Pogoniulus pusillus (red-fronted tinkerbird): 135179962
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Entry
135179962 CDS
T10504
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
135179962 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppus04121
]
135179962 (RAG1)
Enzymes [BR:
ppus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135179962 (RAG1)
Ubiquitin system [BR:
ppus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135179962 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_ZnC2
RAG1_pre-RNase_H
RAG1
RAG1_DNA-bd
zf-RAG1
zf-C3HC4
zf-RING_6
zf-C3HC4_2
zf-RING_UBOX
zf-RING_10
TasA_anchor
Motif
Other DBs
NCBI-GeneID:
135179962
NCBI-ProteinID:
XP_064008214
LinkDB
All DBs
Position
1:complement(52553781..52556894)
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AA seq
1037 aa
AA seq
DB search
MSVALQMELPEEIQHPYSKFSDWKFKLFKVRSLKKTPSDDSQQLNKEQTEEATSSNKETR
LHENEALPRGEEVDFGSDGHAPEKDAKDTKIQGEEAHQDNLKQLCRICGVSFKTDCHKRT
HPVHGPVDDETLLLLRKKERKATSWPDLIAKVFKIDVRGDIDTIHPTRFCHNCWSIIHRK
FSNSLSEVYFPRNSTMEWQPHSPDCQVCHAAGRGGKRKGQPPSVQHGKRPKTAAECALPN
RGGKNQAQMKNKNVMKELVNCKNIHLSTRLLAVDYPLDFIKSISCQICDHILADPVETTC
RHLFCRTCILKCVKALGSYCPSCWYPCFPTDLVTPVKSFMNVLDSLSIKCPVKECDEEIS
HGKYGQHLSSHKQMKDRELYSYINKGGRPRQHLLSLTRRAQKHRLRELKGQVKAFAEKEE
GGDMRAVCMTLFLLALRAKNEHKQADELEAIMQGKGCGLHPAVCLAIRVNTFLSCSQYHK
MYRTVKAVSGRQIFQPLHALRAAEKALLPGYHPFEWKPPLENVSANTDVGILDGLSGLPV
SVDDYPVDTIAKRFRYDVALVCALKDMEEEILEGMKAKNLDDYLSGPFTVVVKESCDGMG
DVSEKHGSGPAVPEKAVRFSFTVMNIAVEQGNESKRIFEEVKPNSELCCKPLCLMLADES
DHETLTAILSPLIAEREAMKNSQLLLEMGGILRTFKFVFRGTGYDEKLVREVEGLEASGS
TYICTLCDATRLEASQNLVFHSITRSHTENLERYEIWRSNPYQESVDELRARVKGVSAKP
FIETVPSIDALHCDIGNAAEFYRIFQMEIGEVYKNPDVSKEERKRWQLTLDKHLRKKMNL
KPMMRMSGNFARKLMSRETVEAVCELIKCEERHKALKELMDLYLKMKPVWRSSSPAKECP
ELLCQYSYNSQRFAELLATKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEGNES
GNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHKTLKSQGFTTDPKESLG
GTLPLEEVLESNNPEEI
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtagccttgcaaatggagctgcctgaagaaattcagcatccgtattccaaattt
tcagactggaaattcaagctgtttaaagtgaggtcactcaaaaagacaccttctgacgac
agccagcaactgaacaaagaacagaccgaagaggccacttcttcaaacaaagagaccaga
ctgcatgagaatgaagcactgccaagaggagaagaggtggactttgggagcgatgggcat
gcacccgagaaggatgccaaggacacaaaaatacaaggtgaagaagctcatcaagacaac
ctgaagcagctctgccgcatctgtggagtctccttcaaaactgattgccacaagaggact
cacccagtccatgggccagtggatgatgaaactctattgcttctgagaaagaaagagaga
aaagcaacttcttggccagaccttattgctaaggtgtttaagattgatgtgcgcggagac
attgataccatccaccccacccgattctgccacaactgctggagcatcatccacaggaaa
ttcagtaacagcctgtctgaagtctattttcctaggaacagcacgatggagtggcagcct
cactctccagactgccaggtgtgccacgctgctggccgtgggggcaagagaaaaggccag
ccacccagtgtacagcacggcaaacgccccaagactgctgcagaatgcgctctacccaac
agaggtggaaagaaccaagcacagatgaagaacaaaaatgtcatgaaagaacttgtcaat
tgcaaaaacattcacctcagcaccaggctgctcgcggtcgattacccactggatttcatt
aaatccatctcttgccagatctgtgaccatattttggcagacccagtggaaaccacatgc
agacacttgttctgcaggacttgcattcttaaatgtgtcaaggctctgggcagctactgc
ccttcctgctggtatccttgcttccctactgacctggtgaccccagtgaaatccttcatg
aatgtcctcgacagcctgagtataaagtgccctgtaaaggaatgcgatgaagagatctca
catggaaaatatggccaacacctctccagccacaagcagatgaaagacagagagctctac
agctacataaataaaggtggccgaccaaggcagcatctcctgtctttgaccaggagagct
cagaaacatcgtctgagggagctgaaaggccaggtcaaggcttttgctgagaaagaagag
ggaggtgacatgagggctgtgtgcatgactctgttcctgctagctttaagagcaaaaaat
gaacacaaacaagcagatgaactggaggctataatgcaggggaaaggatgtgggcttcac
cctgctgtctgcctggccatccgagtcaacacattcctcagctgcagccagtatcacaaa
atgtacagaacggtgaaagccgtcagcgggagacagatcttccagcccctgcacgctctg
cgcgccgccgagaaggccttgctgccaggatatcatcccttcgagtggaagcctcccttg
gaaaacgtgtctgctaacacggatgtgggcattctggatgggctctcagggctgccagtc
tcagttgacgactacccagtggatacaattgcaaagaggtttcgatatgatgtggccttg
gtttgtgccttaaaggacatggaggaggagatcctggaaggtatgaaagcaaaaaacctg
gatgactatttgagtggtcccttcaccgtggtggtaaaggagtcctgtgatgggatggga
gatgtcagtgagaagcatgggagtgggcctgctgtgccagagaaggctgttcgcttctct
ttcacggtcatgaacatcgctgtagagcaagggaacgaaagcaagaggatctttgaagaa
gtaaagcccaactcagagttgtgctgcaagcccttgtgcctcatgctggctgacgaatcg
gatcacgaaactctgacggcaatcctgagccccctcatagcagaaagagaggctatgaag
aacagccaactgctgcttgaaatgggaggcatcttgagaacgttcaaatttgtcttcagg
ggcacaggatacgatgagaaacttgtgcgagaagtggaggggctggaggcttcaggttcc
acttacatttgtaccctgtgcgatgcaacccgcttggaggcatcccagaacttggtcttc
cactccatcaccaggagccacactgaaaatctggagcgctatgagatctggaggtccaac
ccataccaggagtctgtcgacgagctccgcgcgagggtgaagggtgtttcagccaagcct
ttcattgagactgtgccctccatagatgccctgcactgcgacatcggcaacgcggccgaa
ttctacaggattttccagatggagatcggggaagtgtacaagaatcccgatgtgtctaaa
gaggagaggaagaggtggcagctgactcttgacaagcacctcaggaagaagatgaacttg
aagcccatgatgaggatgagtggcaatttcgctcgaaaactcatgtccagagagacagtc
gaggcggtgtgtgagctaatcaagtgtgaggaaaggcacaaagccctgaaggagctgatg
gacctctacctgaagatgaagcctgtgtggcgatcctcgagcccggccaaagagtgccca
gagctgctgtgccagtacagctacaactcgcagcgtttcgctgagctcctcgccacaaag
ttcaagtacaggtatgagggcaagattaccaactacttccacaaaaccctggcccacgtc
cctgaaatcatcgaaagagatgggtccattggggcctgggccagtgaagggaacgagtct
gggaacaaactgttcaggaggttccgcaaaatgaatgccaggcagtccaaatgctacgag
atggaggatgtcttgaagcaccactggctctacacctccaagtacctacagaagttcatg
aatgctcacaaaacattaaaaagccagggcttcaccaccgacccaaaggagagcttaggt
ggcaccctgcctctggaggaggtcttggaaagcaacaatccggaggaaatctaa
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