Pogoniulus pusillus (red-fronted tinkerbird): 135181380
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Entry
135181380 CDS
T10504
Symbol
EXOSC4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135181380 (EXOSC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppus03019
]
135181380 (EXOSC4)
Messenger RNA biogenesis [BR:
ppus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135181380 (EXOSC4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
135181380 (EXOSC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
135181380
NCBI-ProteinID:
XP_064010573
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Position
14:20682054..20683666
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AA seq
246 aa
AA seq
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MAAAELLSDEGYRLDGRRPSELRKVRARMGVFEQADGSAYIEQGNTKALAAVYGPHELRG
SRSRALPDRALVHCQYSLAAFSTSERRRRPAHGDRQTAELALHLRQTFEAAILTQLYPRS
QIDIYVQILQADGGNYCAGVNAATLALMDAGIPMKDFVCAISAGLAADTALADLSWPEEA
AGGPQLALAVLPASGQIALLQLSARLHQQRLELALDAALAACRSLHAVLDAVVRERLRQA
SQALGD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgagctgctgtcggatgaggggtaccggctggacgggcggcggcccagc
gagctgcggaaggtgcgggcccgtatgggcgttttcgagcaggccgacgggtcggcctac
atcgagcaagggaataccaaggcgctggctgctgtctacgggccccatgagctgcggggc
tcccggagccgggcactgccggaccgggcgctggtgcactgccagtacagcctggccgcc
ttcagcaccagcgagcggcggcggcggcccgcgcacggagaccggcagacggcggagcta
gcgctgcacctccggcagacctttgaagctgccatcctgacccagctctatccccgctcc
cagatagacatctacgtgcagatcctccaagcagacggtggcaattactgcgcaggagtg
aacgcagccacgctggcactgatggacgctggcatccccatgaaggactttgtctgtgcc
atctcggccgggctggcagcagacacggcactggcagacctgagctggcccgaggaggcg
gctgggggcccgcaactggcactggcagtgctgccagcctcagggcagatcgccttgctg
cagctcagcgcccgcctgcaccagcagcggctggagctggcactggacgcggcgctggca
gcctgccggtcactacatgctgtgctggatgctgtggtgagggagcggctacgccaggcc
agccaagctctcggggactga
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integrated database retrieval system
