Pogoniulus pusillus (red-fronted tinkerbird): 135183042
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Entry
135183042 CDS
T10504
Symbol
BLM
Name
(RefSeq) recQ-like DNA helicase BLM
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03440
Homologous recombination
ppus03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135183042 (BLM)
03460 Fanconi anemia pathway
135183042 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppus03032
]
135183042 (BLM)
03400 DNA repair and recombination proteins [BR:
ppus03400
]
135183042 (BLM)
Enzymes [BR:
ppus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
135183042 (BLM)
DNA replication proteins [BR:
ppus03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
135183042 (BLM)
DNA repair and recombination proteins [BR:
ppus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
135183042 (BLM)
Bloom's syndrome complex (BTR)
135183042 (BLM)
FA (Fanconi anemia) pathway
135183042 (BLM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
BDHCT
RecQ_Zn_bind
Helicase_C
BDHCT_assoc
HRDC
RQC
BLM_N
ResIII
UCC1_N
Motif
Other DBs
NCBI-GeneID:
135183042
NCBI-ProteinID:
XP_064013865
LinkDB
All DBs
Position
17:complement(14215850..14241525)
Genome browser
AA seq
1293 aa
AA seq
DB search
MDDFDLSGIEKYCRPPLLSSRGQQVSCVASQRPDKPPGSPGTVGGDHGALESGETLPEAE
HRSSSQQSVIYLEDAAPCSSDRAVGKDAWQDLDADAILVAGREETRSGADRSGERQKLCS
EERHSPSELDEADPELFAGTELAEDDFLDVIPPSPEEELPPFSSTVRSMSNLFKESPTGG
SSTTDSSDSRPGKVATMQPVTKSDPSAEDAGRASQPEQQLYGVMEEICKLVDGIPLSELQ
ALSCAKDLLQKRDLRRKLLVNSVTLNKSCTNTFPWKGDMEQSPLPRPSPAPCPGPSWSFS
SDRTSPKSTSLLRNSPKSTNLLSGTLNSSSFSTQKNQTLGSSYASEPSVQQVPCPGTTTV
SSPKGNGTGKASLSLHSEMSFNSSWSEKAGVRGTGNHPLLERPLTSTALRAPSRAPAGLP
AEDTQAVNDADLDLDHFDIDDFDDDWEDLVNVSAPETQPYQPIREGPPARSLLSKIMSRA
KGPAAVSSPAAPKSGFSVAAKSPSDPQVYNPALERFRGMKFSHSEEMMTVFHKKFGLHCF
RTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACLSAGVTIVISPLRSLIIDQVQKLK
TLDIAATYLTGDRTDTDASKIYMQLSKKDPVIKLLYVTPEKVCASNRLMSALENLYDRKL
LERFVIDEAHCVSQWGHDFRPDYKRLNVLRKKFRSVPMMALTATANPRVQKDIQNQLEML
KPQVFTMSFNRHNLKYDVLPKKPKKVAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAIL
QKEGLAALAYHAGLTDSNRDLVQKKWINQEGCQVICATIAFGMGIDKPDVRYVIHASLPK
SIEGYYQESGRAGRDGEMSHCLLFYSYSDVTRLRRLIMMEKDGNSHTRQTHFNNLYSMVH
YCENVVDCRRIQLLAYFGETNFNPTFCKDHPEVICDNCSRKKDYKTRNVTEEVKSIVRFV
QQHCGQGQRGNGRKSTGSGRYTLNMMVDIFLGKTSAKIQSGIFGKGAAYSRHNGERLFRK
LVLDKILDEDLYITANDQAVAYVILGERAQAVLDGALQVEFHETESASDIRKQRASMAKM
SKREEMVKKCLGELTDTCKTLGKVFDVHYFNIFSTSALKKIAETLSSDVEVLLQIDGVTE
DKLEKYGAEIIKVMEKYSEWTTPEDAPCPSVDTATGSPGSPESDEEAEGGVTTSSYFSSN
ANQRRKRKRPPNFRESKRKKTSNGGSQQFHPRGSYGKHRRTKKPRGSKASAASGSSSVSY
SVSATQGAAGRLGIMAPPKPKARHFLQPSYSVF
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggatgactttgacttgtcaggaattgaaaagtactgcaggccaccgctcctgtcctcc
agagggcagcaggtctcctgcgtggcctcccagaggccagacaagccacctggctctcct
ggcactgtgggtggtgaccatggtgctttggagagtggagagacattaccagaggctgag
caccggtcttcatctcagcaatctgtgatctaccttgaggatgccgctccctgcagcagt
gacagggctgtgggcaaggacgcttggcaggatttagatgctgatgcgattttggttgct
ggcagggaggagactcgctcaggtgctgacagaagtggtgagaggcagaagctgtgcagt
gaggaaaggcacagcccctcagagctggatgaggctgaccctgagctgtttgcaggcaca
gagctcgcagaggatgatttcctggatgttattcctccctctcctgaagaggagctgcct
cccttctcatccactgtgagaagcatgagtaaccttttcaaagagtctcctactggtgga
agttccacaactgacagcagtgactccaggcctgggaaggtggccaccatgcagccagtc
actaaaagtgaccccagtgcagaggatgcagggagagcctcccagccagagcagcagctg
tatggtgtcatggaggagatctgcaagctggtggatggcatcccactgagtgagcttcag
gctctgtcctgtgccaaagaccttctccagaagcgagacctcaggagaaaattgctggtt
aactctgtcaccttgaacaaaagctgcacaaatactttcccttggaagggggacatggaa
cagagccctctcccacgtcccagtcctgctccatgtcctggtcccagctggagcttcagt
tctgacagaacctcacccaaatccaccagcctgcttagaaactcacccaaatccaccaac
ctgctttctgggactcttaattcaagcagtttttctacccagaagaatcaaactttgggc
agctcttatgcttcagagccaagtgttcagcaggttccctgccctggaactacaacagtg
tcttctcccaagggaaatggcacagggaaggcttccctcagcctccactccgagatgtcc
ttcaacagcagctggagtgagaaagcaggggtgaggggcactgggaaccatcctctgctg
gagcggcccctgaccagcacagctctgagagctccaagcagagcccctgctgggcttcct
gcagaggacactcaggctgtgaatgatgcagaccttgaccttgatcactttgacattgat
gattttgatgatgattgggaggatctggtgaatgtgtcagcacctgagacacagccctac
caacccatcagggaagggccacctgccagatcactcctatcaaagatcatgtccagagcc
aaaggacctgctgctgtatccagtcctgctgctccaaaatcaggcttctccgtggcagcc
aagagcccttcagacccacaggtttataaccctgcactggagcgtttcaggggcatgaag
ttctcccactctgaggaaatgatgactgtgtttcacaagaagtttggtttgcactgcttc
aggacaaaccagctggaggccatcaatgctgctctcctgggtgaagattgcttcatctta
atgcccactggtggtggcaaaagcctgtgctaccagttaccagcctgtctctctgctgga
gtcaccattgtcatctccccgctgaggtcactgatcatagaccaggtgcagaagctgaag
actttagatattgctgcaacatacctgactggtgacagaacagatacagatgcttcaaag
atctacatgcagctgtccaagaaggatcctgtgataaagctcctctacgtcacccccgag
aaggtttgtgccagcaaccgactgatgtcagccctggaaaatctctatgacaggaagctc
ctggaacgttttgtcattgatgaggcccactgtgtcagccagtggggccacgattttcga
cctgactacaaacgcctgaacgtcctgcgcaagaagtttcgctccgtccccatgatggct
ctgacagccactgctaaccccagggtgcagaaggacatccagaaccagctggagatgcta
aaaccacaagtgtttacaatgagcttcaacaggcataacttgaaatatgatgtgctgccc
aagaagccaaagaaggtggcaatggattgcttggaatggatcaaaaaatatcatccacat
gactctggaatcatttactgcctctcgcgtcacgagtgtgacacaacagcagctatcctg
cagaaggaaggtctggctgcacttgcctaccatgctggcctcactgactccaacagagat
ctggtgcagaagaagtggattaatcaagaaggatgtcaggtcatatgtgccaccatcgcc
tttggaatgggaattgacaagcccgatgtgcgctatgtgatccacgcttccctccccaaa
tccatagagggttactaccaggagtctggcagagctgggcgagatggggagatgtcccac
tgcctgctcttctacagctacagcgacgtcaccaggctcagaaggttaataatgatggag
aaagatgggaacagtcacaccagacagacccacttcaacaacctctacagtatggttcac
tactgtgagaacgtggtggactgcaggaggatccagctcttggcctactttggggaaaca
aattttaatcccaccttttgcaaagatcacccagaagtcatctgtgataactgcagtagg
aagaaggattacaaaacaagaaatgtaacagaggaggtgaagagcatcgtcaggtttgtg
cagcagcactgtgggcaagggcaacgagggaatggaaggaaaagcacagggtctgggagg
tacacactgaacatgatggtggacatcttcctgggtaaaaccagcgccaagattcagtct
ggaatatttgggaagggagctgcctactccaggcataatggtgaaaggctcttcagaaaa
ctggtcttggacaagatcctggatgaagatttgtacatcacagctaatgaccaggcagtg
gcttatgtgatcctaggagaaagagctcaggctgtgctagatggagccctgcaggtggag
ttccatgagacagaaagtgccagtgatatcagaaagcagagagcttccatggcaaagatg
tccaagagggaagagatggtcaaaaagtgccttggagaacttacagacacatgcaaaacg
cttgggaaggtctttgatgtgcattacttcaacattttcagtacctcagctctgaagaaa
atagcagaaaccctgtcctcagatgtggaggttttactgcagattgatggtgtcacagaa
gacaaactggaaaaatatggtgcagagataattaaagtgatggagaagtattcggaatgg
accacaccagaggatgctccctgccccagtgtggacacagccacaggaagccctggcagc
cctgagagcgatgaggaggctgaaggtggggtcacaacctccagctacttttccagtaat
gcaaaccaaagaaggaaaaggaaaaggccaccaaacttcagagaatccaagaggaaaaag
accagtaatggtggcagccagcagttccatcccaggggcagctacggcaagcaccgaagg
accaaaaagccacgaggctccaaggcttcagccgcctctggcagcagctcggtgtcctac
agcgtcagtgccactcaaggagctgctggaaggctggggatcatggcaccacccaaaccc
aaagccaggcacttccttcagccttcatactcagtcttctga
DBGET
integrated database retrieval system
