Pogoniulus pusillus (red-fronted tinkerbird): 135182666
Help
Entry
135182666 CDS
T10504
Symbol
COL7A1
Name
(RefSeq) collagen alpha-1(VII) chain
KO
K16628
collagen type VII alpha
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135182666 (COL7A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
fn3
VWA
Kunitz_BPTI
Pur_ac_phosph_N
Interfer-bind
DUF1194
Motif
Other DBs
NCBI-GeneID:
135182666
NCBI-ProteinID:
XP_064013142
LinkDB
All DBs
Position
16:16376605..16402789
Genome browser
AA seq
2509 aa
AA seq
DB search
MGVQHLAVQNVSAQSMLLAWQPVGGATGYRLSWATLTGQDRQRVDLDAGKTSHPLEGLQP
NTNYIVTVTPLFGQLEGPTATVRQRTEAAVEQTLQTNILGPTSIQVIWTGARDARGYRLE
WKRDTGLEPPRTVSLPSSANTYQLTGLQPGTEYRITLYTLYDGREVATPVTTFQTGVEVP
VGTVSNLRLTEESGRRVRLGWTGVPGATEYKVVVRNNQDSTERTRRVPGSQTGLELSDLR
EGITYVVRVSALAGSREGSAATLTIRLKYPAVGSVSELRVTEASPSQLRVTWRGPPGAGG
YLLTWRGSDGLEQSRFLPADPTAFTIEGLRAGVVYTIGVSAIVDGRESRPVTTTGQTAPE
QVGTVSQLEVQESRSNIARVTWVGVPGATAYRVVWSRTDGGSESSRRVPGHTSSFDIPDL
EGGVSYTVKVTALIGNREGNPVSIIVTTPEAAPLPPVRSFRVTEASEHRLLLAWVPAAGS
AGYRLVWRLAEGGPQHSQQLPATTSTYDLGGLEPGRRYHISISSLAGSRQSEPATITAVT
AAAPARVTNLRVTEVRRDSVTLAWTSVPGASSYILSWSPPAAGGETRRTVPGTASSQQVS
GLRLGQSYTFTLRPFLGSVPGAETSVSERTVCRDARGDIVFLVHGTRDSSSGADAIRTLL
SNTVSSLGRLGPEGTQVALATYSYRSLPWLFLNRSSDLPAVLEQIRTMRYEEPSGNAIGA
AITFARTYLLSPNAGRRLNVPAVLVVLADGPSGDDAITAARDVKAGGVQVLAVSLEGADQ
EQLRRMVTGEDPRYIYRGGSTLAELEGELTDDLCTIISTRPEPMPKPCTVQCPRGEKGER
GEAGPQGRAGPPGLPGEPGRHGPPGPPGPPGPRTVPEDTIERPGKKGDRGFPGADGTPGS
PGRPGNPGSPGQPGTQGIPGPRGDPGPRGPTGLSGPKGEKGEPGEPGVIRDGGQGLPGRK
GEPGTVGSPGPPGSPGPRGPFGDPGPPGPLGPMGPPGPPGEFVKGEKGDRGERGPPGLVD
GAAPRGEPGLPGLPGDPGPRGPAGPPGLKGEKGDGAEGFPGLPGRPGDPGDRGPRGPPGE
QGRKGDRGAPGDLGDMGEKGDRGMPGPEGQKGEAGVPGRPGPSGREGAPGPAGPRGEKGE
HGEKGDEGTPGEAGLPGKPGDRGPRGLPGYRGPPGEKGDPGDPGLEGRNGSPGAPGSKGD
RGEPGPPGPPGRTADIGLGGAGEKGEKGDPGDPGEDGAKGARGDAGSPGVPGERGVEGPR
GPPGARGDPGDRGLPGEKGDRGPPGLDGRNGLEGKPGHPGPTGLRGDPGKQGDPGRDGLP
GLRGEQGLPGPIGPVGPPGIPGKPGDDGKPGLNGKNGEDGTPGEDGRKGDKGDTGPPGRE
GPSGAKGEQGDRGVPGPLGPPGIPGQVGPPGQGLPGVRGVPGPKGDPGEPGLQGEPGRPG
NPGARGDPGTSVNIERSLEALGIKISSLKELTGAYDGSSDSFVPLSERLRGQKGSRGEPG
ERGPPGREGSLGFPGERGPKGDKGELGAPGPQGPMGRAVGERGPEGPPGQPGEPGKPGIP
GVPGRAGELGEAGRPGEKGDRGEKGDRGEQGRDGLPGPPGPPGPKADVAEGSLMGFPGER
GPAGLKGAKGEPGADGERGPKGDKGDGGSRGERGEPGEKGRDGAPGLPGERGLAGPEGKP
GLPGFPGVLGRPGSQGDPGPPGPPGSTGPPGTQGPAGTKGEPGEPGSGVRGLPGPQGSMG
LPGPTGPPGPGGPPGVPGLPGQVGESGKPGVPGRDGVPGKDGEAGMPGKMGMPGPSGPAG
PKGEPGDVGAPGQAIAGPPGAKGEKGEPALLKDLLLGEPGSKGERGLPGPKGEKGEPGGF
GEPGDPGEDGAKGSSGAKGEKGSPGVGVQGPPGQDGPPGLKGDIGLPGPPGPPGLAGIAG
TPGQPGLRGDNGQPGPPGAPGERGMIGFPGRDGTSGPPGPAGPPGPAGIQGASGLKGDKG
APGAGLPGARGERGDPGPRGEDGRPGREGDRGPAGLPGNRGERGDKGDVGAPGPKGDKGD
TVVVEGPAGARGSKGEPGERGLKGMEGDKGDKGEQGMPGEKGVRGEQGEKGSTGFPGARG
PGGQKGEAGVSGEPGEPGQPGRDGVPGARGEKGDVGPLGMRGPKGDRGMKGACGLDGDKG
EKGEPGIPGRAGLPGRKGEPGELGLSGPPGIPGKEGLMGPKGDRGFDGQQGAKGDQGEKG
DRGAPGIVGGPGPRGIDGAPGPPGPPGSVGPRGPEGIQGQKGERGPPGQSVPGPRGVPGI
PGERGEQGSPGTQGFRGEKGEPGMREEEIRAFVRQEMSQHCACGGHFPRRLDSREHSGGW
GAQARSSLPSIQGGGRIVRQEKQHGQTGLFPAHPFPTGSAVPVLKLSHAEEEEGQDMQVM
LNTDDLDYDSEYDEEEDYDEGLEMEHLEQPAMGAEPCGLPLDEGDCQRYTLRWYYNQRVT
ECRPFVYSGCQGNLNRFDSKEECELRCGQRPGAGAHVTASGKVGAQPKV
NT seq
7530 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcagcacttggctgtccaaaatgtctcggcgcagagcatgctgctggcctgg
cagcctgtcggtggtgccactggctaccggctctcctgggcgaccctcacagggcaggac
aggcagagggtggatctggatgctgggaagacatcacatccactggaggggctgcagccc
aacaccaactacatagtgactgtgaccccactttttggacagctggagggccccacagcc
acagtacggcagaggacagaggcagctgtggagcagacgctgcagaccaacatcctgggc
cccacatccatccaggtgatctggactggtgcccgtgatgcccgtggctaccgtctggag
tggaagagagacacaggactggagccccccaggacagtgtcactccctagcagtgccaac
acctaccagttgacagggctgcagccaggcactgagtaccggatcaccctttacacgctc
tatgatggcagggaagtggccacccctgttaccaccttccagacaggtgtggaggtgccc
gtgggtaccgtgtcgaacctgcggctcactgaggagtcaggcaggcgggtgcggctgggc
tggactggtgtccctggtgccactgagtacaaagtggtggtgcgcaacaaccaagacagc
acagagaggacaaggcgtgtcccaggcagccagactgggctggagctgagtgacctccgt
gagggcatcacctacgtggtgcgtgtctcggcgctggcaggcagccgagagggcagtgct
gccacactcaccatccgcctcaagtatccagcagtgggcagtgtctcggagctgcgagtg
acagaggccagtcccagccagctgcgagtcacctggcgagggccgccaggtgctggaggc
tacctgctgacatggcgaggcagtgatggcctggagcagtcccgcttcctccctgctgac
cccactgctttcaccatcgaggggctgcgcgcaggcgtcgtctacaccattggcgtctca
gccatcgtggatggccgtgaaagcaggcctgtcaccaccacagggcagactgcacctgag
caggtggggacggtgtcccagctggaggtgcaagagtccaggagcaatattgcccgcgtc
acctgggttggtgtgccaggagccactgcctaccgcgtggtctggagccgtacagatgga
ggctcagagagcagccgtcgggttcctggccacactagctcctttgacatccctgacctg
gagggcggtgtctcctacactgtgaaggtgacggctctcataggcaaccgggagggcaac
cctgtctccatcatcgtcactaccccggaggcagccccgctgccccctgtcagaagcttc
cgtgtgacagaggcctctgagcaccgtctgctcctggcctgggtgcctgcagctggcagt
gctgggtaccgcctggtttggcgcctggctgagggagggcctcagcacagccagcagctc
ccagccaccaccagcacctatgacctgggggggctggagccgggcaggcgctatcacatc
agcatcagcagcttggctggcagccggcagagtgagccagccaccattactgctgtcact
gcagctgccccagcccgtgttaccaacctgcgtgtgacagaggtgcggagagactcagtg
acactcgcctggacctctgtccctggtgcctccagctacatcctctcttggagccccccc
gcagctggtggggagacgaggaggacagtgcctggtactgctagctcccagcaggtttct
gggctgcgcctgggccagagctacaccttcaccctccgcccgttcctggggagcgtgcca
ggtgccgagacctcggtcagcgagcgcacagtctgcagggatgcccgtggtgacattgtc
ttcctggtgcacggcacccgtgacagttcctctggcgctgatgccatccgcaccctcctt
tccaacaccgtgtcctccctggggcgcctgggccctgagggcacacaggtggctctggcc
acatacagctaccgcagcctgccctggctattcctgaaccgctccagcgacctgcctgct
gtgctggagcagatccgtaccatgcgctacgaggagcccagcggcaatgctattggagca
gccataacctttgccaggacctatctgctgagccccaatgcagggcgccggctcaatgtg
ccagcggtgctggtggtcctggctgatggcccttcaggggacgatgccatcactgcagcc
agagatgttaaagctggaggggtccaggtgctagcagtgagtttggagggggcagaccag
gagcagctccggcgcatggtcactggcgaggacccacggtacatctaccgtggtggcagc
accctggcagagctggagggagagctcactgatgacctctgcaccatcatctccaccagg
ccagagccaatgccgaagccctgcactgtgcagtgccccaggggtgagaagggagaacgc
ggtgaggcaggaccacaaggacgagcagggccaccaggcctccctggagagccgggccgt
catgggccacctggccctccaggacccccggggccacggactgtgccagaagataccatc
gagcgtccaggcaagaagggggataggggattccctggagctgatgggacaccaggaagc
cctggccgccctgggaatcctggatcacctggccaaccaggcacccaaggcatccctgga
ccccgaggagatcctggcccacgggggccaacagggctttctggcccgaagggggagaaa
ggagagccgggggagcctggtgtgatcagggatggaggacaggggctgccaggccggaaa
ggagagccaggaacagtgggcagccctggcccccccgggagcccgggcccaaggggacca
tttggtgatccaggtccccctggtccacttggacccatggggccaccaggacctccagga
gagtttgtgaagggagagaaaggtgaccgaggagaaaggggcccccctggactggtggat
ggggcagcacctcgaggggagcctggcctcccgggcctgcctggggaccctgggcctcga
ggacctgctggaccccctggcctcaaaggagagaagggtgatggagcagaaggcttccca
gggctgcctggacgccctggggacccaggagaccggggcccacggggaccaccaggggag
cagggcaggaagggagaccgtggggcaccaggtgacctgggagatatgggcgagaagggg
gaccgtggcatgccaggcccggaggggcagaagggtgaggcaggagtcccagggcgccca
ggaccatcaggcagagagggagctccaggaccagctgggccccgaggggagaagggggag
catggagagaagggtgatgaaggcactccgggtgaagcaggtctgcctggcaaacctgga
gacaggggcccacggggcctccctggctaccgtggtccccctggggagaaaggtgaccca
ggggacccaggtcttgaaggcaggaatggcagccctggagcaccagggagcaagggcgac
cgtggggagccggggcctcctggacctccaggacgaactgctgacatagggctcggagga
gcaggggagaagggtgagaagggggaccctggggaccctggtgaggatggtgcaaagggt
gcccggggcgatgctggctcccctggtgtgcctggagagaggggtgtggagggcccccgt
gggccccctggtgcacggggcgacccaggtgaccgaggactgccaggagagaagggggac
cgtggcccaccagggctggatggccgcaatgggctggaaggcaaacctgggcacccaggc
cccaccgggctgcggggggacccggggaagcaaggggaccctggccgagatggactgcct
gggctgcgtggggagcagggactgcctggccccattggccctgtgggaccacctggcatc
ccgggcaaaccaggcgatgatggcaaacccggcctcaacggcaagaatggagaagatggc
acaccaggagaagatggcagaaagggtgacaaaggtgacacaggaccccctggcagagag
ggccccagtggtgccaaaggcgagcagggggacagaggtgtgccagggccccttggcccc
cctggcatcccagggcaggtcggtcccccaggccagggcttgccaggtgtccgtggggtg
cctggaccaaagggggacccaggggagcctggactgcaaggagagccggggcgacctggc
aaccctggagcacgtggagaccctgggacttcagtgaacattgaacgtagcctggaagca
cttggcatcaagatttcatccctgaaggagctcacgggtgcatatgatgggagctcggac
tcgttcgtgccactgtctgaacggctgcggggccagaagggcagccggggagagccgggg
gagagaggccctccaggtcgagagggctccttaggctttcctggtgagcgaggacccaaa
ggtgacaaaggagaactgggtgcccctggcccccagggccctatgggacgtgctgtgggc
gagcggggtcctgaggggccacccgggcagccaggggagcctggcaagccaggcatccca
ggggtgccaggccgtgctggggagcttggggaggctggcaggcctggtgagaaaggtgac
cgaggcgagaagggtgaccgtggtgaacagggcagagatggcttgcctggtccccctggg
cccccagggcccaaggcagacgtggcagagggcagcctgatggggttcccaggagagcgt
ggccctgctggactcaagggagcgaagggtgagccaggagccgatggcgagaggggaccc
aaaggagataagggcgatggtggctcacggggagaacgaggggagcctggagagaagggc
agggatggtgccccaggcctcccgggtgagagagggctggctggccccgaggggaagccg
ggcttgccaggcttccccggtgtgctgggacgcccgggcagccagggagacccaggacct
ccaggacctccaggcagcactggaccaccagggacccagggaccagctgggaccaagggt
gagccaggggagcctggctctggtgtccggggtttgcctggtccccagggtagcatgggg
ctgcctggccccaccggcccccctggtccagggggtccaccgggtgtcccagggctgcca
ggacaagtgggggagagcgggaagcccggcgtgccaggaagggatggtgtgccagggaag
gatggtgaggctgggatgcctggaaagatgggtatgccaggaccttcaggccctgcaggt
cccaagggagagccaggggatgtcggagccccagggcaggccattgctggccctcctggt
gccaaaggtgagaagggtgagccagcactgctgaaggatctgctgctgggagaacctggc
tccaagggtgagcgaggcttgcccggccccaagggtgagaagggagagccaggaggattt
ggagagccaggggatcctggggaagatggagccaaggggtcctctggagccaaaggagag
aaaggatcaccaggtgtcggtgtgcagggacctccaggacaggacgggcctccaggcttg
aagggtgacattggcttgccaggaccacctggacctccaggtttagcaggcattgctggg
acaccaggacagccgggcctgagaggagataatgggcagcctggcccaccaggtgcccca
ggagagagggggatgattggctttccagggagagatggcacctctggaccaccaggacct
gcagggccccctgggccagctggcatacaaggggcctctggcctgaagggtgacaagggt
gcccctggggctgggctgcctggagccagaggtgagcgtggagacccagggccacggggt
gaagatgggcgcccaggacgagaaggagatcgagggccagctggcttgcctgggaaccgt
ggggagcgtggggacaagggagatgttggggccccagggcccaaaggagacaagggcgat
accgtggtggtggaggggcctgcgggagcacgaggcagcaagggagagccgggtgagcgt
ggcctgaagggcatggaaggggacaagggcgacaagggggagcaaggcatgcctggagag
aagggggtgaggggtgagcaaggcgagaagggctccacaggcttccctggggcacgtggc
cctggtgggcagaagggagaggctggagtgtcaggagagcctggggagccgggccagccc
ggccgtgacggggtccccggagcccgaggagagaagggggacgtaggacctctgggcatg
cgtggtcccaagggtgaccggggcatgaaaggcgcctgtggcctcgatggggacaagggc
gagaagggagagccagggatcccggggcgcgcagggctgccggggaggaaaggcgagccg
ggagagctgggtctgtcgggaccaccgggcatccccgggaaggaggggctcatgggaccc
aagggtgaccggggattcgacgggcagcagggagccaaaggagaccagggggagaaagga
gaccggggtgccccaggcattgtaggtggccctggtccacggggcattgatggtgctcct
ggtccccctggacctccaggaagtgttggcccccgaggtcctgagggcatacagggccag
aagggggagagaggcccccctgggcagtcggtgccagggccccgcggtgtgcctggcatt
ccgggtgagagaggagagcagggcagtcctggcacccaggggttccgtggggagaaaggg
gagccgggcatgagggaggaggagatccgtgcctttgtcaggcaggagatgagccagcac
tgtgcctgtggaggccatttcccacggcgtctggattcacgtgagcactcaggaggctgg
ggggctcaggccaggagtagcctcccctctatccagggaggaggaagaatcgtccgccag
gagaagcagcatggccagacagggctcttccccgctcatcctttccccactggcagtgca
gtccccgtgctgaagttgtcacatgctgaggaagaggagggacaggacatgcaggtcatg
cttaacaccgatgacctagactatgacagtgagtacgatgaggaggaggactatgatgag
ggtctggagatggagcacttggagcagcctgcaatgggtgctgagccctgcggcctgcca
ctggacgagggggactgccagcgctacacactgcggtggtactacaaccaaagagtcacc
gagtgccggcccttcgtctacagcggctgccagggcaacctcaaccgcttcgacagcaag
gaggagtgtgagctgcgctgtgggcagcgcccaggggcaggtgcccatgtcacggccagt
ggcaaggtgggagcgcagccaaaggtgtag
DBGET
integrated database retrieval system
