Pogoniulus pusillus (red-fronted tinkerbird): 135178396
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Entry
135178396 CDS
T10504
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03013
Nucleocytoplasmic transport
ppus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135178396 (PNN)
03015 mRNA surveillance pathway
135178396 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppus03019
]
135178396 (PNN)
03041 Spliceosome [BR:
ppus03041
]
135178396 (PNN)
Messenger RNA biogenesis [BR:
ppus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135178396 (PNN)
Spliceosome [BR:
ppus03041
]
Complex C
Other components
EJC/TREX
135178396 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
135178396
NCBI-ProteinID:
XP_064005426
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All DBs
Position
1:40510904..40521043
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AA seq
692 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPPQNRLLSITGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAISRLGGERRTRRESRQESDAEDDDIKKPALPSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLMDESQRKMNALFESRRNEFAEQINKMEARPRRQSVKEKEQQEVQN
EEKKEEQNKEQEEGKVAQQVEEVETGNQHNDVEMEELGEEKGKTGSGHSDAEKEQEEDEQ
KHEMEIKVEETAEVRENDKQQDGQHEEVTVLKDENENIQPVDNDQDMAEMNEADSVEPVE
NENGKAEPETECDAQSEKVCNDPSPGKEKGIKQEIEAESEIKQEIAPEVQTEPMAEGLSQ
LQSVPLPQSPQLSQSTQDTETQADKDENSLVSVKVTEAQTEQSQAPSVEIKNKTRSRSRV
RAGNKAGKSHSRSSSSSSSSSTSSSTTSGSSSSTGSSTTRSSSTSSSTTSGSTSRDSSSS
SSSSSESRSRSRGRGHNRDRKRRRSTDRKRRDASGVDRSHKSSKGGSRDTKSSKDKSSRS
DRKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcgtgcgctgcaggagcagctggagaaagctaaagagagcctcaag
cacgtggacgaaaacatccgcaagctcacgggacgggaccccaatgatgtgaggccccct
caaaacagactgttatccatcacaggccctggtggaggtagagggcgtgggagcttattg
ctaaggcgtggattctcggatagtggaggaggacccccagccaagcagagagatcttgaa
ggggcaatcagtcggctgggtggagaacgtcggacaagaagagaatcacgccaagaaagc
gacgcagaggatgatgatatcaaaaagccagcgttgccatcttctgttgttgctacctcc
aaagagcgaacacgtcgagaccttatacaagatcaaaatatggatgagaaaggaaaacaa
aggaatcgacgtatatttggcttgttgatgggcactcttcaaaagtttaaacaggagtcc
acagttgctactgagaggcaaaagagacgacaagaaattgaacaaaaacttgaagtgcag
gcagaggaggaaagaaagcaagttgaaaacgaaaggcgagaactgtttgaagaaagacgt
gctaaacagacagagctgcggttgctggagcagaaggttgagcttgctcagttgcaagaa
gaatggaatgagcacaacgctaaaataattaaatacataagaactaagacaaaaccccac
ttattctacatacctggcagaatgtgtcctgctacacagaagctgatggacgagtcacag
agaaaaatgaatgcactcttcgaaagcaggcgaaatgaatttgcagagcagattaacaaa
atggaggccaggcccagaagacaatctgtgaaggaaaaagaacagcaggaggtgcagaat
gaagaaaagaaggaagaacagaacaaggagcaggaagagggtaaggtggctcagcaggtg
gaagaggtggagacaggtaatcagcacaatgatgtagaaatggaggagttaggggaggaa
aagggaaaaacaggttcagggcatagtgatgcagagaaagaacaggaagaggatgaacag
aaacatgaaatggagatcaaagtagaagagactgctgaggtgagggagaatgacaagcaa
caggatggtcagcatgaagaggttactgttctaaaagatgaaaatgaaaacattcagcca
gtggataacgatcaggatatggctgaaatgaatgaggcagatagtgtagagcctgtagaa
aatgaaaatggcaaagcggaaccagaaacagagtgtgatgctcagtcagaaaaagtgtgt
aatgatccttctcctgggaaggagaaaggtatcaaacaagaaattgaagctgaatctgaa
ataaaacaggaaatagcacctgaagttcagacagaacctatggctgagggtctatctcag
ctacagtctgtgccattgccacagtcgcctcagttgtctcagtccactcaggatacagag
acccaggcagacaaggatgaaaactctctggtatctgtaaaggtgactgaggcacagaca
gagcagagtcaggcaccaagtgtagaaattaagaataagactaggagtagaagcagggtt
agggcagggaacaaagctggtaaaagtcatagccgtagtagcagcagcagtagtagcagt
agtacttcaagcagcactactagtggaagtagttccagcactggcagcagtactactcgg
agtagttccaccagtagcagcactacaagtggcagtactagtagggacagtagcagcagt
agctctagcagtagtgaaagtagaagtcgaagccgaggaagagggcataacagagataga
aagcgcagaaggagcacggacaggaagcgaagggacgcttcaggagtagatagaagtcac
aagtcctcaaaaggtgggagtagagatactaaaagctcaaaggataaaagttcaagatct
gacagaaagaggtctatatcagaaagtagtcggtcaggcaagagaacttcacggagtgaa
agagaccgtaaatcagacaggaaagacaaaaggcgttaa
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