccctgctagttttgtgttgctgtcttta
ataattacggtcgttattcctccatttggagaatatcctgccttaacattacatccctgg
atctatggacaacagtttactttcttcagcaacgagcgtcctgggaatgagcggatggtc
tccctcactgatgctctcctgaacaaacctggctttggaaaccgttgcatgaagaatcag
cctctgctgggctacccatgcaataatgtgacgactgcctggagcacacctgctgttcat
cctgacttgagcagcttccttctgagccacaagtggagcccggagaagccttcgcctctc
tgcaagtgcagctctcagaagaaactgactatgctgccagaatgcccagcaggggcagga
ggcctcccaccgccacagcgagtgcagcaaagcacagaaattcttcaagatctgacccac
agaaacatttcagattttctggtgaaaacatatcccagcctgataaaagggagcttgaag
agcaaatactgggtcaatgagcaaaggtatggaggaatttctataggaggaaggcttcca
gtccttcatgtttctggagatcaggttgtcaattttttaagtgatcttggccgaatgatg
aatgttacaggaggacaaaattcactgactgctgctaaagaaatgtctaatttccttaaa
tatatggaaactgaagataatattaaggtgtggtttaacaacaaaggctggcatgctata
gttagtttccttaatgtagcaaataatgcaatccttagagctaacctgcgaactggccaa
gctcctgaggaatatgggatcactgctgtaaaccatcctcttaacctcactaaggagcag
ctctctgaagtcactgtactgactacttcagtggatgccgttgttgccatctgtgtcatt
tttgccatgtcctttataccagccagttttgtgttatacctgattcaagagcgtgtgacc
aaagctaagcacctgcagcttgtcagcggtgtgagccctgccatctactggctgactaac
ttcttgtgggacatagtcaattatgcactgagtgttggaatggttgtggctatattcatt
ggattcaacaagaaagcatacacttctccaacaaatcttcctgtgcttgttgccttgctg
cttctatatgggtgggcagtaattcccatgatgtaccctgctgcttctttcttcagcgtc
cccagcactgcgtatgtggtgctgtcttgcattaatctctttgtcgggatcaacagcact
gccattaccttcatcctggagctgtttgagaacaacccgtctttgctgaagtttaacaag
acattgaaaaatgtgttaattgccttcccacatttttgcctgggccgtggactcattgat
ttggccatgaaccaagctgtgactgaagtatatgccagatttggtgaggagcatgtttcc
aacccttttcagtgggactttgttggaaagaacttggttgccatggctgtgcaaggggtt
gcatacttcattctgaatctctttatgcagcaccgtttattctccatgagatggtttgct
gggcctgccatgccacctattattgacgaagatgaggatgttgcagaagaaagaaaaaga
attatgagtggtgggaacaaaacagatatcttggaattgcaggatctgaccaagatctat
gcaggtaggcacaagcctgcagtggacagactgtgtcttggcatccgtcccggagagtgc
tttggtcttttgggagtgaacggcgctggcaaaacaacaacattcaaaatgctgactgga
gatactgatgtgacatctggggatgctgtagtggctggcaatagcatattgacccacatt
tccaacgtccaccaaaacatgggctactgccctcagtttgatgctattgatgacctgctc
acaggaagagaacatctccacttgtatgcacgcctgaagggagttccggcagaggaaatc
aagagggttgctgaatggggcatccagaagctgggccttcctatgtatgcagaccacctg
gctggtacctacagtggtggcaacaagcgcaagctctccactgctattgcattgattggc
tgcccaccactcgtcttgctagatgagccaactactgggatggacccgcagtcccggcgc
cttctgtgggactctattgtcagcgtgctcagagacagacgagctgtggttctaacctca
cacagtatggaagaatgtgaagccctctgtacccgtttagccatcatggtaaagggtacc
ttcaaatgcctgggcacaattcagcagctaaagtacaagtttggagatggctacattgtc
actctgaaaatcaaagctccaaagtcagggctgcctccagatcctactcctgctgagcaa
ttcatacgtgtgaactttccagggagtttacagagagagagacactacaacatgctgcag
tatcagatttgttcctcatctctggctaagatttttcggttaataatctccaataaggaa
aatttgcatatcgaagaatattctgtgtctcaaacaactttagatcaggtttttgtgaac
tttgctaaacagcagatggaggatgaggacattcctttgcatccccgtgcagctggagcc
agccaagaaacaaaggtgtcccctgcttcatgtcagcaggtggttgcgtag
DBGET
integrated database retrieval system
