Pogoniulus pusillus (red-fronted tinkerbird): 135179254
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Entry
135179254 CDS
T10504
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03013
Nucleocytoplasmic transport
ppus03015
mRNA surveillance pathway
ppus03040
Spliceosome
ppus05168
Herpes simplex virus 1 infection
Brite
Messenger RNA biogenesis [BR:
ppus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135179254 (ALYREF)
TREX complex
135179254 (ALYREF)
Spliceosome [BR:
ppus03041
]
Complex C
Other components
EJC/TREX
135179254 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135179254 (ALYREF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
135179254
NCBI-ProteinID:
XP_064006903
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All DBs
Position
11:complement(7890576..7895286)
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AA seq
255 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGAGRGGGRGGRGRGGATRGGGPGRGGVGAGRAGGGPLRNR
PLMARGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAGAGVETGGKLLVSNLDFGVSDADI
QELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT
SQIDTQRRPAQSVNRGGMTRSRGASGFGGGGGNRRGTRGGNRGRGRGAGRTSKQQLSAEE
LDAQLDAYNARMDTS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatggacatgtccctggacgacatcattaagctcaaccggagccagcgg
ggcgccggccgaggcggcggccggggtggccggggtcggggcggcgccactcgcggcggt
gggcccggccggggcggcgtgggagccgggcgagcgggcggcggccctttgcggaacagg
ccactgatggcccggggcggcggcaggaaccggcccgcgccctacagccggccgaaacag
ctccccgagaaatggcagcacgacctgttcgacagtggcttcggcgctggggcaggcgtg
gagaccggcgggaagctgcttgtctcgaacctggatttcggcgtttcggatgcggacatt
caggagctctttgcggagtttgggaccttgaagaaggcagctgtgcactacgacaggtct
gggcgcagcctagggacagcggacgtgcacttcgaaaggaaggcagacgctctgaaagca
atgaagcagtacaatggggtccccttggatgggcgccccatgaatatccagctggtcacg
tcacagattgacacacagaggagaccagcacaaagtgtaaacagaggtggcatgaccaga
agccgtggtgcttcaggatttggtggtggaggaggcaacaggcgaggcactcgtggtggg
aacagagggagaggcagaggagctgggagaacttccaaacagcagctctctgcagaagaa
ctagatgcacagctggatgcttacaatgccaggatggacaccagctaa
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integrated database retrieval system
