Pogoniulus pusillus (red-fronted tinkerbird): 135179486
Help
Entry
135179486 CDS
T10504
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135179486 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ppus00536
]
135179486 (SLIT2)
Glycosaminoglycan binding proteins [BR:
ppus00536
]
Heparan sulfate / Heparin
Axon guidance molecules
135179486 (SLIT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
hEGF
LRR_1
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_TGFA-like
EGF_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
135179486
NCBI-ProteinID:
XP_064007407
LinkDB
All DBs
Position
11:complement(19813642..20034245)
Genome browser
AA seq
1537 aa
AA seq
DB search
MMCGWGKFTLSLGLLLAMAGEVAPQPCPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLD
LNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSEL
LFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLT
LNNNNITRLSVASFNHMPKLRTFRLHSNNLFCDCHLAWLSDWLRQRPRVGLYTQCMGPSH
LRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPTACTCSNNIVDCRGKGLTEIPTNLPET
ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKIT
ELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA
IQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAK
EQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELRLN
NNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLESVRHKM
FKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNL
LANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSC
SPLSRCPAECTCLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTL
IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVP
EGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTP
SKKFTCQGPTDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDIPIHAC
ISNPCHHGGTCHLKEGEKDGFWCTCADGFEGENCEVNVDDCEDNDCENNSTCVDGINNYT
CLCPPEYTAANLNEVEKGELCEEKLDFCAQNLNPCQHDSKCILTPKGYKCDCTPGYVGEH
CDIDFDDCQDNKCKNGAQCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNYECQN
GAQCIIKENEPICQCLSGYQGEKCEKLISINFVNKESYLQIPSAKIRPQTNITLQIATDE
DSGILLYKGDKDHIAVELYRGRVRVSYDTGSYPASAIYSVETINDGNFHIVELLAVDQIL
SLSIDGGSPKTITNLSKQSTLNFDSPLYVGGMPVKNNIAALRQSPGQNGTSFHGCIRNLY
INSELQDFRNVPLQVGILPGCEPCHKKVCVHGTCHATSQSGFSCECEGGWTGPLCDQQTN
DPCLGNKCVHGTCLPINAFSYSCKCLQGHGGVLCDEEEMLFNPCQSIRCKHGKCRLSGLG
KAYCECSSGYTGDSCDKEISCRGERIRDYYQKQQGYAACQTTKKVSRLECRGGCSAGQCC
GPLRSKRRKYSFECTDGSSFVDEVEKVVKCGCANCPS
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcggctgggggaagttcaccctgtccctggggctgttgctggcgatggcgggc
gaggtggcgccgcagccgtgcccagcgcagtgctcctgctcgggaagcaccgtggactgt
cacgggctggcgctgcgcagtgtcccgaggaacatcccccgcaatacagagaggctggat
cttaatggaaataacatcacaagaatcaccaagactgactttgctggtctaaggcacctt
cgagttcttcagctcatggagaacaagattagtactattgaaagaggagcattccaagat
ttaaaagaactggagaggctgcgcttaaacagaaataaccttcagttgctttctgaactg
ctctttctggggacgccgaagttgtacaggcttgatcttagtgaaaatcagattcaagca
ataccaaggaaggcattccgaggagcagtagacataaaaaatctgcaactggattacaac
cagatcagctgcattgaagatggggcatttagggctctgcgcgacctggaagtgctcaca
ctcaacaacaacaacatcacacggctgtctgtggcaagtttcaaccatatgcccaaactc
agaacatttcgtcttcactccaacaacctcttctgtgattgccacctggcctggctgtct
gactggctgcggcagcggccacgggttggcctctacacccagtgcatgggaccatcccat
ctccggggacacaacgtagctgaagtccaaaaacgggagtttgtttgcagtggtcaccag
tccttcatggccccctcctgcagtgtcttgcactgccccactgcgtgcacctgtagcaac
aacattgtggactgccgtgggaaaggcctcactgagatcccaacgaaccttccagaaacc
attactgaaatacggttagaacaaaactcaatcaaggttatacctcctggagctttctca
ccatacaagaaacttcgaagaattgacctgagcaataaccagatctctgaagcagctcca
gatgcattccagggtttacgctcactcaattcacttgtcctctatggcaataaaattaca
gaacttccaaaaggcctttttgaaggactcttttctctgcagttgctattattgaatgct
aacaagatcaactgcctgcgagttgatgcttttcaagatctgcacaacttgaatcttctt
tctttgtatgacaacaagcttcagacaattgcaaaaggcaccttctcacccctacgtgca
attcagaccttgcatttggctcagaacccatttatctgtgactgccatctgaagtggctg
gcggattatcttcatacaaaccccattgagaccagtggtgcccgttgcaccagcccccgc
cgtctggcaaacaaaaggattggccagatcaaaagcaagaaattccgctgctcagctaaa
gaacagtatttcattccaggcactgaagattacagatccaaattaagtggagactgcttt
gcagatttggcttgccctgaaaaatgtcgctgtgaagggaccacagtggactgctccaat
cagaaactcaacaaaattcctgatcacatcccacaatacacagcagagttgcggctaaat
aacaacgaattttcagtcctggaagctactggaatctttaagaaacttcctcagctgcgt
aaaataaacctgagcaataacaagattacagatattgaggaaggagcatttgatggagcc
tctggtgtaaatgaactcttgctcacgagcaaccgcttggaaagtgtgcgacacaaaatg
ttcaaaggactagaaagtctcaaaacgctgatgctgaggagcaaccgtgtgagctgtgtg
ggaaatgacagcttcacaggcctgagctcagtccgcctgctctccctctatgacaaccag
atcaccactgtggcacctggctcctttgatacactgcactcactctctacactaaacctc
ttggccaatcccttcaactgcaactgccatcttgcgtggcttggagactggctaaggaag
aagcgcattgtgactgggaaccctcgctgccaaaaaccctacttcctgaaagagattccc
atccaggatgtggcgattcaggattttacatgcgacgatggaaatgatgacaatagctgc
tctccactgtcccgctgtcctgcagaatgtacttgcctagatacagtagttcgctgcagc
aacaaaggtctcaaagctttgcctaaaggcatccccaaagatgtaactgaactttatttg
gatggaaatcagtttactcttgttccaaaagagctttccaactacaagcatttaactctc
atagatttaagtaacaacagaatcagcactctttctaatcagagcttcagcaacatgact
cagctgctcaccttaattcttagttacaaccgcctgaggtgtattcctgcacggactttt
gatggattgaaatcacttaggctgttgtctttgcatggcaatgacatttctgttgttccc
gaaggagcttttaatgatctttcagcattatcacacctggctattggagcaaatcctctt
tattgtgattgtaacatgcagtggctatctgactgggtaaaatcagaatacaaagaacct
ggtattgcacgttgtgctggtcctggagaaatggcagataaacttctgctcacaactcct
tcgaagaaatttacttgccaagggcccaccgatgttaatattcttgcgaagtgtaacccc
tgtttatcaaatccatgtaaaaatgatggaacctgcaacaatgatccagttgacttctac
agatgtacttgcccatatggtttcaagggtcaagactgtgatattccaattcatgcttgt
attagtaacccatgccaccatggaggaacttgtcatttgaaggaaggagaaaaagatggt
ttctggtgtacttgtgcagatggatttgaaggtgaaaactgtgaagtaaatgttgatgac
tgtgaagacaatgactgtgaaaataattctacttgtgtggatggaattaataactatact
tgcctttgtccacctgaatatacagctgctaatctgaatgaagtggaaaaaggtgagctc
tgtgaggagaaactagatttctgtgctcaaaacctgaacccttgccagcatgactcaaag
tgtatcttgacacctaaaggatacaaatgtgattgcacacctggatatgtaggtgagcat
tgtgatattgactttgatgattgccaggacaacaaatgtaaaaacggagcgcagtgcact
gatgcagttaatggatacacgtgtatttgcccagaaggatacagtggcttgttttgtgag
ttttcaccaccaatggttctacctcgcaccagcccctgtgataattatgaatgccaaaat
ggagcccagtgcatcataaaagaaaatgaaccaatctgtcagtgcttatcaggctaccag
ggtgagaaatgtgaaaagctgatcagtataaactttgtcaacaaagaatcctatctacaa
atcccttcagctaagatacgtccccaaaccaatatcactttacagattgccaccgatgaa
gacagtggaatcctgctctacaaaggcgataaagaccacatagcagtagagctgtaccgg
ggtagagtgagggtcagttatgacacaggatcttatccagcctctgctatttacagtgtg
gagactattaatgatggcaatttccacattgtggagctactagctgtggatcagattctg
tctttatctattgatggaggaagccccaagacaattaccaatttgtccaagcaatccact
ctgaattttgattccccactgtatgtaggaggcatgcctgtgaaaaacaacatagcggct
ttacgccagtcgccaggacagaatggcaccagcttccacggttgcatccgtaacctctat
atcaacagtgaactccaggacttcagaaatgtgccactgcaagtgggaattctgccaggt
tgtgagccttgtcacaagaaagtttgtgtgcatggcacgtgccatgctaccagccagtct
ggcttttcctgtgagtgcgaaggaggatggactggacctctctgtgatcaacaaactaat
gacccctgtcttggaaataaatgtgtgcatggtacctgcttgccaatcaatgcattttca
tacagttgtaaatgcctgcagggacatgggggagtcctctgtgatgaagaggaaatgctg
tttaacccctgccagtccatcaggtgtaaacatggcaaatgcaggctttcaggacttggg
aaagcatattgcgaatgcagcagcggatacacgggggacagctgtgacaaagaaatctct
tgtcgaggggaacgaatccgagattactaccaaaagcagcaagggtacgctgcgtgtcag
acgaccaagaaggtatcgagactagaatgtagaggaggatgttcagccgggcagtgctgt
gggccactgaggagcaagagacggaaatactcttttgaatgcactgacgggtcgtcattt
gtggacgaggttgaaaaagtggtgaagtgtggctgtgcaaattgtccctcctaa
DBGET
integrated database retrieval system
