Pogoniulus pusillus (red-fronted tinkerbird): 135177958
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Entry
135177958 CDS
T10504
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135177958 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppus04990
]
135177958 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
ppus04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
135177958 (PDLIM5)
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
Motif
Other DBs
NCBI-GeneID:
135177958
NCBI-ProteinID:
XP_064004412
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Position
9:3053139..3222363
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AA seq
827 aa
AA seq
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MSNYSVSLVGPAPWGFRLQGGKDFNMPLSISRLNDGGKAAQAKVGIGDVVLTIDGISTEG
MTHLEAQNKIKACTGNLNMTLQRVTSITKPDLIHVPKGEPTEVVKPVPIASAVAPKVTAV
ASVAYNTTPRPFGAVTSSKVTSIPSPSSAFTPAQAAPFAAPGLHVNAKPNAEQPAAAPSA
AKPAVNVLRQPAAAHAAAPSATAAAPSATAAQGAQELAEGPRRGGRENQGESKQQNGKNP
PKRPPRKHIVDTYTEFYHTPTHSDASKKRLIEDTEDWHPRTGTTQSRSFRILAQITGTDH
VEEPEHEAAKKTNVPAGLPNGAGSQEVCIDLNKSSITAKTLEMPPVPEFPPTPLPLTRKV
SAEFPAPDAESFLTADKALPEKCSVATQTSEFPLPAAASTALPLETALRLPPASARHEAS
LPPCESDTSLICQSKSSVSQTSFCASKVLLENPLGSVPGVTPAAPPPVLSPFKQRSKMKS
VAAAAVSAAIAVRARLSEPGVCRSLLDALLITPVSKPPLLALGPSRKSTSSLELGKRKSD
SLEAPQPAAFTASSARSMPAPQENVEARPAPASTASAAALKPAGPPGAAKYSGWQPANQA
APASGWTPSSATPLGTAASSEKLPPAPQPSEQDTLVQRAEHIPAGKRTPMCAHCNQVIRG
PFLLALGKSWHPEEFNCAHCKTSMAYIGFVEEKGALYCEGCYEKFFAPECSRCQRKILGE
VINALKQTWHVSCFVCAACHNPIRNNVFHLEDGDPYCETDYYALFGTMCHGCEFPIEAGD
RFLEALGHTWHDTCFVCSVCSDSLEGQTFFSKKDKPLCKKHAHSLNI
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagcgtgtctttggtcgggccagctccttggggtttccgacttcaagga
ggcaaggatttcaacatgcctctgtctatctcccggcttaacgacggtggcaaagcagcc
caagcaaaggtgggaataggcgatgtggttctcaccatcgatgggataagcacggagggg
atgactcatctagaagcacaaaacaagatcaaggcgtgtacaggcaacctgaacatgact
ctgcaaagagtgacttctataacaaaacctgatcttattcatgtgccaaagggcgaacct
accgaagtagttaagcctgtgcccattgcctctgctgtcgcacccaaagtcactgccgtg
gcaagcgtggcttacaatacgacgccacggccgtttggagctgtaacctcctccaaagtc
acctccatcccatcaccatcctccgccttcaccccagctcaggcggcgccgtttgccgcg
cccggactgcatgttaacgccaagcctaacgctgagcagcctgcggccgccccgagcgct
gctaaacctgcagttaatgtcctacggcagcctgcggccgcgcacgccgcggcccccagc
gccaccgccgcggcccccagcgccaccgctgcccagggcgcccaggagctagccgagggg
ccacgacgaggaggcagagaaaaccagggggagagtaaacagcaaaatgggaaaaaccca
cccaaacgccccccccgaaagcacatcgtggacacctacacggagttctaccacacgccc
acgcacagcgacgccagcaagaagcggctgattgaggacacggaggactggcacccccgc
accggcaccacccagtcccgctccttccgcatcctggcccagatcaccggcaccgaccac
gtggaagaacccgaacatgaagctgcaaagaagacaaatgtacctgcaggtctgcctaat
ggagcaggatcccaggaagtctgtattgatctgaataaaagctccataactgccaagact
ttggagatgccacctgttccagaattcccacctacacctttaccacttacaaggaaagtc
tctgcagagttccctgctccagatgcagaaagctttctgacagctgataaagctcttcct
gagaagtgctctgtggccacacagacctctgagttccccttgcctgctgcagcttccaca
gccctgcctctggaaacagccctcaggctgccacctgcttctgccaggcatgaagcatct
ctgcctccttgtgaatcagatacttccctaatctgtcagtctaaatcatctgtaagccag
acaagcttctgtgctagtaaagtactgctggaaaatcctttgggaagcgtgcctggtgtc
acacctgctgctcctcctcctgttctctctcctttcaagcagagatcaaaaatgaagagt
gtggctgctgctgccgtgtctgctgccatcgctgtccgtgccagactctccgaacctggc
gtctgccgctcgctcttggatgctctgctcatcacacctgtctctaagcctcctctgctg
gcccttgggccctctaggaagtccacaagctctctcgagttaggaaagagaaagagtgat
tccctggaggctccccagcctgctgcttttacagccagctcagcaagaagcatgcctgcc
ccacaagaaaacgtagaggcaagacctgctcctgccagcaccgcgtctgccgcggccctc
aagcctgcaggacccccgggtgctgccaagtactcaggctggcagcctgcaaaccaagca
gctcctgccagcgggtggacaccgagcagtgctacaccgcttggaacagctgcctccagt
gagaaactcccaccagcacctcagcccagtgagcaggacactttggttcagagggcagag
cacattcctgcagggaagagaactcccatgtgtgcacactgcaatcaagtcatcagagga
cccttcttgttggctctgggcaagtcctggcatccagaggagtttaactgtgctcactgc
aaaacctccatggcttacattgggtttgtggaagagaaaggggccctgtactgcgagggc
tgctacgagaagttctttgcccccgagtgctccaggtgccagaggaagatccttggggag
gtcatcaatgctttgaaacaaacctggcacgtttcctgcttcgtctgtgcagcctgtcat
aaccccatccgcaataacgtcttccacttggaagatggagatccctactgtgagacagat
tactacgctctcttcggcactatgtgtcacggctgtgagttccccatcgaagctggagac
aggtttctggaagccctgggccacacctggcacgacacttgcttcgtgtgctcagtctgc
agtgacagtttggagggtcagactttcttctccaagaaggacaagcccctgtgcaagaaa
catgctcactccctcaacatctga
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