KEGG   Pogoniulus pusillus (red-fronted tinkerbird): 135180418
Entry
135180418         CDS       T10504                                 
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
ppus  Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04382  Cornified envelope formation
ppus04510  Focal adhesion
ppus04512  ECM-receptor interaction
ppus04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ppus00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    135180418 (COL4A4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    135180418 (COL4A4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    135180418 (COL4A4)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    135180418 (COL4A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppus04147]
    135180418 (COL4A4)
   00536 Glycosaminoglycan binding proteins [BR:ppus00536]
    135180418 (COL4A4)
Exosome [BR:ppus04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   135180418 (COL4A4)
Glycosaminoglycan binding proteins [BR:ppus00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   135180418 (COL4A4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 135180418
NCBI-ProteinID: XP_064008874
LinkDB
Position
13:complement(4588415..4681762)
AA seq 1678 aa
MALTKDSFEWIKWLITAAWWLMVVLSGKEADGGGYAYLEPCGGQDCSVCRCFPEKGSRGQ
PGELGAQGPIGSLGSTGPAGLPGEKGPRGENGQPGPAGEKGDKGPTGVPGFPGLDGVPGL
PGSEGPRGKHGPDGCNGSRGDPGFPGENGYVGPRGPYGNPGQKGEKGNSVYVSYFGRGPP
GDRGDPGPPGMPGPRGSRGIRGPSGYPGQPGLPGIPGYPGLPGEQGNPGVGVDGQKGEPG
DTGLPGPPGTPLLVGPPGAQLFKGEKGQKGLPGVTGQRGPRGPKGTLGRGEKGEKGIPGF
PGLQGNPGSYGPDGYPGMKGEAGFAGFPGQPGYPGIQGDPGEEGPPGPPGAVGTPLLPIK
GPQGDPGFPGPAGDMGSVGPIGPAGLLGRPGHDGTSLPGLPGVSGAPGPQGFPGDPGFPG
TGEPIPGRPGYPGPPGLPGQPGRQGLPGLPSVICTERGLPGGPGAQGQTGLPGRKGAKGE
KGNQGLCSCTAGPPGPRGVQGPPGTPGKKGQMGYPGRHGEKGDPGLSGVIGSPGHPGIPG
SAGQHGEKGEKGDPGRVRIKGIKGERGPAGAPGFPGQRGNDGRDGELGLPGEKGNEGDSG
VSLLGDKGFPGVPGLPGIKGQPGLPGLGFPGPPGIRGSPGDVGDTGSVGPPGPKGQKGET
VCITSPYPGSPGPPGFKGVQGSKGLKGLPGRPGLNGFDGQKGHQGRPGAGIPGSEGFRGA
GGDPGDEGERGSTIDGRHGRPGPPGIDGQKGVPGDTTYGPPGIPGKRGLPGPPGAQGARG
DLGVPGFQGQPGTPGFPGPKGFRGPEGDIGAPGCPGFPGPPCDTGIPGPPGLRGVVGLPG
PQGLPGFKGQRGERGLDGPPGVKGLKGFPGSQGSPGPPGSRGLTGLPGNRGPLGFPGQTG
NKGIQGPQGFPGLPGTQGQMGIPGVKGEEGKMGPPGPSGECGDMGLKGERGSPGDTGYVN
IRLEKGQKGEPGLPGENGFRGERGEKGSTGFRGTPGFPGKNGVPGVPGDHGDTGVMGFPG
VQGFPGPKGYRGITGFQGQPGDQGDVGLPGIPGNPGLTGPKGSKGRRGDPTPLLGAYGCK
GPPGDPGLPGLCGFPGEKGSPGIQGQPGIPGPKGDPGYPGVPGLPGATGPQGLPGEPGEK
GRHGILGAPGLQGLAGPQGRKGLPGLPGLDGLDGLKGQRGSAGAPGQSETGPPGYPGELG
PKGDRGEPGWPGISIPGPPGEQGFPGFPGRRGPAGPSGPRGRCPDSASPGPPGDQGPPGL
DGIRGHPGNPGPPGQTIFVRGDPGDPGFPGAPGNPGQPGQQGARGLPGNQGREGPKGPMG
IHGPQGPPGATGQHGDQGFQGKPGPRGPTGDPGEPGKTDDSCPAIPGPPGEAGQRGEDGS
VGIPGPIGHPGPQGQKGEEGSRGLPGQDGLPGAPGPPGDQGNRGEQGYTGPQGPPGQTGI
PGPPGPHIRSASGFLLVLHSQSDREPLCPQGMPKLWTGYSLLYLEGQEKAHNQDLGLAGS
CLPMFNTMPFAYCNINQVCYYASRNDKSYWLSSAAPLPTAPLSEEEIEPYISRCAVCEAP
AQAVAVHSQDQSIPPCPSNWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSAPFI
ECQGQRGTCQFFANEYSFWLTTVLPELQFASAPRPGTLKEGQEQRRKISRCQVCLKHG
NT seq 5037 nt   +upstreamnt  +downstreamnt
atggcgttaacaaaggattcatttgaatggattaagtggcttatcacagctgcctggtgg
ctgatggttgttttatcaggcaaagaagctgatgggggaggatatgcataccttgagcca
tgtgggggacaggactgttcagtttgtcggtgctttccagaaaaaggatcaagaggtcag
cctggtgagctgggagctcaaggtccaattgggtccttgggatctacaggaccagctggt
ctaccaggggaaaaaggaccgagaggtgagaatgggcagcctgggccagctggagaaaaa
ggtgataagggcccaactggagtccccggatttcctggcctagatggtgttcctgggtta
ccaggaagtgaaggacccagaggcaagcatggtccagatggctgcaatggctcaagagga
gatccaggatttccaggcgaaaatggttatgttggaccgagaggtccttatggtaatcca
gggcaaaaaggagaaaaaggaaattcagtctatgtttcatattttggaagaggacctcca
ggagacagaggtgatcctggcccccctggcatgcctggacctagagggtcaagaggtata
aggggcccatctggatacccaggccaaccaggcttgcctggtattccagggtaccctggc
ttaccaggtgaacagggaaatccaggtgttggagtggatggacaaaaaggagagccgggc
gacactggacttcctgggccacctgggacaccgctgttagttggacctcctggagctcag
ctgttcaaaggggaaaagggccaaaaaggactacctggggtgacaggacagagagggcca
cgtggacccaaagggacacttgggagaggggagaagggtgaaaaaggcattcctggattc
cctggattgcagggtaatcctggctcttatggacctgatggttatcctggaatgaagggg
gaagcaggatttgctggctttcctggacaacctggctacccaggcatacagggggatcca
ggagaagaagggcccccaggtcctcctggagctgttggaactccactgcttcctatcaaa
ggtccacaaggagatcctggatttccaggtcctgctggtgatatggggtcagttggacca
atcggtcctgcaggcctgctgggaagaccaggacacgatggaacaagtctgcctggccta
ccaggagtgagtggggcaccaggacctcaaggttttccaggtgaccctggtttccctgga
acaggtgaaccaatcccaggaagacctggatatcctggaccaccaggtttaccaggacag
ccaggaagacaaggactacctggactacccagtgtaatctgtaccgagagagggctccct
ggaggacctggagcacagggtcagacaggccttccaggaagaaaaggtgccaaaggagaa
aagggaaatcaaggcctctgctcatgcactgctggtcctcctggtccccgtggtgtgcaa
ggacctccaggtactccaggaaagaaaggacaaatgggataccctggaagacatggagaa
aagggtgacccaggcttatctggtgtaattggatctccagggcatcctgggatacctggt
tctgctggacaacatggtgaaaaaggagagaagggtgatccaggaagagttagaataaaa
ggaataaaaggagaaagaggtcctgctggggctccaggattcccaggccaaagaggtaat
gatggcagagatggagaactaggattgcctggggaaaaaggaaatgagggtgactctgga
gtatcactgctgggtgataaaggatttcctggagtcccaggacttcctgggataaaagga
cagccaggattgcctggtttgggatttcctggccctccaggcatcagaggtagtcccgga
gatgttggtgatacaggtagtgttggaccacctggtccaaagggccagaaaggtgagact
gtctgcattacttcaccataccctggaagtccaggtcccccaggatttaaaggtgttcaa
ggatcaaagggtttaaagggcctccctggtcgtcctggactaaatgggtttgatgggcaa
aaaggccatcaaggcaggccaggagcaggaatccctgggtcagaaggctttcgaggtgca
ggtggtgatcctggtgatgaaggtgaaagaggctctacaattgatggtagacatggtcgt
ccaggtccacctggcatagatggtcagaaaggtgttccaggtgataccacatatggtcct
ccaggaatcccaggcaagaggggactgccaggaccccctggtgcacaaggagccagaggt
gatctaggtgttcctgggtttcaaggacaacctggtaccccaggatttccaggtcccaaa
ggcttcagaggcccagaaggtgatataggagcaccaggctgtccaggattccctggtcca
ccatgtgacacaggcataccagggccaccaggactcagaggtgtcgtgggcctgccagga
cctcaaggtttaccaggctttaaaggtcaaagaggagagaggggcctagatgggccacct
ggagtcaaaggtctcaaaggctttcctggctcccaaggttccccaggtcctccaggctcc
cgaggacttacaggactcccaggcaatagaggtccacttggtttcccagggcaaacagga
aacaaaggaattcaaggaccccaaggattcccaggactcccaggaacacaaggccaaatg
ggaatccctggtgtaaaaggtgaagaaggaaaaatgggtccacctgggcctagtggagaa
tgtggggatatgggattaaaaggtgaaagagggtctccaggagacactggctatgtgaac
attcgccttgagaaaggacagaagggggaaccagggctgcctggtgagaatggatttaga
ggtgaaagaggtgaaaaaggcagcactggtttcagaggcaccccagggtttccagggaag
aatggtgtcccaggagtgccaggtgaccacggtgacactggagtgatggggtttcctgga
gtccagggtttcccaggaccaaaaggctatagaggaattacaggctttcaaggacaacca
ggtgaccagggtgacgttggcttgcctggaatccctggaaacccaggactgaccggccca
aaagggtctaaaggcaggagaggtgacccaactcctctgcttggtgcatatggttgcaaa
ggacctcccggagatccaggactaccaggactctgtggattcccaggagaaaaaggctca
ccaggtatccaaggacaacccggaataccaggacccaagggcgaccctggatacccagga
gtacctggactcccaggagctacaggccctcaaggattgccaggagaacctggagaaaag
gggaggcatggaattttgggagctccaggattgcaaggattagccggaccccagggcaga
aaaggtcttcctggactgcctggattggatggcttggatggactaaaaggtcaaagaggt
tctgcaggagctccaggtcaaagtgagacagggcctccaggatacccgggagaacttgga
ccaaagggagacagaggtgaacctggatggcctggcatttcgattccaggcccccctgga
gaacagggattcccaggattcccaggtagaagaggcccagctggacccagtggacctagg
ggaagatgtcctgatagtgcttctcctggccctcctggtgatcaaggaccacctggtttg
gatggaatcagaggtcatcctgggaaccctggtcctcctggacagactatctttgtgcga
ggagatcctggagatcctggttttccaggggcaccaggcaatcctgggcagccagggcag
caaggagccagaggccttccagggaaccaaggaagagaaggcccaaagggtcctatggga
atccatggcccacaggggccacctggtgctacaggacaacatggagaccaaggttttcaa
ggaaaacctggtcccagaggtcccacaggtgaccctggtgaaccaggaaaaacagatgat
tcctgccctgcaatcccagggcctcctggggaggcagggcaaagaggagaagatggctct
gtaggaataccagggccaataggccaccctgggccccaaggacaaaaaggggaagaaggg
tcacgtggcctgccaggccaggatggcttaccaggggcacctgggccaccaggtgaccaa
gggaacagaggagagcaaggatacaccgggccgcaaggtcctcctggccagactggtatc
ccaggaccaccaggcccccacattagatctgcaagtggcttcttgcttgtccttcacagt
cagtcggacagagaaccgctatgtccacaggggatgcccaaattatggactggctacagt
ctgctgtacctggaaggacaagagaaagctcataatcaagatcttggcttggcaggctct
tgtctccccatgttcaataccatgccctttgcttactgcaacatcaaccaagtctgttac
tacgccagccggaacgacaagtcttactggctgtccagcgctgcccctttgcccacggca
ccgctctcagaagaggagatcgagccctacatcagcaggtgtgccgtgtgtgaggcccca
gcgcaggcagtggcagtgcacagccaggaccagtccattcccccctgccccagcaactgg
agaagcctctggataggatattcctttctgatgcacaccggctctggtgatcagggtggt
gggcagtccctaatgtcacctggaagctgcctagaagacttcagatcagctccattcatc
gaatgccagggccagcgggggacgtgccagttttttgctaacgaatacagcttctggcta
acgaccgtgctgcccgagctgcagtttgcatcagcccccagaccagggactctcaaggaa
ggccaagaacagaggagaaagatcagtaggtgccaggtatgcctgaagcacggctag

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