Pogoniulus pusillus (red-fronted tinkerbird): 135182115
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Entry
135182115 CDS
T10504
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3
KO
K06099
cold shock domain protein A
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135182115 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppus03000
]
135182115 (YBX3)
03041 Spliceosome [BR:
ppus03041
]
135182115 (YBX3)
Transcription factors [BR:
ppus03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
135182115 (YBX3)
Spliceosome [BR:
ppus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135182115 (YBX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
135182115
NCBI-ProteinID:
XP_064011989
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All DBs
Position
15:complement(25542105..25563127)
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AA seq
293 aa
AA seq
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MSEAAETSTPGSAPTAATASPAGAPASPSPAGPDAKPKSPVSAAAPSAAVGEAAPAAAAA
ASATTPTATTAAAETEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNN
PRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYFGRRRA
PPRSGVEGDMKDGVTEGGQLQQVHRNPMYRPRYRRGPPRPRPVPVPGEAENKENHHEASA
MSQQPPRRGYRRPYNYRHRPRPPSTSAQDGKETKVTETPAENPAPATEQSGAE
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcggcggagaccagcacccccggctcggcgcccaccgccgccaccgcctcc
ccggccggagcccctgcgtcgccgtctcccgccggcccggacgccaagcccaagagccct
gtcagcgccgccgcgccgagcgcggctgttggtgaggcggcccctgccgccgccgctgcc
gcctccgcaaccaccccgacagccacaaccgccgcggccgaaacggagaagaaagtgctg
gccactaaagttcttggcacagtcaagtggttcaatgtcagaaatggatatggctttatc
aacagaaatgataccaaagaagatgtgtttgtccatcagacggcgatcaagaaaaacaac
ccccgcaaatacctgcgcagtgttggtgatggagagactgtagagtttgatgtggtcgag
ggagagaagggtgcagaagcagctaacgtcactggtccagatggagtccctgtagaaggc
agccgctacgctgcagaccggcgccgctatcgacgtggctatttcggccgacgccgtgca
ccacctcgaagtggtgttgaaggagacatgaaggatggagtcacagaaggaggacagctt
caacaagtccataggaatcccatgtaccgtccccgctaccgcagggggcccccacgtcct
cggcctgtcccagtgcctggagaggctgaaaacaaggagaaccatcacgaggccagcgcc
atgagccagcagccacctcgccgtgggtaccggcgcccttacaactaccgccaccgccct
cgtccacccagcacttcagctcaggatgggaaagagacaaaggtgactgaaacacctgca
gaaaatcctgctccggcaactgagcagagtggtgctgagtaa
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