Pogoniulus pusillus (red-fronted tinkerbird): 135180906
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Entry
135180906 CDS
T10504
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppus01002
]
135180906 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppus04121
]
135180906 (USP42)
Enzymes [BR:
ppus01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
135180906 (USP42)
Peptidases and inhibitors [BR:
ppus01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
135180906 (USP42)
Ubiquitin system [BR:
ppus04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
135180906 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
135180906
NCBI-ProteinID:
XP_064009822
LinkDB
All DBs
Position
13:30095265..30113090
Genome browser
AA seq
1328 aa
AA seq
DB search
MTIVNKPKSSNSKKSSSRQSDKSKKPRTKKMTSRTANLGRVPPAEDPNVSVDKGPGGHIY
CRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNST
LQCLTYTPPLANYMLSLEHTQSCHEEGFCMMCTMETHINQVLCCSNNAIKPTSVINGLKR
IGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKCL
NCKAVSDTYEPFLDITLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRYT
IHRASNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSGF
NCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFYIRRYDLTLGERAFYLP
APSYPRSFLGQRGANSKQAGFMGPRLPPHMMKNSSRLNGNGPLKEDPNTIGVTLKRPSSA
PPTACVQNWAIARPSIPDPSKPQKITISIHNKLPARQTVSQADCLSGAAEDEDLSKPVAS
STITNSSAAESTSNASTMSVATNISKQEVPEEIFVEPAVNGNGNPKLSSDSAAPYGAEPW
GKSEESKGLFKRNCNIVSSNGILIGKVVRTLQNSHSSSQNAEEERSQHELPKSDSLNGAI
SLDNESKENGLKLDDATCQVQPVKPSEIFFPKTNGLLETMPVRLSPVPQEILLESLTYSQ
LNSLSEEISVPGPQKSSENAALMENVVMEALFAYEESRKVPSNFSCEVENLFSQSDSETI
STKEVAESMKQADNIHPNINGQHKVRKKPSDAEEELLGQCESEDGRDKDKLRRSKEPEPL
SKENPSYIKGSPEREEKLGPTSSLKPDVECSSKTLVSLDTAEKCQDAKDVSHSYVEVPPV
NDSSITKLDKVLESQFSRDNEGLSNKKCEEDKHRKKYKKTLYDSKRTDKEHYRRKRESSD
TEEREKQGRSKPDEHSHKRRRSGSIETNKQNRPKQQEHCSESKYRASHGDRKSPNKGKSS
GKYSRYRSRSRERTEQDRSRYYHSKGDRTWSRERYYQDEPWRWDKCRYYHDYYSSYGARD
GRERKSSHSDKDFDKLSQAYNRSHKDYHCRSRWPHNTFSDGHHFSSHRANFYHCSVPQQQ
PDKYPRERHALPPGSAHASFEDSSRENEKLRNGKRKSSPSESSGSEMERKCRKVDDQRMK
KYRKKKKKSKDKHREKDYKHYDLDDSVLRFDNDSRKHKKKKKKKKHIRKPKDFLEHLDPH
FQKKRREREESCSPGGYFCEQYRNQGSNQPSNEGKFSAAGDSKKHSFIPSNQYGKDAELT
DGSLHYSS
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaactctaaaaaatcatcatcaaggcagtct
gacaaatctaagaaaccccgtacgaagaaaatgacatcccgcactgcaaatctgggacgg
gtgccacctgcagaagatccaaatgtctctgtggacaaagggcctggaggtcatatttat
tgtaggtcatctcaaaaatctaagccttttgcccaaagagatctagtggtcaatgatgga
attgccccaccacaaaggattctgtttccacctgagaaaatctgtatggactggcagcaa
acgcaaagcgtgggagttggactgcaaaacctgggcaacacctgcttccttaactctact
ctccagtgtttgacctatacccctccacttgccaattacatgctttctctcgagcacacc
cagtcatgtcacgaggaaggattttgtatgatgtgtacaatggaaactcacataaaccag
gtcctgtgttgctccaataatgccatcaaacccacatctgttatcaatggccttaaaaga
ataggaaaacatttccattttggcagtcaggaagacgcacatgaattcttatgcttcacc
gtcgatgctttgcagaaagcttgcttgaatggaagcaccaaattggacagatcttcccaa
gccaccacccttatctatcagatatttggaggctatctaagatctcgagtgaagtgctta
aactgcaaagcagtttcagatacctatgagccattccttgatattactttggatataaag
gcagttacctctgtcaccagggctctagaacaatttgtgaaaccagagcaactggatggt
gaaaacagctacaagtgcagcaagtgtaagaagatggttcctgcctcaaagaggtacacc
atacaccgtgcttccaacgttctcacaatatcactgaagaggtttgcaaatttcactggt
ggaaaaatcaacaaggatgtaaaataccctgaatatttggatctccgagcatatatgtcg
cagtcaataggagaacctctcatctatgctttgtatgcagttctggtgcatagtggtttc
aactgtaatgcaggacactatctctgcttcatcaaggctgggaatggactctggtatcga
atgaatgatgcttcagtagagctctctgatatcaagacagtgctcaaccagcaagcttac
gtacttttttatatcaggcgctacgacctgaccctcggagaacgtgcgttttacttgcca
gcaccatcctatccccgctccttcctcgggcagcggggggctaacagtaagcaggctggg
tttatgggaccacgacttcctcctcacatgatgaagaactcaagtcgtctgaatggaaat
gggcccctaaaagaggatccaaataccattggtgttaccctaaaaaggccatcttcagct
ccaccaacagcttgtgttcaaaactgggcaattgccaggccttcaattccagatccatcc
aaaccccagaagatcactatcagtattcataacaaattgcctgcacgtcagactgtgtca
caagctgactgtcttagcggtgctgcagaggatgaggacctaagcaagcctgtagcttca
tctaccattacaaattcttctgcagcagagtctacctcaaatgcatctacaatgtcagtt
gctactaacatttccaaacaggaagttcctgaggagatttttgttgagccagcagtgaat
ggaaatggaaaccctaaactcagctctgatagcgcggccccttacggtgcggaaccgtgg
ggaaaatccgaggagtcaaagggcttgttcaaaaggaattgcaacatagtatcttccaat
gggattttgattggaaaggtggtccgtacgttgcagaattcccattcttcctctcagaat
gctgaagaagagagatcccagcatgagctgccaaaaagtgattccctaaatggtgctatt
agtttagataatgaatctaaagaaaacggactgaaacttgatgatgccacttgccaagtc
caacctgttaaaccttctgagattttctttcctaaaacaaatggactgcttgaaacaatg
cctgtaaggttgtcaccggttcctcaagaaatcctcttagagtctctcacatacagccag
ttgaacagcttgtcagaggaaataagtgtccctggaccacagaaatcttctgagaatgct
gctctcatggaaaatgtggtgatggaagcactctttgcctatgaggaatccaggaaggtt
ccttccaactttagctgtgaggttgagaatcttttttctcagtcagattccgaaaccatt
tctaccaaagaagtagctgaaagtatgaaacaagctgacaacatccatcccaacatcaac
gggcagcacaaggtcaggaaaaaaccctcggacgctgaagaggagctcctcgggcagtgc
gagtcggaagatggcagagacaaagacaaactgagaagatcaaaagaacccgaacccctt
tcaaaagaaaatccctcgtacatcaaagggtctcctgaaagggaagagaagttaggacca
acttcctctctgaagcctgacgttgaatgtagttctaaaacacttgtgtcgctggatacg
gcagagaaatgccaggatgcaaaggacgtttctcatagctatgtggaggtgccacctgtg
aatgactcttccattacgaagctggataaagtgctggagagtcaattctctagagacaac
gagggactgagtaacaaaaaatgtgaagaagacaaacacagaaaaaaatacaagaaaact
ctgtatgactctaaaagaactgacaaagagcactaccggaggaagagagaaagctcagac
actgaagagagggagaagcaaggcagaagcaaaccagatgagcattcccacaagaggagg
aggtctggcagcatagaaacaaataagcagaatcgccctaagcagcaggagcattgcagc
gagagcaagtacagagcctcccatggtgacagaaagagcccaaataagggcaaaagctca
ggaaaatattctcggtatagatcccgaagcagagaaagaacagaacaagacaggagtagg
tattatcattccaaaggagacagaacttggagcagagaaagatactatcaggatgagcca
tggagatgggataaatgcaggtactaccatgattattactcctcgtatggagcaagagat
ggcagagagagaaaatcttctcattctgataaggactttgacaagctgagtcaagcttac
aacaggtcacacaaggattatcattgcagaagcaggtggcctcacaacacgttctctgac
gggcatcacttcagcagccacagagcaaacttctatcactgttcagtacctcagcagcag
cctgacaaataccctcgcgaaaggcatgcgcttccacctggctcagctcatgcgagcttc
gaggactcctcccgggaaaacgagaagctcagaaatggcaaaaggaaatccagcccctcc
gaaagcagcgggagcgagatggagaggaagtgccgcaaggtagacgaccaaagaatgaaa
aaatataggaagaagaaaaagaagtccaaagataaacatcgagagaaggattacaaacat
tatgatttggatgactctgtgctccgctttgacaatgacagtcgcaaacataagaaaaag
aagaaaaagaagaaacacatcaggaaaccaaaagacttcttggaacacttagatcctcat
ttccagaagaaaaggcgggagcgggaagaatcctgttctccagggggctatttttgtgag
caatacagaaaccagggcagtaaccagccctccaatgaagggaagttttctgctgcaggt
gacagcaagaaacacagcttcatcccatccaaccagtatggtaaagatgcagagcttact
gatggaagccttcactactccagctaa
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