Pogoniulus pusillus (red-fronted tinkerbird): 135180529
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Entry
135180529 CDS
T10504
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
135180529 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ppus01001
]
135180529 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ppus04054
]
135180529 (CIITA)
Enzymes [BR:
ppus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
135180529 (CIITA)
Protein kinases [BR:
ppus01001
]
Serine/threonine kinases: Other
TAF1 family
135180529 (CIITA)
Pattern recognition receptors [BR:
ppus04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
135180529 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
LRR_9
NB-ARC
nSTAND_NTPase5
NPHP3_N
RsgA_GTPase
AAA_22
AAA_16
PH_37
Motif
Other DBs
NCBI-GeneID:
135180529
NCBI-ProteinID:
XP_064009080
LinkDB
All DBs
Position
13:complement(12020406..12043807)
Genome browser
AA seq
1108 aa
AA seq
DB search
MNSASTPESGYLDLLHSDVDPFHLYTLFDLKSSGNEESDFPADPEVDASNCDQFNNMDFL
CTMENGENGDESYLCSNTVEAYARIAELAEYVLKDHQEKQVEDAFAGNLILDEMAAENTE
KFTDTKMQNCQKRTFLASAESCSGASEPKYRKTVEVPEVSAGNGSFLAMPLSSHTTSSTS
LTSHHMSFFAPATKALERSFVFPGMYVPIIPDCLLVGMKGNQENTSFAGPPQQILNMVLG
NGTSDVIIYPVLTSTKTLISPSFPVSLYGLDLFKEVRAPAPVISLEVPFKKPKPVEAFCT
SLMDYFRDVCKSVAMEHEVTLNHLFIDGTLVQSQTETKTGKNSVKAMEKDLVTCSLQGKE
RAVLKRSQLFQIPGGKDLDTEVIVVLGKAGMGKSILIQKICQDWSNGEFSQFKFVFWFDC
KQLSLPEKLYSLKDLLLGFFVKPQEGSKEIFEYILQNPDKVLLVFDGFEELHDHEIFSRC
SGSQPEKDFCSIKELLSGLIQKKILRGCTLLLTARPKDKVYQCVSKVDKTIEIVGFSPQQ
RELFITKYFQGLPYSSKALKLIKESEYLFSHCYSPVMCRFVCLLCEKVLEMGNQSLPSTL
TTVFLKFVQQKIIPVQTDVTAAQNQESLAALARVAWDLEEKHQSVMKTDLPSKEVKEFAL
KYGFFLPFTFPQRSNSEEEEFGSTFSDFVIQNFLVALHIMLAEDIKDESITKYLSFSSKK
KKTHNCLDLVPRFLAGLLFLQDDPSFCSFSKKGVKHSTKKQKIFLNYARRLQINRLCPES
LLELLHCVYETQSNYLLQHVALRLKPELSFLGVVLTPPDVHVLHFVLKSSRKEFSLDLQN
SSIDMQGLKDLVGLKNVASFRASLSDTVRLWNSLKQTKDYEMLRASTEKFVLDPFKAKTM
KDISDLSELVEMQETVINCVQDASGCSSYEIPAIKNLRKLEFALGPVCGHQGFLKLVEIL
AAFPSLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNKITDVGAEKLATALP
SLSSLKTLSLYNNSICDFGAENLAKVLPEMASLRVLDVQYNKITGVGAQQLTDSLRKCPH
IKNLVMWNPTIPYGMLEHLQQLDSRISV
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagcatccacacctgaaagtggctatcttgatttgctgcacagtgatgttgat
ccattccatctatacactctctttgatcttaagtcgtctggaaatgaggaaagtgacttc
cctgcagaccctgaagttgatgccagcaactgtgatcagttcaataatatggatttcctg
tgtacaatggaaaatggtgaaaatggggatgaatcatatctctgttccaatactgtagaa
gcttatgctagaatagctgaattagcagaatatgtgctcaaagatcatcaggagaagcag
gtggaagatgctttcgcaggaaatcttattctggatgaaatggctgctgaaaacactgag
aaatttactgacacaaagatgcagaactgtcagaaacgaaccttcttagcctctgcagag
agttgctctggtgcttcagaacccaaatacagaaaaactgtggaagtccctgaagtgtct
gcaggaaatggcagtttcttagctatgcctctcagtagccatacaactagctccacctca
cttactagccaccacatgtcctttttcgctcctgctactaaagcactggaaagaagtttt
gtatttcctggtatgtatgtacctataattccagactgtctacttgttggcatgaaaggg
aaccaagagaatacaagttttgcaggtcctcctcagcagatactgaacatggttcttgga
aatggcacatctgatgttataatatatccagtgctgacgtccacgaaaacactgatatcc
ccaagttttccagttagtttatatggtttagacctgttcaaagaagtccgagctcctgct
cctgtaatttctcttgaagtacccttcaaaaaaccgaagccagtggaagctttctgtaca
tcacttatggattacttccgagatgtgtgcaaatctgtggccatggagcatgaagtaact
cttaatcatctgttcattgatggaacacttgttcaaagccaaactgaaaccaagactggg
aagaatagtgtaaaagcaatggaaaaggatctggtaacttgtagtttgcaagggaaggaa
agggcagtccttaaaagaagccaactatttcaaatcccaggaggtaaagacttagacact
gaagtgattgtggtgctgggaaaagcaggaatgggcaaaagcattcttattcagaagatc
tgccaggactggtccaatggagagttttctcaatttaaatttgtattttggtttgactgc
aaacaactaagcttgcctgagaagctatacagcctaaaggatctccttcttggttttttt
gtaaaacctcaagagggaagcaaagagatctttgagtatatattgcaaaatcctgataaa
gtccttctggtttttgatggctttgaagagttacatgatcatgagattttttctcgttgc
tcaggcagccagcctgaaaaagacttctgcagtataaaggagctgctttcaggactcatc
caaaaaaagatacttcgtggctgtactttattacttacagcaagaccgaaagacaaggtg
taccaatgtgtgtccaaagtggataagactattgaaatagtggggttttcccctcagcag
agagaactgttcataaccaaatacttccaaggcttgccctacagcagtaaagcactgaaa
ttaatcaaagaatctgagtacttgttcagtcattgttacagccctgttatgtgtagattt
gtttgtttgctctgtgagaaagtacttgaaatgggaaaccaaagccttccttcaactctt
actacagtcttcctgaagtttgttcagcaaaagatcatacctgtgcaaacagatgttaca
gctgcgcaaaatcaagagagtctagctgcactagcccgtgtagcctgggatctggaagaa
aagcaccaaagtgtcatgaaaactgatcttccttctaaggaagttaaagagtttgctctg
aaatatggatttttcctgccatttacctttccccagcgttctaatagtgaagaagaggaa
ttcgggagcacattctctgattttgtcattcagaatttcttggttgcacttcacattatg
ttagcagaagacatcaaagatgaaagtataacaaagtacctttccttttcatccaagaag
aaaaaaactcataactgtttagatctagtgcctcgatttttggctgggttgttgttcctc
caggatgaccccagcttttgctccttctcaaaaaagggtgtaaaacattcaaccaagaaa
cagaaaatattcttgaactatgctagaaggctgcagatcaacaggctctgtccagagagt
ttacttgagcttttacactgtgtttatgaaacacagagcaattatcttttgcagcatgtg
gccttaaggctcaagccagagctgtcttttttgggtgtagttcttaccccacctgatgtc
catgtactgcactttgttttgaaaagctcaagaaaagagttttccttggatctgcaaaac
agcagcatcgacatgcaagggctaaaagacttggttggcctaaagaatgtggcatcgttc
agggcctccctcagcgatacagtcaggctctggaactctttaaagcagacaaaagactac
gaaatgctgagagcatcaacagagaaatttgtccttgatccctttaaggcaaagacaatg
aaggacatcagtgacctttcagaacttgtagagatgcaggagacagtgatcaactgtgtg
caagatgcatctggttgcagcagctatgaaattcctgctatcaaaaacctcagaaaacta
gaatttgcgctaggtccagtatgtggccatcaaggattcctaaaacttgtggaaatcctt
gcagcatttccatcacttcagcatttagaccttgatgcactcagtgaaaatggcatagga
gatgagggagcaaagagtctatcagaagtctttccaaccctgacatcactggaaacatta
aacttatcacagaacaagataacagatgtgggagcagagaaactagctacagctcttcct
tccttgtcttcattaaagacactaagcttatacaataatagcatttgtgattttggagca
gaaaatcttgcaaaagttctccctgagatggcatctttaagagtgctggatgttcagtat
aacaaaataactggtgttggagctcagcagctgactgacagtttacgaaaatgtccccat
ataaagaacttggtgatgtggaatcccaccattccttatggcatgcttgaacaccttcag
cagctggattctaggatcagtgtgtag
DBGET
integrated database retrieval system
