Pogoniulus pusillus (red-fronted tinkerbird): 135180227
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Entry
135180227 CDS
T10504
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135180227 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppus03041
]
135180227 (U2AF1)
Spliceosome [BR:
ppus03041
]
Complex A
U2 snRNP components
U2 related factors
135180227 (U2AF1)
Complex B
135180227 (U2AF1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
135180227
NCBI-ProteinID:
XP_064008681
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All DBs
Position
12:complement(21147574..21164412)
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AA seq
313 aa
AA seq
DB search
MIECITILTVLVSANTASMKFLYWSLYSKSKQTSPENVEIGGSIGNSVVRYFFYFRIEFR
KDKSTVHFTSKLELVVMETDVLGCTTNQHLARKRCCCKLACSRDQPVLTFRQLDFKKNGT
NTILIQNIYRNPQNSAQTADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCD
NLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGEC
TRGGFCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGRERD
RRRSRDRERSGRF
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatagaatgcattaccattttaacagtgttagtaagtgccaatacagcgagcatgaag
ttcctgtactggtctttgtattcaaaaagcaagcagacctctccagaaaatgtggaaatt
ggaggcagtattggaaattctgtagttaggtatttcttttatttcaggatagagttcaga
aaagacaagtcaactgttcattttacttcaaaattggagcttgtcgtcatggagacagat
gttctcggttgcacaacaaaccaacatttagccaggaagcgatgctgttgtaagcttgcc
tgtagtagagaccaaccagtgctaactttcagacaacttgattttaagaagaacggtaca
aataccatcttgattcaaaacatctatcgtaacccccaaaacagtgcacagacggctgac
ggctcacactgtgctgtgagtgatgttgagatgcaggaacattacgatgaattctttgag
gaggtcttcacagaaatggaagaaaaatatggtgaagttgaggagatgaacgtctgtgat
aaccttggagatcatctagttggaaatgtatacgtaaagtttcggcgtgaagaagatgca
gaaaaggctgtgattgacctgaacaatcgctggtttaatggacagcccattcatgctgag
ctttcacctgtgaccgatttcagagaggcctgttgtcgtcagtatgaaatgggagagtgt
acacgaggaggtttctgcaactttatgcatttgaagcctatttctcgagagttgagacgt
gagttgtatggacgtcgccgtaaaaagcatcgatccaggtcgaggtcccgtgaacgtcgg
tctagatccagagatcgtggtcgtggaggtggtggtggcggaggaggacgcgaacgtgat
aggaggcgatcaagagatcgtgaaagatctggtcgattctga
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