Pogoniulus pusillus (red-fronted tinkerbird): 135179600
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Entry
135179600 CDS
T10504
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppus03019
]
135179600 (HTT)
04131 Membrane trafficking [BR:
ppus04131
]
135179600 (HTT)
03029 Mitochondrial biogenesis [BR:
ppus03029
]
135179600 (HTT)
Messenger RNA biogenesis [BR:
ppus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
135179600 (HTT)
Membrane trafficking [BR:
ppus04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
135179600 (HTT)
Mitochondrial biogenesis [BR:
ppus03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
135179600 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
Rad26-like_helical_rpts
Motif
Other DBs
NCBI-GeneID:
135179600
NCBI-ProteinID:
XP_064007671
LinkDB
All DBs
Position
11:27218413..27294805
Genome browser
AA seq
3096 aa
AA seq
DB search
MATMEKLMKAFESLRSFQQQQVPAAIPEEPLQRPKKELSTTKKDRVNHCLTICENIVAQS
LRNSPEFQKLLGIAMELFLLCSEDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEI
KKNGASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPK
IMAAFGNFANDNEIKVLLKAFIANLKSTSPTIRRTAAGSAVSICQHSRRTQYFYAWLLNV
LLGLLVPVEDDHPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQL
IQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPELLHALTASGGIAQVSVSKDEPASR
SRSGSIVELIAGGGSSCSPVLARKHKGKVLLGEEEGLEDDAETRSDVSAASFAASMKGEI
SSELASSSGVSTAGSVGSSAADPTGHDIITEQPRSQHTLQSDSVELASCDLTSTATEGEE
DDVLSRSSSQISAVQSDPTMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLEGA
EGQYSGMQIGQLQDEEDEAANILQDDSSESFRNSSIALQQPHLLKTTSHSRQPSDSSVDR
FPAKEDATEPGDHENKPSRVKGDIGHYTDGDSAPLVHCVRLLSASFLLTGEKGALVPDRD
VRVSVKALAVSCVGAAIALHPESFFSKLYRTPLEAMGEEYEEQYVSDILNYIDHGDPQIR
GATAILCGTIINSILIKSRFDVEKWLTRVRSSTGNLFSLVDCIPLLQKTLKDESSVTCKL
ACTAVRHCIMSLCSSSYSELGLQLIVDLLTLKNSSYWLVRTELLETLAEVDFRLVSFLEG
KTESLHRGIHHYTGLLKLQERVLNNVVICLLGDEDPRVRHVAAASLIRLVPKLFYNCDQG
QADPVVAVARDQSGVYLKLLMHETQPPSHFAVSTITRTYRGYNMVQSPTDVTMENNLSRV
IAAISHALTISTTRALTFGCCEALCLLSTTFPVCTWSVGWQCGVSQPSPSDETQKGCTIG
VAGMVLSLLSSAWFPLDLSAHQDALILTGNLLAANAPKCLKNPWSAEDDSTQGTAKQEEP
WPALADRALVTLVEQLFSHLLKVINICAHVMDDVAPGPAVKAALPSLTNPPSLSPIRRKG
KERESAEQASVPMSPKKGGEASPATRQADAAGPVPTSKSSSVGSFYHLPSYLKLYDVLKA
THANYKVTLDLQNSSEKFGCFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFNREP
TMATVCVQQLLKTLFGTNLASQYDGLSSNPNKAQGKAQRLGSSSVRPGLYHYCFMAPYTH
FTQALADASLRNMVQAEQEHDASGWFDVLQKVSTQLKSNITSAAKHRADKNAIHNHIRLF
EPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVG
QFRESEAIIPNVFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPI
VHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDRWKR
LSRQIADIILPMLAKQQMHIDSHEALGVLNTLFEILAPSSLRPVDMLLRSMFVTPKTMAS
VNTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISCQAINRLRCGENNLTAPE
DHPEAKQAKYLPEETFSRFLLQLVGILLEDIVTKQLKVDMNEQQHTFYCQELGTLLMCLI
HIFKSGMFRRITAAATRLFTGDGSDGSFYTLESLSDLVQSMIPTHPSLVLLWCQILLLVN
YTNYNWWSEVHQTPKRHSLSTTKLLSPQISGDSSESNAELKRGMCNREIVRRGALILFCD
YVCQNLHDSEHLTWLIVNHVQDLINLSHEPPVQDFISAIHRNSAASGLFIQAIQSRCENL
AAPTTLRKTLQSLEGIHLSQSGAVLTLYVDKLLCTPFRVLARMVDMLACRRVEMLLAATL
QNSITQLPVEELDRIQEYLQSSGLATRHQRLYSLLDRFRLMVAPDTTSPSPLVTSHPLDG
EDQPALENVILDKDWYVSLVRSQCYVKSDSALLEGAELVNKIPQPDLNSFMTSKEFNLSL
LAPCLSLGMHEISRDQKSSFFETARRVTLDHVSAAVQHLPASHQVFQPLLPTEPSAYWKK
LSDIFGDEGMFQSVMTLCRALAQYLLLLSKLPAGLRVPPDKEDDILKFIVMSVEALSWHL
MHDRIPLSVDLEAALDCCCLTLQQPNLWNLLASAANVTYACSLINCVRFIIEAVAVEPGN
QLLSPERKKNTSKGLSEGEADSSTPKAKHITAACEMVAEMVECLQTVLALGHKRNASIPA
FLTPVLKNIIISLARLPLVNSYTRVPPLVWKLGWSPKPAGDFGTVFPEIPVEFLQEKEIF
KEFIYRINTLGWISRTQFEETWATLLGVLVTQPIVMDQEENQQEEDTERTQINVLAVQAI
TSLVLSAMTIPVAGNPAVSCLEQQPRNKALKALDTRFGRKLSVIRGIVEQEIQAIVSKRD
NIATHHLYQAWDPVPSLSPATTGALISHEKLLLQINTEREIGDMDYKLGQVSIHSIWLGN
NITPLREEEWGEDEEDENDTPAPSSPPTSPVNTRKHRAGVDIHSCSQFLLELYSQWILPS
NPSKRTPVILISEVVRSLLAVSDLFTERNQFEMMYTTLTELRKVHPSEDEILVQYLIPAT
CKAAAVLGMDKAVAEPVSRLLESTLRSTHMPSRIGALHGILYILECDLLDETAKQLIPII
SEYLLSNLRGVAHCVNIHNQQHILVMCATAFYLIENYPLDVGPEFSAGIIQMCGVMVSGS
DESTPSIIYHCVLRGLERLLLSEQLSRLDSESLVKLSVDRVNVQSPHRAMAALGLMLTCM
YTGKEKVSPSRTADANPAAPDSESVIVAMERVSVLFDRIRKGFPFEARVVARILPQFLDD
FFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQR
TPVAMAMWSLSCFFVSASTSQWISAILPHIISRMGKSEQVDVNIFCLVAIDFYRHQIDEE
LDRRAFQSVFEVVASPGTPYHRLLTCLQNVHKVTAC
NT seq
9291 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagttgatgaaggccttcgagtcgttgcgctccttccagcagcag
caggttccggctgccatccccgaggagccgctccagagaccaaagaaagaactttcaact
accaagaaagatcgagttaatcattgtctaacaatatgtgaaaacatagttgctcagtcc
ttaagaaattctccagagtttcagaagctgctgggaattgcaatggaactcttcctgctc
tgcagtgaggatgcagaatctgatgtccggatggttgctgatgaatgccttaataaagtt
attaaagctttgatggattccaatcttcctaggttacaattagagctgtataaagagatt
aaaaagaatggtgcttccagaagtctacgtgctgctctctggagatttgctgagcttgcc
catctagttcggcctcaaaagtgcaggccatacctggtgaaccttttgccctgtctaaca
cggatcagtaagagacctgaggagtcagtacaggagacactagctgcagcaataccaaaa
atcatggcagcctttggcaattttgcaaacgacaatgagatcaaggtgttactgaaggct
ttcatagctaatcttaaatccacttcccctacgatccgtcgaacagctgcaggatcggct
gtgagcatctgtcagcactcgcggagaacgcagtatttttatgcctggctattgaatgta
cttctaggcttgttggttcctgtagaagatgatcaccctactcttttaattctgggtgtt
ttacttacactaaggtatctcatacctttattgcaacaacaagtgaaggataccagcctg
aaaggcagttttggtgtaacaagaaaagaaacagagatttcaccttcaccagaacagctg
atacaggtttatgaattgactctgcattacactcagcatcaggaccataatgttgtgact
ggagctttagaattattacagcagctcttcagaacacctccacctgaacttctgcatgct
ctgactgcttcagggggtattgcacaggtcagtgtatccaaagacgaacctgccagcagg
agccgcagtgggagcatagtggaactgatagctggaggggggtcttcatgcagccctgtt
cttgcaagaaagcataaaggtaaagtacttcttggtgaagaagaaggtttggaggatgat
gctgaaacccggtcagatgtcagtgctgcatcctttgcagcttctatgaagggtgagata
agcagtgaactagcttcttcatcaggtgtctcaacagctgggtcagtggggagttcagct
gccgaccctactggccatgatatcattactgagcagccgcgttctcagcatacattgcag
tcggactctgtggagctggcaagctgtgatttgacaagcacagctactgaaggggaggaa
gatgatgtgctcagtcgaagctccagccagatcagtgctgtgcagtcagatcccactatg
gacttgaatgatggtacacaggcttcctcaccaatcagtgatagctctcagactactaca
gaaggtcctgactctgctgtaaccccttcggacagttctgaaattgttttggagggtgct
gaaggacagtattctggaatgcaaattggacagctgcaggatgaggaagatgaggctgca
aatattctccaagatgattcatcggagtctttcagaaattcttctatcgctcttcaacag
cctcacctgttgaaaaccaccagccatagtaggcagccttcagacagcagcgtagacaga
tttccagcaaaggaagatgcaacagagcccggtgatcatgagaacaagccctccagggta
aaaggagacataggccactacaccgatggagactccgctcctttagtgcactgcgttaga
cttctgtctgcctcttttctgcttactggggagaaaggagctttagttcctgacagagat
gtgagagtcagtgtaaaggctctggcagtgagttgtgttggagcagccattgcacttcac
cccgagtctttcttcagcaaactgtatagaacacctcttgaagcgatgggagaagagtat
gaagagcagtatgtatcagatatcctgaactacattgaccatggagatccccagatcaga
ggagctactgcaattctgtgtggaacaattatcaactccattctcattaaatcccgcttt
gatgtggagaaatggctgactcgcgtcagaagctcgacaggaaatctcttttccttggta
gactgcattcctctgttacagaaaacactgaaggacgagtcctctgttacttgcaaactg
gcttgtacagctgtgaggcattgcatcatgagtttatgtagcagcagttacagtgaatta
ggtttacagttaattgttgacctcctcactctgaagaacagctcctattggctggtaagg
acagaacttctggaaacactggcagaggtagactttcggttagtcagcttcttggaagga
aaaactgagagtttacacagaggtattcatcattatactggtctactgaaacttcaggag
agagtgcttaataatgttgtaatatgtctgcttggagatgaagatcccagagtgagacat
gtagctgcagcttcattaattaggcttgttccaaagctgttctataactgtgaccaagga
caggctgatccagttgtggcagtagcaagagaccaaagcggtgtctacctgaaactactc
atgcatgaaactcagcctccatctcactttgcagtgagcactatcaccagaacatacaga
ggttacaacatggtgcaaagtccaacagatgttactatggagaacaacctctcaagggtt
atcgcagccatttcccatgccttgacaatctccactacaagagcacttacgtttggctgc
tgtgaagctttgtgtcttctctccacaacgtttccagtctgcacctggagtgtgggatgg
cagtgtggtgtttctcagccaagtccttcagatgaaactcagaagggttgcactattgga
gtggctggcatggtcctgtctctgctttcatcagcatggttcccactggacctctctgca
catcaggatgctttgattttgactggaaacttgcttgcagcaaatgcccccaagtgctta
aagaatccctggagtgctgaagatgattccacccagggcactgcaaagcaggaggaacct
tggccagctctggcagatagagctcttgttaccttagtagaacagctcttctctcacctg
ctgaaggtcattaatatttgtgcacatgtcatggatgatgttgctcctggccctgcagtg
aaggcagcattaccttctctcacaaacccaccttctcttagtccaattcggaggaagggg
aaagagagagagtctgctgaacaggcatctgtgccaatgagccctaaaaaaggtggtgaa
gcaagtccagctactaggcaagctgatgctgctgggcctgttccaacaagtaaatcgtct
tcagtaggaagcttttatcatcttccatcatatctgaagttgtacgatgtcttgaaagca
acccatgctaattataaggttactttggatctccagaacagtagcgaaaagtttggatgt
ttcttacggtctgccctagatgttctgtctcaaatcctggaacttgctactcttcaggac
attggaaagtgtgtagaagaaattttgggatacctgaaatcatgtttcaacagagaacca
acaatggcaacagtctgtgtacagcagttattaaaaacattgtttgggacaaatctggct
tctcagtatgatggcttgtcttcaaaccccaacaaagctcaaggcaaagctcaacgcttg
ggttcttccagtgtgagacctggtctctatcattactgcttcatggcaccatacacacat
ttcactcaggcccttgctgatgccagtctaaggaacatggttcaggctgagcaggagcac
gatgcttcagggtggtttgatgtgctacaaaaagtttctacacagctgaaaagtaacatt
accagtgcagcaaagcatcgtgctgataagaatgctattcacaatcacattcgtttattt
gaaccccttgtcataaaagcattgaaacaatatactaccacaacatcagtacagctgcag
agacaggttctggacctgcttgctcaactggttcagctacgagttaactactgccttctg
gattcagatcaggtgtttattggatttgtgctgaagcagtttgaatacattgaagtcggg
cagttcagggaatctgaggcaatcattcctaatgtcttctttttcctggtgttgctgtct
tacgagcggtatcattccaagcagataattggaatccctaagatcattcagctgtgtgat
ggaatcatggccagtgggaggaaagctgttacacatgcaattccagctttacaacccatt
gttcacgatctctttgtgttgagaggaacaaataaagctgatgctggaaaagagttggaa
acacaaaaggaggtggtagtgtcaatgctgctgagacttattcagtaccatcaggtacta
gaaatgttcattttagtattgcaacagtgccacaaagaaaatgaagacagatggaaaaga
ttgtcccggcaaatagctgacattattctcccaatgcttgcaaaacaacagatgcacata
gactctcatgaggctctgggagtattgaacaccttgtttgaaattctggctccttcatcc
cttcgccctgtggacatgcttttaaggagtatgtttgttactcctaaaacaatggcatct
gtgaacactgtccagctgtggatttctggaattttagctatccttagagtcctgatttca
cagtcaacagaagacattgttctgtcacgtatacaagagctttccttctctccatatttg
atttcatgtcaagccatcaacaggctgagatgtggagaaaataacctaacggcaccagag
gatcatccagaggccaaacaggccaagtacctgcctgaagagaccttctctaggttctta
ttacaacttgttggcattctgttggaagatattgttaccaaacagttgaaagtggacatg
aatgagcagcagcatactttctactgccaggagctgggcacactgcttatgtgcctaata
catatcttcaagtcagggatgttcagaagaatcacagctgcagccaccaggctttttaca
ggagatggatctgatggtagtttctataccctggagagtttgagtgaccttgttcagtcc
atgattcccacacatccttctttagttctcctttggtgtcaaatcctgcttcttgtcaat
tacaccaactacaactggtggtcagaagtgcatcaaaccccaaagagacacagtctttct
acgactaagttgcttagccctcagatatctggggacagcagcgaatccaacgcggaattg
aaacgtggcatgtgcaatcgagagatagtgagaagaggagctctcattctgttctgtgac
tatgtttgtcagaacctacatgattcagaacacttgacctggcttattgtgaatcatgtt
caagacttgattaacctgtcccatgagcctccagtgcaagattttattagtgctattcac
aggaattcagcagccagtggtctcttcatccaggccattcagtcacggtgtgagaatctt
gcagctcccacaactctaaggaagactttacagagcttagaaggaatacatctcagccag
tctggggctgtcttaacattatatgtggataagctgctgtgcactcccttccgtgtgctg
gcacgcatggtggacatgctggcttgccgtcgggtagagatgctgctggctgcaactttg
cagaacagcattactcagttaccagttgaagaacttgatagaattcaggaataccttcaa
agcagtggactagcaacaagacaccaaagactttactcactcttggataggtttcgtctt
atggtagcaccagatacaactagtccttcacctctggttacctcacacccactagatgga
gaagaccaaccagctttagagaatgtaatcctagacaaagactggtatgtgtcactagtg
aggtcacagtgttacgtcaagtctgattcagcactgctggaaggtgcagagctggttaat
aagattcctcagcctgacctgaactccttcatgaccagcaaggaattcaacctgagcttg
ttagctccttgtttaagccttggcatgcatgaaatatccagagaccagaagagcagcttc
tttgagacagctcggagggtaactctggatcatgtgtctgctgctgtacaacaccttcct
gccagccaccaggtttttcaaccactgttgccaactgaaccatcagcctactggaaaaaa
ctaagtgatatctttggagatgaggggatgtttcagtctgtgatgacactttgccgtgca
ctggctcagtatttgctgttactctcaaaactgcctgctggtctccgtgttcctcctgac
aaagaggatgatatcctgaaattcatagtgatgtcagtggaggcactatcttggcattta
atgcatgaccggattccattaagtgtagatcttgaagctgctctggattgttgctgtctg
acattacagcagcctaatctctggaatctgctggcttctgcagctaatgtgacatatgcc
tgctccttaattaattgtgttagatttatcatagaagcagttgctgttgagcctggtaat
caacttcttagtcctgaaagaaagaagaatacttcaaaaggcttgagtgaaggtgaagct
gattcaagtacaccgaaagctaagcacattactgcagcttgtgaaatggtagctgagatg
gtggagtgcttacagactgtcttggcactggggcacaaaagaaatgccagcatcccagcg
ttccttactcctgtcctgaagaatatcatcatcagtttggcaaggctgcctctagtgaac
agttacacaagagtgcctcccttggtctggaaattaggctggtcaccaaagcctgcaggt
gactttggcacagttttccctgaaatcccagtagaatttctgcaggaaaaagaaatcttt
aaggagttcatctatcgtattaatacccttggatggatcagccgtactcagtttgaagaa
acttgggctactttgcttggagtgcttgtaactcaacccattgtaatggaccaagaggag
aaccaacaggaggaagatacagaaaggacccaaataaatgttcttgcagtccaagccata
acctccttggtgctgagtgcaatgacaatacctgtcgcaggcaatccagcagtcagttgt
ttggaacagcagccccgcaacaaagctttaaaagctctggacacaaggtttgggaggaag
ctaagtgttatcaggggaattgttgaacaggaaatccaagcaatagtatcaaagagagat
aatattgctactcaccacttgtaccaagcgtgggaccctgttccctcactttctcctgct
actacaggtgctctgatcagccatgaaaagcttttactgcagatcaatactgaaagagaa
ataggagatatggattataaactggggcaggtctctatacactccatatggttaggaaat
aatatcactcccttgagagaagaggagtggggtgaagatgaagaagatgagaatgacaca
cctgctccttcctcaccaccaacctctcctgttaacaccaggaaacaccgtgctggtgta
gatatccattcttgttctcagttcttgctggagctgtacagtcagtggatattgccatca
aaccccagcaagaggacaccagtcatcctgatcagcgaggtggtgcgatcgcttctggca
gtttcagacttatttacagaaaggaatcagtttgagatgatgtacacaaccctgacagaa
ctgcgaaaggtgcatccatcagaagatgagattcttgtgcagtatttgataccagccact
tgtaaagctgctgctgtccttggaatggataaagctgtggctgagcctgtgagtcgactg
ctggagtcaaccctaagaagcactcacatgccaagtcggattggagctctgcatggaatt
ctttatatcctggagtgtgacttacttgatgagacagcaaagcaactcatcccaataatc
agcgagtatctgctctccaatctgagaggagtagcacactgtgtgaatatccataaccaa
cagcacattttggtcatgtgtgcaactgccttctacttgattgagaattacccacttgat
gtgggacctgaattctctgcaggaatcatacagatgtgtggagtcatggtgtctggaagt
gatgaatcaactccatccattatttatcactgtgtcctgagaggcttagaaagacttctt
ctttcagagcagctttccaggctggatagtgaatccttggttaaactgagtgttgacaga
gtgaatgtgcagagcccccaccgagcgatggcagcccttgggttaatgctgacttgcatg
tacacaggaaaggaaaaagtcagccccagtcgtactgcagatgcaaatcctgctgctcct
gacagtgagtctgtgattgtggccatggaaagagtgtctgtcctttttgataggatcagg
aagggatttccttttgaagctagagtagtggctcgaatccttccacagttccttgatgac
tttttcccccctcaagatgtgatgaataaagttattggagaatttttatccaaccagcag
ccttacccccagtttatggcaacagttgtttataaggtattccagacactgcacagcact
gggcagtcctcaatggtccgtgactgggtgatgctgtccctctccaatttcacacaaaga
acacctgtggcaatggccatgtggagtctatcctgtttttttgtcagtgcttccaccagc
caatggatttcagcaattcttccacatattatcagcagaatggggaaatcagagcaggtg
gatgttaacatcttctgtctggtggccatcgacttctaccgccatcagatcgatgaggag
ctggaccggagggccttccagtctgtgtttgaggtggtggcatccccaggaaccccctac
catcgtttattaacttgcttgcagaatgtccacaaggtcacagcatgctga
DBGET
integrated database retrieval system
