KEGG   Pogoniulus pusillus (red-fronted tinkerbird): 135180227
Entry
135180227         CDS       T10504                                 
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
ppus  Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135180227 (U2AF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ppus03041]
    135180227 (U2AF1)
Spliceosome [BR:ppus03041]
 Complex A
  U2 snRNP components
   U2 related factors
    135180227 (U2AF1)
 Complex B
    135180227 (U2AF1)
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4
Other DBs
NCBI-GeneID: 135180227
NCBI-ProteinID: XP_064008681
LinkDB
Position
12:complement(21147574..21164412)
AA seq 313 aa
MIECITILTVLVSANTASMKFLYWSLYSKSKQTSPENVEIGGSIGNSVVRYFFYFRIEFR
KDKSTVHFTSKLELVVMETDVLGCTTNQHLARKRCCCKLACSRDQPVLTFRQLDFKKNGT
NTILIQNIYRNPQNSAQTADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCD
NLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGEC
TRGGFCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGRERD
RRRSRDRERSGRF
NT seq 942 nt   +upstreamnt  +downstreamnt
atgatagaatgcattaccattttaacagtgttagtaagtgccaatacagcgagcatgaag
ttcctgtactggtctttgtattcaaaaagcaagcagacctctccagaaaatgtggaaatt
ggaggcagtattggaaattctgtagttaggtatttcttttatttcaggatagagttcaga
aaagacaagtcaactgttcattttacttcaaaattggagcttgtcgtcatggagacagat
gttctcggttgcacaacaaaccaacatttagccaggaagcgatgctgttgtaagcttgcc
tgtagtagagaccaaccagtgctaactttcagacaacttgattttaagaagaacggtaca
aataccatcttgattcaaaacatctatcgtaacccccaaaacagtgcacagacggctgac
ggctcacactgtgctgtgagtgatgttgagatgcaggaacattacgatgaattctttgag
gaggtcttcacagaaatggaagaaaaatatggtgaagttgaggagatgaacgtctgtgat
aaccttggagatcatctagttggaaatgtatacgtaaagtttcggcgtgaagaagatgca
gaaaaggctgtgattgacctgaacaatcgctggtttaatggacagcccattcatgctgag
ctttcacctgtgaccgatttcagagaggcctgttgtcgtcagtatgaaatgggagagtgt
acacgaggaggtttctgcaactttatgcatttgaagcctatttctcgagagttgagacgt
gagttgtatggacgtcgccgtaaaaagcatcgatccaggtcgaggtcccgtgaacgtcgg
tctagatccagagatcgtggtcgtggaggtggtggtggcggaggaggacgcgaacgtgat
aggaggcgatcaagagatcgtgaaagatctggtcgattctga

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