Pogoniulus pusillus (red-fronted tinkerbird): 135178250
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Entry
135178250 CDS
T10504
Symbol
PDLIM3
Name
(RefSeq) PDZ and LIM domain protein 3 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135178250 (PDLIM3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppus04990
]
135178250 (PDLIM3)
Domain-containing proteins not elsewhere classified [BR:
ppus04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
135178250 (PDLIM3)
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Ortholog
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
135178250
NCBI-ProteinID:
XP_064005051
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All DBs
Position
9:complement(26809613..26831380)
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AA seq
403 aa
AA seq
DB search
MPQNVVLQGPAPWGFRLSGGIDFNQPLIVTRITPGSKASAANLCPGDVIVAIDGLSTENM
THNEAQERIKAAAHQLCLKIERAGTKLWSPQVSEDGKAHPFKINLEAEPQEFKPIGTAHN
RRAQPFVAAANIDDKRQVVSSSYNSPIGLYSSGNIQDALHGQLRGLIPNSPQNGCSTPSG
IDCGSGRSTPSSISTVSSICPTELKAVSKMAPNIPLEMELPGVKIVHAQFNTPMQLYSDD
NIMETLQGQVSTALGETPIISDLSPNSVSQSDVYKMLHANQEEPSQPRQSGSFKVLQNLV
SEEDGRPAGTRSVKAPVTKMPTAMPGVQKVPLCDKCGSGILGTVVKARDKYRHPECFVCS
DCGLNLKQKGYFFVEGQLYCEAHARARMRPPEGYEAVTVYPKC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaaacgtcgttctccaaggaccggcaccctggggattcaggctttcaggaggg
atagattttaatcaacccttaatcgtaaccaggattacacctggaagcaaagcttcagct
gccaacctatgccctggtgatgttattgtagctatcgacggtctaagcacagagaacatg
acacacaatgaagcccaggagagaattaaagcagctgcacatcagctttgtttgaaaata
gagagggcagggactaaattatggtccccacaagtttcagaagatggcaaagctcatccc
ttcaagataaatttagaagctgaaccacaggaattcaagcctattggtacagctcacaac
agaagggcccagccttttgttgcagcagcaaatattgatgacaaaagacaggtagtgagc
tcctcctataattctccaattgggctgtattcatctggcaatattcaagatgcactccat
ggacaactgaggggtctcattcccaattcaccacaaaatggatgcagcactccttcaggg
attgactgtggcagtggacgcagcaccccctcttcaattagcacggttagctctatctgc
cccaccgagctgaaagcagtgtctaagatggcccctaacattcccttggaaatggagctt
cctggtgtcaagattgtacatgctcagtttaacacacccatgcagttgtactcagatgac
aatatcatggaaacattgcaaggccaagtttctacagctctgggggaaacacccataata
agtgacctatctcccaactcagtgtctcaatctgatgtgtacaagatgctgcatgccaac
caggaggaacccagtcaacctcgacagtctggctcctttaaggtgctccagaatttagtc
tccgaggaagatggacgtcccgcgggtacaaggagcgtgaaagcacctgtaacaaagatg
cctactgccatgcctggcgtccagaaagtgccactgtgtgacaagtgtgggagtggcatt
ctcggaacagtggtgaaggcacgtgataaataccggcacccagaatgttttgtgtgctct
gactgcggtctcaacctgaagcaaaaaggatacttctttgtggagggccagctgtactgc
gaagcccacgcacgagctcgcatgaggccaccagaaggctatgaagcagttacagtttac
ccaaagtgttag
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