Pogoniulus pusillus (red-fronted tinkerbird): 135183353
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Entry
135183353 CDS
T10504
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppus04121
]
135183353 (SHPRH)
Enzymes [BR:
ppus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135183353 (SHPRH)
Ubiquitin system [BR:
ppus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135183353 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
TPR_10
TPR_12
PEP-utilisers_N
TPR_2
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
135183353
NCBI-ProteinID:
XP_064014334
LinkDB
All DBs
Position
18:complement(4535617..4609603)
Genome browser
AA seq
1688 aa
AA seq
DB search
MSSRRKRAPPSKLDEEKKKKLCWDMHQDRRNDITLDDDLSNEDHVAGPSSSSAPFIVIND
DSTDEDLIQKEGSGLKSVKFLTVNDEEDSYSILTPVSVQLNIIVLPYRADGAWKALLGEF
ALHLPSEQILTDGFHERGFTLMRGDSDDQLQICVHEKSEEEYSNETKEYMGAYEQCILVE
PTLGGEILEGLRWLQKKKIIGLYQRPREAQALKVGIYLLEAGLSKPEFLSDGGGRPKKAN
QLIQKLMEKFYSFLIPDELEEDEEESDIELERQNIEELYDFVRHTHQQDIQLLREDVQHP
ALIPILRPYQSEAVNWMLHQENHTNTPSDENALHFLWREVITLDGVKIYYNPFTGCVIRE
YPSAGPQWPGGILADEMGLGKTVEVLALILTHTRPDIKQDDLMLPEGKLVNFFVPPQPLE
GNKKKMPREMELKLKEKIQYPSLRVMILAAVKEMNVKKGASIVAIFKYISAIYRYDIQRN
RRLLKRTLEKLIAEQVVEQVRGHGLAGSFKLGKNYKEQKRREKIKEKIARTSESIQQKQV
KDAKTQTKESGNNDVTPENVFKTPLGVDVTMEEHDYCTTSKSNRKPEVDPENSVKDNSVQ
QEAVGSKSPDLCVSSDTGSHPSFGVPKTTADVLSDQSSRSQGHASSSVQHTSSVFPFNTS
EYRFECICGELGLADYKARVQCLKCYLWQHAECVNYKEENLKIKPFYCPHCLVAMKPVPT
GATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPHMLAEQDVVITTYDVL
RTELNYVDIPHSNSKDGRRFRNQKRYMAIPSPLVAVEWWRICLDEAQMVECTTAKAAEMA
LRLSGINRWCVSGTPVQRGLEDLYGLVLFLGVDPYWVKHWWDQLLYQPYCRKNPHPLYSL
IAKIMWRSAKKDVLDQIQIPPQTENVHWLHFSPVERHFYHRQHEVCCQDALAKLRKISDW
TLKLSSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCRTE
CEEAHRQLVCALNGLAGIHIIKGEYASAAELYREVLRSSEEHKEKLKTDSLQRLHSTHNL
MELLLAKHPGIPPTLRDSRLAEEAEQLRQHYMSKSNAEVAEAHQALQPVLQTIRELQRKI
HSGSPWWLDVIQTAIQYAIDEELVQRVQNEITCNYKQQTNKLSMAEKFRDCRGLQYLLTV
QLEEVKKFQKIVREAVKNLEGPPSKQVIEAATICHLRPVRLPLNNCVFCKADELFTEYES
KLFSHTVKGQMAIFEEMIEDEEGLVDDRLPTTSRGLWATSETERALKAILSFAKAHRMDA
KLTEEGSAFLELFEAWKKEYKLLHEYWMVLRDHVSAIDELAMATERLRVRHPDEPKPNPP
VLHIIEPHEVEQNRVKLLNDKAVAKSQLQKKLGQLLYLTNLEKSQDKTTGGINPEPCPIC
ARQLGKQWAVLTCGHCFCNECIAIIIEQYSVGTRRSSIKCAICRQTTSHKEISYVFTAES
ANQEDDIPVKGSHSTKVEAVVRTLKKIQCKDPGAKSLVFSTWQDVLDIISKALYDNNMIF
SQINGISKFQENLSAFKYDPNINILLLPLHTGSNGLNIIEATHVLLVEPILNPAHELQAI
GRVHRIGQTKSTIVHRFLIKATIEERMQTMLKTVDRSHTSSSMKQSEASVLTVADLADLF
TEETEELE
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgtcgaaaacgtgcacctccatcaaaattggatgaggagaagaagaaaaag
ctctgctgggatatgcatcaagacaggagaaatgacataacattagatgatgatttgagt
aatgaggaccacgttgcaggtccaagctcttcttctgcacccttcattgttataaatgat
gacagcactgatgaagatctcattcaaaaagaaggcagtggtttaaaatctgtcaagttt
ttgacagttaatgacgaagaggactcttactccatcttgactcctgtatcagtacaacta
aatattatagtcttgccataccgtgcagatggggcctggaaagccttgttgggagaattt
gctcttcatcttccttctgagcaaattctaactgatggattccatgaaaggggctttact
ctaatgagaggagactctgatgatcagctgcagatctgtgttcatgaaaaaagtgaagaa
gagtacagtaacgaaacaaaagaatacatgggtgcttatgagcaatgtattttggtggaa
ccaactttaggtggtgaaatactggaaggcttgaggtggctgcaaaagaaaaagataatt
ggactttatcaaaggcctagagaggctcaggctttaaaggttggcatataccttctggaa
gctgggctaagtaaaccagagtttcttagtgatggaggtggaaggccaaaaaaagctaat
cagctgattcagaagctcatggaaaagttctatagttttttaattccagatgagctggaa
gaagatgaggaagaatctgacatagaactagagcgacaaaatatcgaagagctttatgac
tttgtgaggcacacccatcagcaggacatccagttactgagagaggacgtgcagcatcct
gcattaattcctattctgaggccataccaaagtgaggctgtgaactggatgcttcaccaa
gagaaccacacaaacactccaagtgatgaaaatgcattgcacttcttatggcgggaggtc
atcactctggatggagtaaaaatctactataatccatttactggctgtgttatccgtgaa
tatccgagtgctggacctcagtggcctggaggtattttggcagatgagatgggtcttgga
aaaacagtggaagtcttggctctcattctgactcatacccgaccagacattaaacaagat
gatctgatgttacctgagggtaagcttgtaaacttctttgttccacctcaacctttagaa
ggaaataaaaagaaaatgccaagggaaatggagcttaaattgaaggaaaaaatacaatat
cctagtttacgagtaatgatattagcagccgtgaaggaaatgaatgtgaagaaaggagca
tctattgttgcaatatttaagtacatcagtgctatctataggtatgacatacagagaaat
agacgacttctcaaaagaactttagagaaactaattgcagaacaagtagtagagcaagtc
agaggccatggtctggctggatctttcaagctggggaagaattacaaggagcagaagagg
cgagaaaagatcaaagagaagatagcaaggacttcagaaagcattcagcagaagcaggtc
aaggatgctaaaactcaaaccaaggaatcaggaaataatgatgtcactcctgaaaatgtc
tttaaaaccccattaggggtggatgtcaccatggaagaacatgattattgtacaactagc
aaaagtaacaggaaacctgaagtggatcctgagaattctgtgaaagataatagcgttcag
caggaagctgtgggctcaaagtctcctgatttgtgtgtctccagtgacacaggcagtcac
cccagttttggtgttcctaaaactacagctgatgtcctgagtgaccagtcctcacgttcc
caaggacatgccagcagcagcgtacaacataccagttctgtatttccgtttaacacctct
gagtatcgttttgaatgcatctgtggggagcttggattggctgactataaagctcgtgtg
cagtgcctgaaatgttacttatggcagcatgcagaatgtgtaaactacaaggaggaaaac
ctgaagatcaagcccttctactgtccccattgcctcgtggcaatgaaaccagttcctaca
ggagcaactctgataatttctccaagttctatttgtcatcagtgggtagatgaaatcaac
agacatgtaagatcatcctctcttcgagtgctggtgtatcagggtgtgaagaagcatggc
tttctgcagccacacatgttggcagagcaggatgtggtcattaccacatacgatgtcctc
cgcaccgagctgaactacgtagatataccccacagtaacagcaaggacggacggcgtttc
aggaaccagaagaggtacatggccatcccaagccccttggtagcagtggaatggtggagg
atctgccttgatgaagcacagatggttgagtgcactactgcaaaggctgctgaaatggca
ctccgtttaagtggaatcaatcgctggtgtgtcagcggcactcctgtgcaacgaggatta
gaagatctctatggattagtcctttttcttggagttgatccttactgggtcaaacattgg
tgggaccagcttttatatcaaccttactgtaggaaaaatcctcatcctctctacagtcta
attgccaagataatgtggagatcagccaagaaggatgtgcttgaccaaattcagatcccc
cctcagacagaaaatgtacactggcttcacttttctcctgtggagagacacttctatcat
cgccagcatgaagtgtgctgccaagatgcgttggcaaaactcaggaagatttcagactgg
actcttaagcttagtagcctggatagaaggactgtgacttctattctgtaccctttgctg
cggctgaggcaggcctgctgtcatccacaggctgttcgaggagagttcttgccattacag
aaaagcaccatgaccatggaggaactgttaacctctctgcagaaaaaatgtcgaactgag
tgtgaggaagctcacagacagttggtgtgtgctcttaatggcttagctggtatccatatc
attaaaggagaatatgcgtcggctgctgagctgtacagagaagtgttacgatcgtctgaa
gagcacaaagaaaagctcaaaacagattcattgcaaagacttcactctacacacaatttg
atggaattgttgttggcaaagcacccaggaattcccccgactctgcgtgatagcaggctt
gcagaagaggcagaacaacttcgacaacactatatgagtaaatccaacgcagaagttgca
gaagcccatcaggctttgcagccagttcttcagaccattcgggagctccagagaaagatc
cattcaggttctccttggtggttggatgtcatccagacagcaatacagtatgctattgat
gaagaacttgttcagcgtgtgcaaaacgaaataacctgcaactataaacagcagactaat
aaactctccatggcagagaaattccgtgactgcagaggccttcagtacctgctcacggtg
cagctggaggaagtgaagaagttccagaagattgtaagagaagcagtgaagaacttagaa
ggccctccctcgaagcaggttatcgaggctgccactatctgccatttgcgacctgttaga
cttccacttaacaactgtgtcttttgtaaggctgatgagttgttcacagaatacgagtcc
aagctcttttctcacactgttaaaggccaaatggcaatatttgaagagatgatagaagat
gaagaagggctcgttgatgaccgtttgccaaccacaagcagagggctgtgggccaccagt
gaaactgaacgtgccttgaaagctattctctcctttgccaaagctcaccgaatggatgct
aagctaactgaagaaggcagcgcatttctggaactgtttgaagcatggaaaaaggaatat
aagttgcttcatgaatattggatggtgcttagggatcatgtttctgctattgacgagctg
gcaatggctacagaacggctgagagtgcgtcatcccgatgagccaaaaccaaacccacca
gttctccacatcatagaaccacatgaggtagagcaaaatcgagtgaagcttttgaatgac
aaggcagttgccaaatcgcagcttcagaagaaactaggacaacttctgtatctcactaat
ctggagaaatctcaggataaaactactggagggattaacccagaaccatgtccaatatgt
gcacgtcaactaggaaagcagtgggcagtgctgacctgtgggcattgtttttgtaacgag
tgcatagcaatcatcatagaacagtacagcgttggcacccgccggagctccattaaatgt
gccatttgcaggcagacaacttctcataaggaaatatcctatgtcttcactgcagagtct
gcaaatcaggaggatgatattcctgtaaagggaagtcactccaccaaagtggaagcagtg
gtccggacactgaagaaaattcaatgtaaagatccaggggctaaatccttagttttctca
acgtggcaagatgtgttggatatcatttcaaaagctttgtatgacaacaacatgattttt
tctcagatcaacggaatcagtaaatttcaggaaaatctctctgcatttaaatatgatcca
aacattaacattttgctgctgcctcttcacactggttccaatggactgaacatcatcgaa
gcaactcatgttctgcttgtggaacccattctgaatcctgcacatgagctacaggctatt
ggcagagttcatcgtattggccaaacaaaatctaccatcgttcacaggttcctgataaaa
gcaacaatagaagagagaatgcagactatgctgaaaactgtagatagaagccacacgagc
tcttccatgaagcagtcagaagcctcagttctgacagtggcagatttggctgaccttttt
acagaagaaactgaagagcttgagtaa
DBGET
integrated database retrieval system
