Pogoniulus pusillus (red-fronted tinkerbird): 135178270
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Entry
135178270 CDS
T10504
Name
(RefSeq) general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135178270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppus03021
]
135178270
Transcription machinery [BR:
ppus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
135178270
Prokaryotic type
Archaeal type
TFE
135178270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
Zn_ribbon_PaaD
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
135178270
NCBI-ProteinID:
XP_064005119
LinkDB
All DBs
Position
9:28754259..28758667
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AA seq
418 aa
AA seq
DB search
MEEKSVTTEVPAALQHLAKYIVRGFYGVEFCLAFDVLIRYRCVKEDDLLQLLKYEHKQLR
TILNTLKADKLVKLRMRVETGPNGKSTRHNYYYINYKVLVDVVKYKLDHMRRKIEADERD
STTRSSFKCPSCSSTYTDLEVNQLFDVFTETFRCTYCNAEVEEDASALPKRDARTLLAKF
NEQMEPIFVLLREIEDTILTYDLLEPQPAEIPELTQSFDQVESSMLESCSQLEKLANRSS
SSGNMYTQNFVIDIQDSEPKKRRKEKATKEQPVWMSQSTIEGATTASNSSIGVKASEESV
KETLTGNEIIKTLLMHEFKSSSSSTDQAPVVKSKVPEPDSDSESEEEAKHSRAGMKTAGS
NCDQEKEQEMLSPILMVGGQPHSYGEVCENPDLVSLMTNEEREAYIKVGQEMFQSVFE
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaaagtgttacaacagaggttccagcagccctacagcacctggccaaatac
atcgtgcgtggtttctatggagtagagttctgcctggcctttgatgtgctgatccgctac
cgctgtgtgaaggaggatgacttgctgcagttgctcaagtatgaacataagcagctgcgc
accatcctcaacacgctcaaggcagacaagctcgtgaagctgcgtatgcgagttgaaaca
gggcccaacgggaagagcacgaggcacaattattactacatcaactacaaagtgctggtg
gacgtggtaaaatacaaactggatcatatgcgccggaaaatagaagcagatgagcgggat
tcaaccaccaggtcctcttttaaatgtccatcatgctccagcacttacacagacctggaa
gtcaatcagctctttgatgtgtttacagagactttccgctgcacctactgcaacgctgaa
gtagaagaagatgcctcggcgcttcccaagcgcgatgctcgaaccttgctagcaaaattc
aatgagcagatggaacccatctttgtgctgctgcgggagattgaagacactattctgaca
tatgacttgctggaacctcagcctgcagagataccagaattaacacagagctttgatcag
gtggagtcaagcatgctagaatcttgcagccaacttgaaaaattggccaacagaagttcc
tcttctggcaatatgtacactcaaaacttcgttattgatatccaagactccgagcccaag
aagaggagaaaagagaaagcaaccaaagaacaacctgtctggatgtcacagagcaccata
gaaggagcaacaacagccagtaacagtagcattggagtaaaggcttctgaagaaagtgtt
aaagaaactcttactggcaatgaaatcatcaagactcttctgatgcatgaattcaagtca
tcatcatcaagcacagaccaggctcctgttgtcaaaagcaaagtacctgaaccagacagt
gatagtgagtctgaagaagaggccaagcattcaagagcaggaatgaaaacagcaggcagc
aactgtgaccaagagaaggaacaggaaatgctgagtcctattttaatggtaggtggtcag
cctcattcatatggtgaagtctgtgaaaatccagaccttgtctctctaatgacgaatgag
gagagagaagcttacataaaagtagggcaagaaatgttccagtcagtctttgaataa
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