KEGG   Pogoniulus pusillus (red-fronted tinkerbird): 135180419
Entry
135180419         CDS       T10504                                 
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
  KO
K06237  collagen type IV alpha
Organism
ppus  Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04382  Cornified envelope formation
ppus04510  Focal adhesion
ppus04512  ECM-receptor interaction
ppus04518  Integrin signaling
ppus04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ppus00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    135180419 (COL4A3)
   04518 Integrin signaling
    135180419 (COL4A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    135180419 (COL4A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    135180419 (COL4A3)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    135180419 (COL4A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppus04147]
    135180419 (COL4A3)
   00536 Glycosaminoglycan binding proteins [BR:ppus00536]
    135180419 (COL4A3)
Exosome [BR:ppus04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   135180419 (COL4A3)
Glycosaminoglycan binding proteins [BR:ppus00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   135180419 (COL4A3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 135180419
NCBI-ProteinID: XP_064008875
LinkDB
Position
13:4681519..4783144
AA seq 1674 aa
MASGGCPGRPVPLLPLLLLLALLWPGRATAAESCVCKVKSPCFCHGMKGSKGEKGFPGIP
GPPGHQGFPGPEGPPGPQGPKGSPGLRGLAGPKGIRGAPGIPGFSGPPGLPGQPGSVGPP
GRLGVPGCNGTKGDQGFPGPPGRRGAPGVPGIAGIKGEKGCPADGYSQGYGVKGDPGLPG
MPGLQGAPGAQGYPGEHGPQGPPGPSGMPGKAGPPGPKGLMGLKVIGSKGRKGDTGLTGP
PGPPGTVIVTLSGPDNITDLKGEKGEKGSRGLPGPMGFTGPVGDSQSEKGDRGEPGTPGK
PGKEGAPGPPGLPGQKGEQGKPGLAGRQGAKGMKGNIGPPGARGRTEYYDSVVGEKGDEG
LPGPPGPKGRRGLPGPQGPPGVAGRPGVSRPGLRGPPGFPGPKGTKGEKGRTGVCIVGPP
GLPGVTGRPGSVGLPGPPGEPGRVTFRTGPPGLPGEPGCMGPPGHPGDVGVKGDEAHVCT
DCTYIPGIPGLPGAPGPHGRDGVPGREGTTGPKGSPGSPGAPGFPGVQGPPGFRGEQGHK
GAKGEPGYVYPEGPKGERGDPGSRGDRGRKGSSGFLGRPGSKGSKGSKGEEGLAGSKGDR
GLPGLPGSLGLPGEMGLPGLPGYGPQGIRGFKGSKGIPGLPGLPGEAGLKGDTSRITPLP
ALPGPQGPHGLPGPPGVPGRVGARGPPGDSGHPGPTGDRGFPGLGFPGNPGPKGDKGLPG
GRGSPGCEGKTGDPGRAGNLGQPGEKGDPGVVIPGEQGRMGPPGGHGIPGSKGDIGFPGL
PGIPGHAGRDGDVGLRGDRGSPGVPGDPGFPGKPAECLIGLPGLPGVQGATGPAGGRGLP
GSKGKQGLPGMSIPGISGEPGEPGLIGLQGNTGLPGPKGQSGRPGITGVPGPRGEPGVMG
LLGIPGPPGTMGRPGYPGLTGSSGFPGIKGRKGFLGAKGEPGDKGFPGPSETLVGIGNKG
EQGLKGVQGTVGPRGAKGDCGLQGSPGGDGPDGIPGLPGVKGFMGLPGIPGGQGFPGAPG
SKGDMGMPGPKGQKGSPGFPGLPGDPGTPGYRGFPGDKGDRGHPSAGPPGEPGPKGDPGP
PGVVGSKGEKGSQGHPGHTGVPGAHGMRGESGSAGIPGMLGPPGDMGAKGQQGRPGRQGI
PGPPGAVGAPGKTGLVGARGSQGRDGMPGPPGGKGEPGAPGRGIPGLRGIPGRKGIKGNM
GLPGFPGPPGVKGHQGDRGPIGPPGLVGLPGFQGATGMAITGPKGNRGVAGADGRPGAPG
FPGPPGVSIPSIKGSKGDRGADGIPGPRGPPGDVGPPGPKGTEGRSGYPGARGHPGFLGF
PGVKGEKGNQGPPGPQGAEGPRGPKGQHGPPGVPGRIFSLPGHKGPPGLPGIPGTPGDQG
IQGIPGLQGPKGIKGLPGSFGHPGRPGLPGPKGDRGFPGQRGHPGLIGFPGLQGLPGSPG
PIAAGPTRRGFIFTRHSQSTKIPSCPGGTSPIYAGYSLLFVQGNERAHGQDLGAAGSCLQ
RFTTMPFLFCSTNDICSFASRNDYSYWLSTATLISADMAPISGRALEPHISRCVVCEGAA
MVIAVHSQSTVVPPCPDGWISLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRAIPFIE
CHGRGTCNYYTNSYSFWLASLNPRRMFRRPLPQTLKAELENIISRCQVCMKRPV
NT seq 5025 nt   +upstreamnt  +downstreamnt
atggccagtgggggctgccctggccgtccagtgccgctgctgccgctgctgctgctgctc
gccctactctggccgggccgcgccacagcagcggagagctgtgtgtgcaaagttaaaagt
ccctgcttctgccatggcatgaaagggagtaagggtgaaaaaggctttccaggtattcca
ggtccacctggtcatcaaggctttcctggtccagaagggcctccagggccacagggccca
aagggctctccagggcttaggggcttagctggacccaagggtatacgaggagccccagga
atacctggattttcaggtccccctggccttccagggcagccaggaagtgtcggtcctcct
gggcgcttgggtgttccgggatgcaacggcacgaagggtgatcaaggatttccaggtcct
cctggcagaagaggtgctccaggtgtcccaggtattgctggcatcaaaggagagaagggg
tgccctgcagatggatatagccaagggtatggtgtaaaaggtgaccccggattgccagga
atgcctggacttcagggtgccccaggtgctcaaggatatcctggggaacatggaccacag
ggccctccaggaccttcaggcatgccagggaaagcaggacctcctggacctaagggtctt
atgggcctgaaggtcatagggagcaaaggaagaaagggtgacactgggttaactggcccc
ccaggacccccaggaaccgttattgtgaccctgagtggaccagacaacatcacggacttg
aaaggagagaaaggagaaaaaggatcaagaggacttccaggaccaatggggtttacaggg
ccagttggtgattctcaaagtgaaaagggggaccgaggagaacctggaacaccgggaaaa
cctggaaaagaaggtgccccaggtcctcctggcttaccaggacagaaaggtgaacagggc
aagccaggactggctggcaggcaaggagctaaggggatgaaaggaaacattggtccacct
ggagctcgcggtcgaacggagtattacgacagtgtggttggtgaaaaaggagatgaagga
ctccctggacctccaggaccaaaaggtcgtcgtggcttgcctgggccacagggtcctcct
ggagttgctggtagaccaggtgtgtcaagacctggtctgagaggtcccccaggatttcct
gggccaaaaggaactaaaggagagaaaggacgaactggagtatgtattgtgggccctcca
ggactacctggtgttactggcagacctggttctgttggattaccaggtcctccaggagaa
ccaggtagagtaacatttagaacaggcccaccaggacttccaggagagccagggtgtatg
ggacctccaggacatccaggagatgttggtgtgaaaggtgacgaagctcacgtgtgtact
gactgcacctacatcccgggaattcctggccttcctggtgctcctgggccacatggtcgg
gatggtgtgcctggtagagaaggaacaacaggtccaaaaggttctccaggttctccagga
gcaccaggctttccaggagttcaaggacctccaggttttagaggagagcaaggacataaa
ggagcaaaaggtgaaccaggatatgtgtatccagaagggccaaaaggtgagcgaggagat
ccagggtccaggggagacagaggaagaaaaggctcaagtggatttctgggaagacctggc
tctaaaggatccaagggctctaaaggtgaagaggggctggctggttcaaaaggagataga
ggactacctggcttgcctggcagtcttggtcttcctggagagatggggctccctggactg
ccaggatatggaccacaaggcataagaggtttcaaaggctctaaaggaattcctggtctg
cctggattacctggagaagctggtctgaaaggagacaccagtaggataactccattacct
gcattaccaggacctcaaggaccacatggtttacctggacccccaggagtgccaggcagg
gttggtgcaagaggtcctccaggtgattcaggacatccagggccaacaggtgacagaggc
tttccagggcttggctttcctggaaacccaggtccaaaaggagataaaggacttccagga
ggtagaggctcaccaggttgtgaaggaaagactggagatccaggccgagctggaaacctg
ggacaaccaggagaaaagggtgaccctggtgtggttattcctggagagcaaggtagaatg
ggtccaccaggaggtcatggcattcctggctcaaaaggtgatattggatttccaggactt
ccaggcataccaggacatgctggacgtgatggtgatgttggcttaagaggagatcgtggc
tcccctggagttcctggagatccaggttttccagggaaacctgctgaatgccttattggc
ctgccaggtttgccaggtgttcagggagctacaggtccagcaggaggaagaggtttacca
ggttcaaaaggaaaacaaggccttcctggcatgagtatcccaggaatctctggagagcct
ggggaacctggattaataggtcttcagggaaatacaggattacctggtccaaagggacag
tctggaaggccaggaatcactggtgtcccaggcccaaggggagaaccaggtgtaatgggc
ctgttgggaattcctgggccccctggcacgatgggaagaccaggctacccgggtctcaca
ggttcttctggcttcccaggaataaagggaagaaaagggtttcttggagcaaaaggtgaa
ccaggtgataaaggttttcctggaccatctgagaccttggttggtattgggaataaagga
gaacaaggcttaaaaggagttcaaggtacagtgggtccaagaggagcaaaaggagattgt
ggtctgcaaggttccccaggtggtgatgggccagacggaatacctggcctgccaggtgtc
aaaggatttatgggccttccagggattcctggaggacaaggattcccaggtgcaccagga
agcaaaggggacatgggaatgccaggtcccaaaggacagaaaggatctccaggctttcca
ggactgccaggtgaccctggtacaccaggctacagaggctttccaggtgacaaaggagat
cgtgggcatccatctgctgggcctccaggagaacctggtccaaagggagatccaggcccc
ccaggagttgtgggcagcaaaggagaaaaaggatcccaaggtcatccagggcatacagga
gtaccaggagcgcatgggatgagaggggaatctggaagtgcaggaattccggggatgctt
ggacctcctggagatatgggtgccaaaggacaacaaggccgcccaggacgacagggcatt
ccaggccctcctggtgctgtcggagcccctggcaaaactggacttgttggtgcaagaggc
agtcaaggccgagacggcatgcctggtcccccgggaggaaagggagaaccaggagcacca
ggcagagggatacctggccttcgtggcattcctggtcgtaaaggaatcaaagggaacatg
ggactgcctgggtttcctgggcccccaggtgtgaaaggtcatcagggtgatcgaggaccc
attggacctcctggcttagtggggttacctggatttcaaggtgcaacaggcatggcaatt
actggcccaaaaggaaacagaggtgttgctggtgcagatggaagaccaggtgctcctggt
tttccagggcctcctggtgtttccattcccagcattaaaggaagcaaaggtgacagaggg
gcagatggcataccagggccaagaggcccacctggtgatgttggtcctcctggtccaaag
ggaacagaaggtcgatcaggttaccccggtgctagaggacatcccggatttcttggattc
ccaggtgtaaaaggagaaaagggtaatcagggacctcctggaccacagggtgcagaagga
ccacggggacccaagggccagcatggtccacctggagtccctgggagaatattctctctt
ccaggccacaagggtcctcctggattgccaggaatccctgggacaccaggtgatcaagga
attcaagggatccctggactacaaggacctaaaggaataaaaggtctaccaggaagtttt
ggtcatccaggtcgaccaggactgcctggtccaaaaggagacagaggatttccaggacaa
agaggacaccctggactgattggctttccagggctgcagggcttgcctggctcaccaggt
cctatcgctgcgggtcccacacgaagaggttttatctttacccggcacagtcaatcaaca
aagatcccttcctgccccggtggcacttcacccatctatgctggctactcactgcttttc
gtgcaaggcaacgagcgagcacatggacaagaccttggagcagctggcagctgcttgcag
agattcaccaccatgccattcttgttctgtagcaccaatgacatctgtagctttgcttct
cgcaatgactattcgtattggctgtcaactgcaacactaatttcagcagacatggcaccc
atttctggcagggcactagagccccacataagcaggtgtgttgtctgtgaaggagctgca
atggtcatagcagttcacagccagtcaactgtagttcctccatgcccagatggctggata
tctctctggaaaggtttttcttttgttatgtacacaagcgccggctcagaagcttctggc
caagcactggcatctcctgggtcttgtctggaagaatttcgagccatcccattcatagag
tgccatggcagggggacctgcaactactacacaaactcctacagcttctggttggcatca
ctcaatccaagaagaatgttcaggagacctctgccacaaacattgaaagcagaactagaa
aacatcatcagccgttgccaggtctgcatgaagagaccagtctaa

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