Pogoniulus pusillus (red-fronted tinkerbird): 135179654
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Entry
135179654 CDS
T10504
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03020
RNA polymerase
Brite
Enzymes [BR:
ppus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135179654 (POLR1A)
Transcription machinery [BR:
ppus03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
135179654 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135179654
NCBI-ProteinID:
XP_064007772
LinkDB
All DBs
Position
11:34287160..34331087
Genome browser
AA seq
1705 aa
AA seq
DB search
MKPPKVVPWRRLFGVSFGMYTAEEIRKLSVKQITNAQYLDSVGNPAANGLYDLALGPPHS
REVCATCMQNFSNCPGHFGHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCTRAVVHLL
LSQLKVLEKGLLHAVHDLEVVLNRFLEQCADATSSEIEEELNHHVQEILESHQLREQCSN
VKNVCECRNKLIAEFWKTHMSSKKCPHCKSRRSLVRKEHNSKLTVTYPSAVYSQAGEKGL
DEPAALDDSQLGKRGYLTPITAKQYIVALWKNEGFFLCYLFPGMDPQKNSAFTPDMFFLD
LLVVPPSRYRPVNRLGERLFTNGQTVNLLAVLKEAKLIQKLLLFMAKEQCQPLKLPEEVQ
TEAGEKDEALDRSILTAIPGQSLADKLYNTWIRLQSYVNIVFDSDMDRLATEKYPGIRQL
LEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKEL
RQAVINGPKAHPGASMVINEDGSRTVLSATSLTQREAIAKQLLTPSSGAPQSGLKIVCRH
IRNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQS
ELGRAEAYTLAFTDEQYLVPKDGKPLPGLIQDHMISGVSMTIRGCCFTREQYMELVYRGL
TDKTGRIKTFPPAILKPQRLWTGKQVVSTLLINIIPENHVPLNLTGKAKIGGRAWVKGLA
TRCLNLDSMCESQVVIRNGELLCGVLDKAHFGSSAYGLVHCCYELYGGATSGKVLTCLGR
LFTAYLQLYRGFTMGIEDILVQPEADEKRQKIIERSRQGGVRAVRAALNLPETASCEEVQ
GKWQDAHLCKDQRDFNMVDLKFKEEVNNYNNEVNKVCMPHGLHRRFPENNLQLMVQSGAK
GSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKPSE
FFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDG
LDIPKTQFLQPEQFPFIADNYEVIQKANRLDEALARMESHHANQQFKAIKKWQARHQSSV
QREGGFLMFSQKKLAGVKAQTAGGEIRNGRDPATLQVLQMWYDLDEKKRRKYLKKAAKCP
DPSLGVWRPDTHFASVSETFEKGVADYISKWESESRRSCVHPALPADRLKDLLYLKWQRS
LCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILLVAGANIKTPT
MSVPVFNTKKALKKVKQLKKQLTRVCLAEVLQKVEIEESLRVKCKQNRHRLCKVRFQFLP
HEHYREEKCVKPRQILHFMETRFFKLFLEAIKKKSAKMESFTAVSARKAIHKDLDSDQDK
VQNDQEAAAEEEENIVDAEADEGDGDATEAKQRKKQEEEVDYESDEEKGEENRDENLEDE
DADSEKEEEPPGSEDQNGAADESQHLSFVSQTKRERSHLAQSAQLRVNAVLDSHPSIQDY
SFDTENELWCEVSLALPLLKVYFDLSSLLLSLARSAVIHEVKGITRCLLNEGTTPDGGKE
LLLHTEGINLAELFRYSDILDLNRLYCNDIHAMAKNYGIESALRVIVKEIKDVFAVYGIV
VDPRHLSLVADYMCFEGFYKALNRIGIQSNSSPLQQMTFETSYKFLKEATMMGAHDELRS
PSACLVVGKVVKGGTGLFDLKQPLR
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccccgaaagtggtgccgtggcggcgactgttcggtgtctcctttgggatgtac
acagccgaggagatcaggaagctgagtgtaaaacagatcaccaatgctcagtacttggac
agtgtggggaatccagctgctaacggcctctatgacttggctttgggccctccgcactcc
agggaagtgtgtgcaacctgcatgcagaacttcagcaactgccctgggcattttggccac
atagaactgcctctgactgtctacaatcctctgttctttgataaactgtaccttctgatc
cgaggctcttgtttgaactgccacatgctgacctgtactcgagctgtggttcacctcctg
ctgagccagctgaaggttctggagaagggcttgcttcacgctgtccatgatctagaagtc
gttctgaacaggtttttagagcaatgtgcagatgcaacaagctcggaaattgaagaggag
ttaaatcaccacgttcaagaaatcttggagagccatcagctgagggagcagtgctcaaat
gtcaaaaatgtttgtgagtgtaggaataaactgatagcagagttctggaaaacacacatg
agttcaaagaaatgcccccactgcaagtccaggaggtccttggtgcggaaggagcataac
agcaagctgactgtgacctacccctcagcagtgtactcccaggcaggggagaaaggcctg
gatgagcctgcagctcttgatgacagccagctagggaagagagggtacctgacacccatc
actgccaagcaatacattgtggctctgtggaagaatgaaggtttctttttgtgttatctc
ttccctgggatggatccccagaagaattcagcattcactccagacatgttttttttagat
ctgcttgtggttccaccttcaaggtaccgccctgtgaaccgcctgggggagcggctcttc
accaacggccagactgtcaaccttctggcggtgctgaaggaggccaagctgatacagaag
ctgctgctcttcatggctaaagagcagtgccagccactgaaactcccagaggaagtgcag
acagaggcaggagagaaggatgaagctctggaccgttccatcctgacagcgattccaggg
cagagccttgcagataagctgtacaacacctggattcgtcttcagagctatgtcaacatt
gtattcgacagcgacatggacagactggcgacagagaagtatcctggcattcgtcagctg
ctggagaagaaggaagggctgttccgcaagcacatgatgggcaagcgcgtggacttcgct
gcccgctccgtcatctgccccgacatgtacattggcaccaacgagattggcatccctatg
gtatttgctaccaaactgacttacccccagccagtcaccccctggaatgtcaaagagctg
aggcaggctgtcatcaacggccccaaggctcaccctggggcctccatggtcatcaatgaa
gatggatctcgtacagtgctgagcgcaaccagcctgacccagagggaagccatagctaag
cagctcctcactccttcctcaggtgctccccagtcaggcctgaagattgtgtgtcgccac
atccggaacggggacgtgctgctgctgaaccggcagcccaccctgcacaggccttccatc
caggcccaccgcgcccgcatcctgcctggggagaaggtgctgaggctgcactatgccaac
tgcaaggcctacaacgctgacttcgacggtgacgagatgaatgcccacttcccacaaagt
gagctgggcagagcagaagcctacaccttggccttcaccgatgagcagtatctggtgcca
aaggatgggaagccacttcctggcttgattcaggaccacatgatttctggggtcagcatg
actatccggggctgctgcttcaccagggagcagtacatggagctggtttacagaggactg
acagacaagacaggaagaatcaagacctttcctccagcaatcttgaaaccacagcgctta
tggacaggcaagcaggttgtttctacattgttaataaacatcattccagaaaaccacgtc
ccactgaatttaactggaaaagcaaagattgggggaagagcttgggtaaagggacttgca
accaggtgtctgaatctggactccatgtgtgaatctcaggtagttattagaaatggggag
ttgctgtgcggagtcttggacaaagctcactttggcagctctgcctatggcctggtccac
tgctgctatgaactgtacgggggcgccaccagtgggaaagtgctgacctgcctgggcagg
cttttcactgcctacctgcagctctacaggggctttacaatggggattgaagatatcttg
gttcagcctgaagcagatgagaaaagacaaaaaatcattgagaggtcacggcagggcggg
gttagggctgttagagctgctcttaatttgccagaaacagcatcgtgcgaggaggtgcag
gggaagtggcaggatgcccatctctgcaaagaccagagggacttcaacatggttgatctg
aagttcaaggaggaagtgaacaattacaacaatgaagttaacaaggtttgcatgccacat
ggtctccacaggaggtttccagagaacaatttgcagctgatggtgcagtcgggagccaaa
ggatccactgtgaacacaatgcagatctcttgtttgctgggccagatcgagttggaaggc
cgcagacccccgctgatggcatctggcaaatcgctaccctgcttccagccctatgatttc
tcccctagctcaggagggtttgtgactggcagattcctcactggcatcaaaccttctgaa
ttcttcttccactgcatggctggcagagaaggtcttgtggatacagctgtcaaaaccagc
cggtctggctacctgcagaggtgtatcatcaagcatttggaaggactggtggttcaatat
gacctgactgtgcgagacagtgatggcagcgtggtgcagtttctgtatggagaggatggg
cttgacatccctaaaacccaattcctgcagcctgaacagttccccttcattgcagacaac
tatgaggtaatccagaaggcaaaccgtctggatgaagctttggcaaggatggagtctcac
catgccaaccagcagttcaaagccatcaaaaagtggcaagccaggcaccaaagctctgtg
caaagagaaggaggcttcctcatgttttcgcagaagaagctggcaggtgtgaaagcacag
actgcaggaggggagatcaggaatgggagagacccagcgaccttacaggtactgcagatg
tggtatgacctggatgagaagaagcgaaggaagtacctgaagaaggcagccaagtgtcct
gatcccagcctcggggtttggcgtccagacactcactttgcatctgtgtcagagaccttt
gagaagggagttgcagattacatcagcaagtgggaatctgagagcagacgaagctgtgtg
cacccagcactgcctgcagacaggttgaaggacttgctgtatttgaagtggcagcgatct
ctttgtgacccaggagaagctgtggggcttcttgcagctcagagtattggggagccttcc
acacagatgactctgaacacctttcattttgctggcagaggtgaaatgaatgtcacattg
ggtatcccaaggctgagggaaatactgctggtggctggggccaatatcaaaacaccaacc
atgagtgtgccggtattcaataccaagaaagctctcaagaaggtgaagcagctcaagaaa
cagctcaccagggtgtgcttagctgaggtcttgcagaaagtggagatcgaggaatcgctg
cgcgtgaagtgcaagcagaacagacatcggctctgcaaagtcaggttccagttcctgccc
catgagcactaccgggaggagaagtgtgtgaagcccagacagatcttgcacttcatggag
acgaggttctttaaattgtttctggaggcaattaaaaagaagagtgcaaagatggaatct
tttactgcagtcagtgctcggaaggcaattcacaaagacctagacagtgaccaagacaag
gtacagaacgatcaggaagctgcagcagaggaagaggagaacattgttgatgcagaagct
gatgaaggggatggtgatgctacagaagccaaacagaggaagaagcaggaagaggaggtg
gattatgagagtgatgaagagaagggagaagaaaacagggatgagaacctggaagatgaa
gatgctgactcagaaaaagaagaggagcctcctggttctgaagatcagaatggagcagct
gatgagtctcagcacctgtcctttgtgtctcagactaaaagagagagaagccacttagct
cagtctgcacagctgcgagtgaatgctgttttggacagccacccatccatacaggactac
agctttgacactgagaatgagctgtggtgtgaggtgtcgctggcattgccgctgctgaag
gtgtactttgacctgagctcactgctgctgtccctggcgcgcagcgcggtcatccacgag
gtgaagggcatcacccgctgcctgctcaacgagggcaccaccccggacggagggaaggag
ctccttcttcacacagagggcataaacctggcagagctcttcagatactctgatattcta
gacctgaacagactctactgcaatgacatccacgccatggctaagaactatgggatcgag
tctgccctgagagtgattgtaaaggaaataaaagatgtgtttgctgtatatggcatcgtg
gtggatcctcggcatctctccctggtggcagactacatgtgctttgaaggcttctataaa
gcactcaaccgcattggcatccagtctaactcctcccctctgcaacagatgacatttgaa
accagctacaaattcctgaaggaggcaacaatgatgggtgcccatgatgagctgagatcc
ccttctgcttgcctggtggttggaaaagttgttaagggaggcactggcttgtttgacctg
aagcagcctctgaggtag
DBGET
integrated database retrieval system
