Pogoniulus pusillus (red-fronted tinkerbird): 135183558
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Entry
135183558 CDS
T10504
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppus04131
]
135183558 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppus04812
]
135183558 (SPAST)
Enzymes [BR:
ppus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
135183558 (SPAST)
Membrane trafficking [BR:
ppus04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
135183558 (SPAST)
Cytoskeleton proteins [BR:
ppus04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
135183558 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
TIP49
AAA_5
AAA_16
Mg_chelatase
AbLIM_anchor
AAA_14
MIT
IstB_IS21
AAA_24
NPHP3_N
DUF815
nSTAND3
AAA_2
Motif
Other DBs
NCBI-GeneID:
135183558
NCBI-ProteinID:
XP_064014766
LinkDB
All DBs
Position
18:20903766..20936185
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AA seq
613 aa
AA seq
DB search
MNSPGGRGKKKGSAGSSSAPPAAGASPSSPPGPGPPVPPAGAAAAAASPHKRNLYYFSYP
LFAAFALLRFVAFQLGLFFAWLCERLSRGALMASKGSRAGAGDALEPGGAPETVRACHKR
AFECISMALRIDEDERAGQKEQAVEWYKKGIEELEKGIAVLVIGQGDHYERARRLQAKMT
TNLAMAKDRLQLLEKLQAVLQISKPQMEVYNDSTNLACRNGHLQSESGAVPKKKDPLTHT
SNSLPRSKTVAKTGSIGLSGHHRTPSCSGISTSVSRPAPNPPASTHKAVPKNNRTNKPST
PTTAPRKKKEVKRFRNVDSNLANLILNEIVDSGPAVKFDDIAGQELAKQALQEIVILPSL
RPELFTGLRTPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLV
RALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVM
GATNRPQELDDAVLRRFTKRVYVSLPNEETRLVLLKTLLSKQGSPLTQKELAQLARMTDG
YSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIKLSDFTESLKKIKRSLSPQTLEA
YIRWNKDFGDTTV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggtggcagagggaagaagaagggctcagccggctccagctccgcgccc
ccggctgccggggcttcaccctcctcgccgcccgggccaggcccccccgtgccgccggcg
ggggcggcggcagcagcggcgtccccccacaagaggaacctgtactacttctcgtacccg
ctctttgcagccttcgccctgctccgcttcgtcgccttccagctgggcctgttcttcgcc
tggctctgcgagcgcctctcccgtggtgcccttatggcatccaagggcagcagggccggg
gccggcgacgctcttgagcccggcggggcgcccgagacggtgcgggcctgtcacaagcgg
gccttcgaatgcatctccatggcgctgcgtatcgacgaggacgagagagcaggacaaaag
gaacaagctgttgaatggtataagaaaggaattgaagaactggaaaaaggaatagctgtc
ttagtaattggtcaaggtgatcactacgaacgggctcgacgtctgcaggctaaaatgacg
acaaatttggcaatggccaaggatcgcttgcagcttttagagaagctgcaggcagttttg
caaatttccaagccgcaaatggaggtctataatgacagtactaacctggcatgccgcaat
ggacatctccagtcagaaagtggagcagttccaaaaaagaaggatcccttaacacacact
agtaattctcttcctcgttccaaaactgttgcaaaaactggatccataggcctttctggt
caccatagaacacctagctgcagtgggatatcaacttctgtgtcaagaccagcacccaat
cctccagcttcaactcataaggctgttcctaaaaataacagaacgaataaaccttctact
cctaccactgctcctcggaaaaagaaagaagtgaagagatttagaaatgtagacagtaat
cttgccaatcttatcctgaatgaaattgttgatagtgggccagctgtcaaatttgatgat
atcgcagggcaggagctggctaaacaagctttacaagaaattgttatccttccttctctt
agacctgagttatttacagggcttagaactcctgcacgtggtttattgctgtttggccca
ccaggaaatgggaagacaatgttggccaaggcagttgctgcagaatcaaatgctactttc
ttcaatataagtgcagcaagcctaacttcaaaatatgtaggtgaaggggagaaactggtt
cgtgctttatttgcagtagccagagaacttcagccttctataatttttattgatgaagtt
gacagccttctgtgtgaaagaagagaaggtgaacatgatgctagtaggcgtctgaaaaca
gagtttttaatagaatttgatggtgtgcagtcttctggagaggatagaatacttgtgatg
ggagcaacgaacaggccacaggagcttgatgatgctgttctgagacggttcaccaaacga
gtatatgtgtctttaccaaatgaggaaacaagactggttttgctgaaaactcttctaagc
aaacaaggaagcccattaacacaaaaagagttagcacaactagctagaatgacagatgga
tattctggcagcgatttaactgcattagcaaaggatgcagcactgggccctattcgagaa
ctaaaaccagaacaggtgaagaacatgtctgccagtgagatgagaaatatcaaactatca
gacttcactgagtctttgaagaagataaagcgcagtttgagccctcagaccttggaagca
tatattcgctggaacaaggactttggagacaccacagtgtga
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