Pogoniulus pusillus (red-fronted tinkerbird): 135178074
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Entry
135178074 CDS
T10504
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03020
RNA polymerase
ppus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135178074 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
135178074 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppus03021
]
135178074 (POLR2B)
03400 DNA repair and recombination proteins [BR:
ppus03400
]
135178074 (POLR2B)
Enzymes [BR:
ppus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135178074 (POLR2B)
Transcription machinery [BR:
ppus03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
135178074 (POLR2B)
DNA repair and recombination proteins [BR:
ppus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
135178074 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
135178074
NCBI-ProteinID:
XP_064004649
LinkDB
All DBs
Position
9:complement(14410427..14430756)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcaatatgatgaagatgatgatgaaatcacccccgac
ttgtggcaagaagcctgctggatcgttattagctcctattttgatgaaaagggtttagtc
aggcaacagttggattcttttgatgagtttattcagatgtctgtgcagagaattgttgaa
gatgccccaccaattgatttacaagctgaagcccagcatgccacaggagaagtggaagaa
cctccccgctatctgctgaagtttgaacagatctatctctccaaacctacgcattgggaa
agagatggagcaccatcacctatgatgcctaatgaagccagactgagaaaccttacgtat
tcagcccccttgtatgtggatataaccaaaacagttattaaagaaggggaagatcagtta
caaacacagcatcagaaaactttcataggaaaaattcctattatgttacgttcaacatac
tgcttgttgaatggcttaactgaccgtgacctttgtgaactgaacgaatgcccacttgat
cctggtggctactttatcattaatggatcagaaaaggttctgattgctcaagagaaaatg
gctacaaacacagtgtatgtgtttgcaaagaaagattcgaaatatgcctacacaggagag
tgtagatcttgtctggaaaactcctctcgaccaacgagtacgatatgggttagcatgctg
gccagaggtgggcagggtgcaaagaagagtgctattggtcagcgcatcgtagcaacttta
ccatatatcaagcaagaagtccccatcattattgtctttcgtgcactaggctttgtgtct
gacagggacattttggaacacattatatatgattttgaagatccagaaatgatggaaatg
gttaaaccttctctggatgaagcatttgtcattcaggagcagaatgttgctctaaacttt
attggatcaagaggtgcaaagccaggtgtcaccaaagaaaagagaatcaagtatgctaaa
gaggtcttgcagaaagaaatgcttccgcatgttggtgtcagtgacttctgtgaaaccaag
aaggcctattttctagggtatatggttcacagattgttattggcagcactgggaagaaga
gagcttgatgacagagatcattatggcaataaaagactggatcttgctgggccactgtta
gctttcctgttcagaggaatgtttaagaatttgctgaaagaagtgagaatatatgctcaa
aagttcattgacagagggaaggatttcaacttggaactggcaattaaaacaagaattatt
tcagacggtttgaagtattcgttggcaactggaaactggggtgaccagaagaaagctcat
caggccagagcaggagtatctcaggtgttaaaccgcctgacttttgcatctacgctttcc
catctgaggcgcctgaattctccaattggtcgagatggtaaactagcaaagccgaggcag
ctgcacaacacgctgtggggaatggtttgccctgctgaaaccccagagggtcatgcagta
ggacttgtgaagaacttagctctgatggcttacatttctgtggggtctcagccatcccca
attttggaattcttggaagagtggagtatggaaaacctggaagaaatctctccagcagca
atagctgatgctactaagatctttgttaatggctgctgggtaggaatacacaaagatcca
gagcagctcatgaataccttaaggaagctccgtcgtcagatggacatcattgtgtcagag
gtctcaatgattagagatattcgtgagcgagaaatccgcatctatactgatgcaggcaga
atttgtcggccccttttaattgtggagaaacagaagttgctgttgaagaaaaggcatatt
gaccaactgaaggaaagggagtataacaactacagttggcaggatctcgtggccagtggt
gtagtggagtacattgatacgctggaagaagagaccgtgatgctggcaatgactccagac
gacttgcaagagaaaggtgtggcatattgttcaacatacacacactgtgagatccaccca
tctatgatcctgggagtatgtgcatccattatccctttccctgatcacaaccagtctccc
aggaacacgtaccagtctgctatgggtaagcaggctatgggagtttacatcaccaacttt
catgtccgcatggacacgctggcacatgtcttgtattaccctcagaagcccctggtaacg
acgcgctccatggagtacctgcgatttagagagttaccagcaggtatcaactctattgta
gccattgcatcatacacgggctataaccaagaggactctgtcatcatgaaccgttctgct
gttgacagaggctttttcagatctgtgttctatcgctcctacaaagagcaggagtctaaa
aaagggtatgaccaagaagaagtttttgaaaagcctacacgtgaaacttgccaaggtatg
agacatgcaatctatgacaaacttgatgatgatggtttgatagcacctggtgtacgtgtg
tctggagatgatgtcatcattggcaaaacagtaacactgccagaaaatgaagatgaactg
gaaagcacaaacagacgcttcacaaagagagactgcagcactttcctgcgaactagtgag
actggtattgtagatcaggtcatggtaacccttaaccaggaaggatacaagttctgcaag
attagggtacgctctgtaagaatcccacaaattggagataaatttgccagcagacatggt
cagaagggaacctgtggtatccagtacaggcaagaggatatgcctttcacctgtgaaggc
atcacccctgatataattatcaacccccatgccatcccttcccgtatgaccattggtcac
ttgatcgagtgtcttcaggggaaggtgtctgcaaacaagggagaaattggtgatgctaca
ccttttaatgatgccgtcaatgtgcagaaaatttccaaccttctatcagattatggctat
catctaagaggaaatgaggtcctctacaatggcttcactggtcgaaaaatcacgtcacag
atcttcattggtcctacatattatcagcggttgaagcacatggtagatgacaaaatccac
tctcgtgcaagagggccaatccagatccttaatagacagcccatggaaggcagatctcgt
gatggtggccttcgttttggagaaatggaacgagactgccagattgctcatggagcagcc
cagttcctgagagaaaggttgtttgaagcttcagacccgtaccaagtccacgtctgtaac
ctctgtggaatcatggcgatagcaaacacacggacccacacctacgagtgccggggatgc
cgtaacaaaacccagatctctttggttcgaatgccctatgcctgcaaactcctcttccaa
gaactgatgtctatgagcattgcacctcgtatgatgagtgtttag
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integrated database retrieval system
