Pogoniulus pusillus (red-fronted tinkerbird): 135180112
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Entry
135180112 CDS
T10504
Symbol
APP
Name
(RefSeq) amyloid-beta precursor protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135180112 (APP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppus01002
]
135180112 (APP)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ppus00535
]
135180112 (APP)
00536 Glycosaminoglycan binding proteins [BR:
ppus00536
]
135180112 (APP)
Peptidases and inhibitors [BR:
ppus01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
135180112 (APP)
Proteoglycans [BR:
ppus00535
]
Cell surface proteoglycans
Others
135180112 (APP)
Glycosaminoglycan binding proteins [BR:
ppus00536
]
Heparan sulfate / Heparin
Others
135180112 (APP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
SnoaL_6
Insulin_TMD
Exonuc_VII_L
Prominin
Motif
Other DBs
NCBI-GeneID:
135180112
NCBI-ProteinID:
XP_064008419
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All DBs
Position
12:complement(13591723..13807880)
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AA seq
751 aa
AA seq
DB search
MLPHLALLLLVSGVARALEVPADGNAGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGIK
TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKKGWKQCNGHPHIVVPYRCLVG
EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKESCSEKSMNLHDYGMLLPCGIDKFR
GVEFVCCPLAEESDNLDSADAEDDDSDVWWGGADADYADGSEDKAVEEQPEEDDELTVVE
DDDADDDDDDGDEIEEETEEEYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPC
RAMISRWYFDVAEGKCAPFFYGGCGGNRNNFDSEEYCMAVCGSVIPTTAASTPDAVDKYL
ETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKV
ESLEQEAANERQQLVETHMARVEAMLNDRRRIALENYITALQTVPPRPRHVFNMLKKYVR
AEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSFLYNVPAVAEEIQ
DEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVDGEVSLDDLQ
PWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTNVKTEEISEVKMDAEFRHDS
GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVD
AAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgcacttagcgctcctgctgctggtctccggtgtggctcgagctctcgaggta
cctgctgatggaaatgctggattgctggcagaacctcaaattgcaatgttctgtgggaaa
ctcaacatgcacatgaatgtgcagaatggaaagtgggaatcagacccctctggcatcaag
acttgcatcgggacaaaggaagggattctccagtactgccaggaagtctaccctgaatta
caaataaccaatgttgttgaagccaaccagcctgttacgatccagaactggtgcaagaag
ggatggaagcagtgcaacggtcacccgcatattgtggttccctacaggtgtttggtgggt
gagtttgtgagtgatgcccttctggtaccagacaagtgcaagttccttcaccaggaaagg
atggatgtgtgtgaaactcatctgcactggcatactgttgctaaagagtcctgtagtgag
aagagtatgaatctgcatgactatggcatgctgcttccctgtggaatcgacaagttccgt
ggtgtagagttcgtttgctgcccgttagcagaggaaagtgacaaccttgattcagctgat
gctgaggatgatgattcagatgtctggtggggaggtgcagatgcagactatgcagatgga
agtgaggataaggccgttgaagagcaaccagaggaagacgatgaactaactgttgtggaa
gatgatgatgctgatgatgacgatgatgatggtgatgaaattgaagaagagacagaggaa
gaatatgaggaggcaactgaaagaactaccagtattgcaaccactaccaccacaactaca
gagtctgtggaagaagttgtcagagaggtgtgctctgagcaagccgagaccgggccctgc
cgcgcgatgatctcccgctggtactttgacgtggccgaaggaaagtgcgcacccttcttt
tacggtggctgtggcggcaaccggaacaactttgactcggaggagtactgcatggcggtc
tgtggcagtgtcatccctaccacagctgctagtactcctgatgctgttgacaaatacttg
gagactcctggggatgaaaatgaacatgcccatttccagaaagccaaggagagacttgaa
gctaagcatcgtgaaaggatgtctcaggtcatgagagagtgggaagaggcagaacgccaa
gcaaagaacctgccgaaggctgacaagaaggctgttatccagcatttccaggagaaagta
gaatcactggaacaagaagcagcaaatgaaagacaacagctggtggagactcacatggca
cgagtggaagccatgctgaatgaccgtcgtcgcattgctttggagaactatatcacagcc
ctgcagactgtcccacccaggcctcgtcatgtgttcaacatgctgaagaagtacgtgcgt
gccgagcagaaagacagacagcatactctcaaacactttgaacacgtccgtatggtcgac
ccaaagaaagctgcccaaatcagatctcaggttatgacacatctacgtgtgatatatgaa
cgcatgaaccagtctctctccttcctctacaatgtgcctgctgtagcagaggagatccag
gatgaagtcgatgaattacttcagaaagagcaaaactactctgatgatgttttggccaat
atgatcagtgaacccagaatcagctatggaaatgacgctctcatgccttcactgacggaa
actaagaccacagtagaacttctccctgtagatggagaggtcagcctagatgaccttcag
ccatggcatccctttggtgttgattctgttccagccaatactgaaaatgaagttgaacca
gtggatgcccgtccagctgcagacagaggactcaccacacgaccaggttctgggttgacc
aacgttaaaacagaagagatatctgaagtgaagatggatgcggagttccgacatgactca
ggatatgaagttcatcatcaaaagctggtgttctttgctgaagatgtgggttcaaataaa
ggtgccatcattggactaatggtgggaggtgttgtcatagcaacagttattgtcattact
ttggtgatgctgaagaaaaagcagtatacatctattcatcatggagttgtggaggtggat
gctgcagtgacaccagaggagcgccacctttccaagatgcaacaaaatggctatgaaaat
cccacctacaagttctttgaacagatgcagaactag
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