Pogoniulus pusillus (red-fronted tinkerbird): 135182261
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Entry
135182261 CDS
T10504
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
135182261 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppus03036
]
135182261 (MBD4)
03400 DNA repair and recombination proteins [BR:
ppus03400
]
135182261 (MBD4)
Chromosome and associated proteins [BR:
ppus03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
135182261 (MBD4)
DNA repair and recombination proteins [BR:
ppus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
135182261 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
135182261
NCBI-ProteinID:
XP_064012190
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All DBs
Position
16:504838..509845
Genome browser
AA seq
502 aa
AA seq
DB search
MAASGAAARGLPGGSRDEAAAERPGPSPRGGGTGAAAERSLAKRLSAAAAAAGPSAVPSG
WQKVSRRRQSGRTAGRIDVYFVSPEGHKLRSKSALVEYLRQRGETRLKAEDFVFAAPAQR
SPRGRGKRCSRKVAGTVAGGEDCHSQVTVLSMQNGAEETTGKEPQEEAALGSEALTTKGL
NPEECWKAPKKTGERSDQSTRSGKSSGERSSADSRTKRQREAWSRQEAKDAGSKEPCRRR
AWRAAPCRGTATARPAPVGAALPTLSRARAGIQLDSATACPHGTLGSPAEKSVEEGPNDA
SSAEPEKTPGLETGRERDGGNSGQSMPRTQVDRRKTSPYFSSKCSKEAPSPPRRKALRKW
IPPRSPFNLVQETLFHDPWKLLIATIFLNKTSGKMAIPVLWEFLKKYPSPQVARAADWRE
MAELLKPLGLYELRAKTIIRFSGEYLSKRWRYPIELHGIGKYGNDSYRIFCVNEWQEVQP
QDHKLNVYHTWLSENRERLSIG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcgggagcggctgcccgaggcctaccgggtggcagccgagacgaagcggcg
gcggagcggcccggccccagccctagaggcgggggcaccggcgctgcggcggagaggagc
ctggcaaaacggctgtcggcggcggcggcagcggccgggcccagcgccgtccccagcggc
tggcagaaggtgtcgaggcggcggcagtcgggcaggacggcagggaggatcgatgtctat
tttgtgagccctgaaggacacaagctgaggtcgaaaagtgcacttgtggagtacttgcgg
caaagaggggagacgaggctaaaagcagaagattttgtctttgcagccccagctcagagg
agtccccgagggagggggaagagatgcagcagaaaagttgcaggaactgttgcagggggt
gaggactgtcacagccaggtgacagtcctcagcatgcagaacggtgctgaggagacaact
ggaaaggagccccaggaagaggctgctcttgggagcgaagctttgaccaccaaaggctta
aacccagaggagtgttggaaagccccaaaaaagacaggggaaagaagtgatcagagcacg
aggagtggcaagagctctggagagaggagttcagctgacagccggaccaaaaggcagaga
gaagcgtggagcaggcaggaggccaaggatgctggaagcaaggagccgtgcaggaggaga
gcctggcgtgcggccccctgccggggcacagccactgcacgccctgcacctgtgggggca
gctctgccaacactcagcagggcacgggcaggcatacagctggactctgccacggcttgc
ccacacgggacactgggcagcccagcagagaagtctgtggaggagggtcctaacgatgca
tcttctgcagaacctgagaagacccctggactggaaacagggagagagagggatggaggg
aactcagggcagtccatgccacggacacaagtggacaggaggaaaacgagtccctatttt
tcaagtaaatgcagtaaagaagctcccagcccacccagaaggaaggccctcaggaaatgg
attcctccacgttctccttttaacttggtccaagaaacacttttccatgatccgtggaag
cttctcattgcaaccatatttctcaataaaacttcaggcaagatggcaattcctgtgctc
tgggagttcctcaagaagtatccttctccacaagtagccagggctgcagactggagagaa
atggcagagctgctcaaacctcttggcctctacgagctcagagccaaaactatcatcagg
ttctcaggtgagtacctgagcaagcgctggcgctaccccatcgagctgcatggcattggc
aagtatggcaacgactcctaccgcatcttctgtgtcaatgaatggcaggaggtgcagcca
caggaccacaagctgaacgtgtaccacacgtggctctcggagaaccgggagaggctgagc
atcggctga
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