Pogoniulus pusillus (red-fronted tinkerbird): 135182438
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Entry
135182438 CDS
T10504
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135182438 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppus03021
]
135182438 (PBRM1)
03036 Chromosome and associated proteins [BR:
ppus03036
]
135182438 (PBRM1)
Transcription machinery [BR:
ppus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135182438 (PBRM1)
Chromosome and associated proteins [BR:
ppus03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
135182438 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135182438
NCBI-ProteinID:
XP_064012612
LinkDB
All DBs
Position
16:12719906..12775973
Genome browser
AA seq
1709 aa
AA seq
DB search
MRRLAFRGAGCTLKKLDSMGSKRRRATSPSSSVSGGDFDDSHHSTNIPGPSRKRRRLSNL
PTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKL
KMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEED
EDEEGHDNQGTNSELSSPGYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYY
AIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFN
MKKAEIEHSELAKSSLRIRTPSNLTASKLTGPSSQGKGSVGDERNSSNKYYRNKRSAQGD
RLSAITMALQYGSESDEDAALAAAARYEEGESEAESITSFMDTSNPLYQLYDTVRSCRNN
QGQLISEPFFHLPSKKKYPDYYQQIKAPISLQQIRTKLKNHEYETLDQLEADLNLMFENA
KRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNIR
KQRMKILYNAVLEAREPGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDK
YAAEEAMIEDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLAEDDDVASPKL
KLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYVT
IKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLET
RREIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAIDPSFPSKPP
LTFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDEL
CKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAG
LSSLHRTYSQDCSFRNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFY
RPNETFHLATRKFLEKEVFKSDYYNKVPVNKILGKCVVMFVKEYFKLCPENFRDEDVYVC
ESRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANTDKIEEEKHAETLEDS
KVGESILHLEKEKEDVPVEMSNGEPGCHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRVGR
IEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCVVLSF
KDFLSCRPTEISENDVFLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQ
KEPSPLLEKKIQQLEAKFAELEGGDEDMEEMGEEEGDMTETPSLPQLQTPLASDLDIMPY
TPPQSAPKSVKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWR
NLEATKKAEYEERAAKVAEQQERERAAQQQNSSPRAGTPVGALVGVVPPPTPMGMLNQQL
TPVAGMISGYPPVLPPLQGPVDGIVSMGSMQPLHPGVPPPHQLPPGMPGIPGIPPPGVIG
QNVAPMVGTPAPGASPFGQQIGILGPPGQQAPPPYPGQSPASQPVMQQPTTPMFVSPPPK
TQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHT
TMADALWRLRDLMLRDTLNIRQAYNIEHV
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgaggagactggcatttcgaggtgctggttgtactctgaagaagttggattccatgggt
tccaagaggcgaagagctacctcaccttccagcagcgtcagtggaggagactttgacgac
agccaccactccacaaatataccaggcccaagcagaaagaggaggagactttccaatctc
ccaactgtagatcctattgctgtatgccatgaactttacaacactatcagagattacaaa
gatgaacagggcaggctcctttgtgagcttttcattagggcaccgaaaagaagaaaccag
ccagattattatgaagtggtttctcagccaattgatttgatgaaaatccaacaaaagcta
aagatggaggaatacgatgatgtgaacgtgctgactgctgattttcaacttctctttaac
aatgcgaaggcttactataagcctgattctccagagtataaagctgcctgcaaattatgg
gagttgtatttgcgcacaaagaatgaatttgttcaaaaaggtgatgctgaggaggaagat
gaggatgaggaaggacatgacaatcaaggcacaaattctgaattatcatctccaggttac
ctgaaggaaattcttgaacagcttcttgaagctgtagctgttgccacaaacccatcagga
cgcctcataagtgaattgtttcagaagcttccctctaaagtgcaatatccagattattat
gcaataataaaagagcctatagatcttaaaactattgcccaaaggatacagaatggaact
tataaaagcattcatgcaatggccaaggatattgatcttctggcaaagaatgccaaaacc
tacaatgagcctggatcacaagtattcaaggatgcaaatgcaattaaaaagatatttaat
atgaaaaaggctgaaattgaacacagtgagttagccaagtcaagcctccgaatcaggact
ccatcaaatttgactgcttccaagctgacaggtccctcctcacagggtaaaggcagtgtt
ggtgatgagagaaattcttctaacaaatattaccgtaacaaaagatcagcccaaggggat
cgtttatcagcaataaccatggcattgcaatatggatcagaaagtgatgaggatgcagct
ttggctgctgctgctcgttatgaagagggagaatctgaagctgagagcattacttccttt
atggacacttctaatcctctttatcagctttatgacacagttagaagttgccgaaataat
cagggccagctcatatctgaaccgtttttccacttaccctctaagaaaaagtatcctgat
tactatcagcagattaaagcacctatttcattgcagcagatcagaaccaaactgaagaac
catgaatatgaaaccttagatcagttggaggctgatctgaacttgatgtttgaaaatgcc
aagcgctacaatgttcccaattctgccatctataaaagagtactgaaaatgcagcaggtt
atgcaggcaaagaagaaggagcttgctcggagagatgatatcgaggatggggatagcatg
atttcttccgctacatctgatactggaagctcaaaaaggaaaagtaaaaagaatatacga
aagcaacgaatgaagatcttatacaatgcagttctggaagctcgagagccaggcacaggc
agacggctctgtgatctttttatggttaagccatccaaaaaggactatccagactattat
aaaattatcttggagcccatggacttgaaaatgatagaacacaacatccgcaatgataag
tacgcagcagaggaagccatgattgaagacatgaagctcatgttccgaaatgcaaggcat
tataatgaggaaggctctcaggtatacaatgatgcccatatgctggaaaagatccttaaa
gaaaaaaggaaagaactgggacccttagctgaagatgatgatgttgcatcccctaaacta
aagctaagtagaaaaagtggtatctctcctaagaaatcgaaatacatgacaccaatgcag
cagaagctgaatgaagtgtatgaagcagttaaaaattacacagataagcgaggcaggagg
ctgagtgccatcttcctgaggctgccctctcggtctgaacttcccgactattatgtaacc
ataaaaaagcccgttgacatggaaaagatcagaagccatatgatggcaaataaataccag
gacattgattccatggtagaggactttgtaatgatgttcaataatgcttgcacatataat
gagccggaatctttgatttataaagatgctctggtcctgcataaagttttgcttgaaact
cggagagaaatagaaggagatgaggattctcatgtgcccaatgtcactttgctaatacag
gaacttatccataacctttttgtatctgttatgagccaccaggacgatgagggcaggtgc
tacagcgactccttagctgagattcctgctattgatcctagcttcccaagtaaacctcct
ttgacttttgatattattcgaaaaaatgttgaaaataatcgctataggagattggacttg
ttccaggagaatatgtttgaggtcttggagagggcaaggagaatgaacaggactgattca
gagatttatgaggatgcagttgaacttcagcagttcttcattaaaattcgagatgaactt
tgtaagaatggagagattctcctttcacctgccctcagctataccaccaagcatcttcac
aatgatgtagaaaaggaaaagaaggaaaaactgcccaaagaaatagaggaggataagctc
aaaagagaagaagagaagagagaagctgaaaagagtgaagattcttctggatctgctggg
ctgtcaagcttgcaccgaacctacagccaggactgcagcttcaggaacagcatgtaccat
gtaggagattatgtatatgtggagcctgctgaagccaatttacagcctcacatagtctgt
attgagaggctgtgggaagattcagctggagagaaatggctctatggctgttggttttat
cgacctaatgaaacatttcatcttgcaacacgaaaattcttggagaaagaggtttttaaa
agtgactactacaataaagttcctgttaacaaaattttaggcaaatgtgtggtcatgttt
gttaaggaatattttaaattgtgtcctgaaaacttcagagatgaggatgtctatgtctgt
gagtcacgttattctgccaagacaaagtcttttaaaaagattaaactgtggactatgcct
gtgagctctgtgagatttgtaccacgagacgtgcccctgcctgtggtccgtgttgcttct
gtgtttgctaatacagacaaaatagaggaggagaaacacgctgaaacattggaggatagt
aaggtgggggaaagcatccttcatcttgaaaaggagaaagaagatgtcccagtagaaatg
tccaatggagagcctggttgccattactttgaacagctctgctacaatgatatgtggctt
aaggttggggattgtgtcttcataaagtcacatgggttagtgcgacctcgagtaggaagg
attgagaagatgtgggtacgagatggagctgcgtatttctttggtccaatctttatacat
cctgaagaaactgagcatgaaccgacaaaaatgttctacaagaaggaagtgtttttgagt
aacttggaggagacctgcccaatgacttgcattttggggaagtgtgtggttctgtccttc
aaagacttcctctcctgcagaccaacagaaatctctgaaaatgatgttttcctttgtgag
agccgctacaatgaaagtgacaaacaaatgaagaagtttaaagggctgaagaggttttca
ctctctgcaaaagttgtagatgacgaaatatactattttagaaaacccatagttcctcag
aaggaaccatctccactactggaaaagaagattcagcagcttgaagcaaaatttgctgag
ttggaaggaggtgatgaggacatggaagagatgggagaagaggaaggtgatatgacagaa
acaccttctctgcctcagcttcagaccccgttagctagtgatttggatataatgccttac
actccaccacagtccgctcccaagtctgttaagggcagcaccaagaaagagggatcaaag
aggaagatcaacatgagtgggtacatcttatttagcagcgagatgagggctgtgattaaa
gctcagcacccagactactcctttggagagctcagcaggcttgtaggaactgaatggaga
aacttggaagcaacaaagaaagcagaatatgaagagcgggcagctaaagttgctgagcag
caggagagagagcgagcagcacagcagcagaattcctccccccgggcaggcactcctgtc
ggggctcttgtgggggtggtgccgccaccaacaccaatgggaatgctcaatcagcagttg
acacctgttgcaggcatgataagtggctatccaccggtgctgccacctttgcagggccca
gttgatggcattgttagcatgggcagcatgcagccacttcacccaggggtgcccccaccc
caccaacttccgccaggtatgccaggcatcccaggcatcccaccacccggtgttatagga
caaaatgtggcccccatggtaggcactccagcacccggagcaagtccttttggacaacag
ataggaatccttggcccaccgggacagcaggcacctcctccgtatcctggccagagccca
gcaagtcagccagttatgcagcagcccacaactcccatgtttgtctcccctccaccaaag
acacagaggcttcttcattctgaagcctatctgaaatacattgaggggcttagtgctgaa
tcaaatagtattagcaagtgggaccagactctagcagcacgaaggcgagatgtccactta
tcaaaagagcaagagagccgactgccttcccactggctgaaaagcaaaggggctcacacc
acgatggccgacgcgctgtggcgcctgcgagacttgatgctgcgcgacaccctcaacatc
cgccaggcctacaacatcgagcacgtttag
DBGET
integrated database retrieval system
